RNA–Protein interactions for RNA: ENST00000589980.1

ABCA8-212, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-212ENST00000589980 PREX2Q70Z35 1606 aa11.8□□□□□ -0.52
ABCA8-212ENST00000589980 ABCC1P33527 1531 aa11.8□□□□□ -0.52
ABCA8-212ENST00000589980 SIGLEC1Q9BZZ2 1709 aa11.8□□□□□ -0.52
ABCA8-212ENST00000589980 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
ABCA8-212ENST00000589980 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
ABCA8-212ENST00000589980 AGLP35573 1532 aa11.79□□□□□ -0.52
ABCA8-212ENST00000589980 CNTLNQ9NXG0 1405 aa11.78□□□□□ -0.52
ABCA8-212ENST00000589980 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
ABCA8-212ENST00000589980 PLEKHH2Q8IVE3 1493 aa11.77□□□□□ -0.52
ABCA8-212ENST00000589980 NLRP6P59044 892 aa11.77□□□□□ -0.53
ABCA8-212ENST00000589980 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
ABCA8-212ENST00000589980 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
ABCA8-212ENST00000589980 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
ABCA8-212ENST00000589980 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
ABCA8-212ENST00000589980 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
ABCA8-212ENST00000589980 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
ABCA8-212ENST00000589980 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
ABCA8-212ENST00000589980 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
ABCA8-212ENST00000589980 ITSN2Q9NZM3 1697 aa11.75□□□□□ -0.53
ABCA8-212ENST00000589980 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
ABCA8-212ENST00000589980 CDC42BPBQ9Y5S2 1711 aa11.74□□□□□ -0.53
ABCA8-212ENST00000589980 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
ABCA8-212ENST00000589980 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
ABCA8-212ENST00000589980 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
ABCA8-212ENST00000589980 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
ABCA8-212ENST00000589980 CCNB3Q8WWL7 1395 aa11.74□□□□□ -0.53
ABCA8-212ENST00000589980 KIAA1107Q9UPP5 1409 aa11.74□□□□□ -0.53
ABCA8-212ENST00000589980 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
ABCA8-212ENST00000589980 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
ABCA8-212ENST00000589980 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
ABCA8-212ENST00000589980 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
ABCA8-212ENST00000589980 G3V3G9 751 aa11.71□□□□□ -0.53
ABCA8-212ENST00000589980 PPP1R37O75864 691 aa11.71□□□□□ -0.53
ABCA8-212ENST00000589980 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
ABCA8-212ENST00000589980 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
ABCA8-212ENST00000589980 PTPRTO14522 1441 aa11.7□□□□□ -0.54
ABCA8-212ENST00000589980 NPATQ14207 1427 aa11.7□□□□□ -0.54
ABCA8-212ENST00000589980 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
ABCA8-212ENST00000589980 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
ABCA8-212ENST00000589980 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
ABCA8-212ENST00000589980 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
ABCA8-212ENST00000589980 ATP7AQ04656 1500 aa11.69□□□□□ -0.54
ABCA8-212ENST00000589980 KIDINS220Q9ULH0 1771 aa11.69□□□□□ -0.54
ABCA8-212ENST00000589980 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
ABCA8-212ENST00000589980 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
ABCA8-212ENST00000589980 A2MP01023 1474 aa11.68□□□□□ -0.54
ABCA8-212ENST00000589980 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
ABCA8-212ENST00000589980 C3P01024 1663 aa11.67□□□□□ -0.54
ABCA8-212ENST00000589980 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
ABCA8-212ENST00000589980 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
ABCA8-212ENST00000589980 SNPHO15079 494 aa11.66□□□□□ -0.54
ABCA8-212ENST00000589980 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.54
ABCA8-212ENST00000589980 NCOA1Q15788 1441 aa11.65□□□□□ -0.54
ABCA8-212ENST00000589980 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
ABCA8-212ENST00000589980 INO80Q9ULG1 1556 aaPredicted RBP11.65□□□□□ -0.54
ABCA8-212ENST00000589980 PLXNC1O60486 1568 aa11.64□□□□□ -0.55
ABCA8-212ENST00000589980 RTEL1-TNFRSF6BF6WH68 1400 aa11.64□□□□□ -0.55
ABCA8-212ENST00000589980 GGT6Q6P531 493 aa11.64□□□□□ -0.55
ABCA8-212ENST00000589980 SETD1BQ9UPS6 1966 aaKnown RBP11.64□□□□□ -0.55
ABCA8-212ENST00000589980 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
ABCA8-212ENST00000589980 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
ABCA8-212ENST00000589980 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
ABCA8-212ENST00000589980 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
ABCA8-212ENST00000589980 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
ABCA8-212ENST00000589980 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
ABCA8-212ENST00000589980 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
ABCA8-212ENST00000589980 CCDC141Q6ZP82 1450 aa11.6□□□□□ -0.55
ABCA8-212ENST00000589980 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
ABCA8-212ENST00000589980 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
ABCA8-212ENST00000589980 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
ABCA8-212ENST00000589980 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
ABCA8-212ENST00000589980 KIF3CO14782 793 aa11.58□□□□□ -0.56
ABCA8-212ENST00000589980 TSPY4P0CV99 314 aa11.58□□□□□ -0.56
ABCA8-212ENST00000589980 TSPY10P0CW01 314 aa11.58□□□□□ -0.56
ABCA8-212ENST00000589980 ZNF644Q9H582 1327 aaPredicted RBP11.58□□□□□ -0.56
ABCA8-212ENST00000589980 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
ABCA8-212ENST00000589980 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
ABCA8-212ENST00000589980 CLTCQ00610 1675 aaKnown RBP11.57□□□□□ -0.56
ABCA8-212ENST00000589980 CEP170BQ9Y4F5 1589 aaPredicted RBP11.57□□□□□ -0.56
ABCA8-212ENST00000589980 ZNF142P52746 1687 aaPredicted RBP11.56□□□□□ -0.56
ABCA8-212ENST00000589980 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
ABCA8-212ENST00000589980 CAMSAP2Q08AD1 1489 aa11.56□□□□□ -0.56
ABCA8-212ENST00000589980 TCOF1Q13428 1488 aaKnown RBP11.56□□□□□ -0.56
ABCA8-212ENST00000589980 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
ABCA8-212ENST00000589980 KIF3BO15066 747 aa11.55□□□□□ -0.56
ABCA8-212ENST00000589980 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
ABCA8-212ENST00000589980 A2ML1A8K2U0 1454 aa11.55□□□□□ -0.56
ABCA8-212ENST00000589980 NCKAP5LQ9HCH0 1330 aa11.55□□□□□ -0.56
ABCA8-212ENST00000589980 WASHC2CQ9Y4E1 1318 aa11.55□□□□□ -0.56
ABCA8-212ENST00000589980 DISP3Q9P2K9 1392 aa11.54□□□□□ -0.56
ABCA8-212ENST00000589980 TNRQ92752 1358 aa11.54□□□□□ -0.56
ABCA8-212ENST00000589980 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
ABCA8-212ENST00000589980 PZPP20742 1482 aa11.53□□□□□ -0.56
ABCA8-212ENST00000589980 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
ABCA8-212ENST00000589980 GPR153Q6NV75 609 aa11.52□□□□□ -0.57
ABCA8-212ENST00000589980 HS3ST6Q96QI5 342 aa11.52□□□□□ -0.57
ABCA8-212ENST00000589980 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
ABCA8-212ENST00000589980 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
ABCA8-212ENST00000589980 ARHGEF5Q12774 1597 aa11.52□□□□□ -0.57
ABCA8-212ENST00000589980 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms