RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 SENP3Q9H4L4 574 aaPredicted RBP25.95■■□□□ 1.75
DNMT1-215ENST00000588913 RIMS2Q9UQ26 1411 aa25.95■■□□□ 1.75
DNMT1-215ENST00000588913 NUTM2DQ5VT03 806 aaPredicted RBP25.95■■□□□ 1.74
DNMT1-215ENST00000588913 ZNF335Q9H4Z2 1342 aaPredicted RBP25.94■■□□□ 1.74
DNMT1-215ENST00000588913 STRCP1A6NGW2 1772 aa25.92■■□□□ 1.74
DNMT1-215ENST00000588913 NEXMIFQ5QGS0 1516 aa25.89■■□□□ 1.74
DNMT1-215ENST00000588913 EID1Q9Y6B2 187 aa25.88■■□□□ 1.73
DNMT1-215ENST00000588913 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
DNMT1-215ENST00000588913 ANKRD30BQ9BXX2 1392 aa25.86■■□□□ 1.73
DNMT1-215ENST00000588913 CCDC144AA2RUR9 1427 aa25.86■■□□□ 1.73
DNMT1-215ENST00000588913 SPATA31E1Q6ZUB1 1445 aa25.84■■□□□ 1.73
DNMT1-215ENST00000588913 NRXN3Q9Y4C0 1643 aa25.84■■□□□ 1.73
DNMT1-215ENST00000588913 SLC26A8Q96RN1 970 aa25.83■■□□□ 1.73
DNMT1-215ENST00000588913 PLEKHG1Q9ULL1 1385 aa25.82■■□□□ 1.72
DNMT1-215ENST00000588913 ZNF326Q5BKZ1 582 aaKnown RBP25.82■■□□□ 1.72
DNMT1-215ENST00000588913 PPLO60437 1756 aa25.81■■□□□ 1.72
DNMT1-215ENST00000588913 ADAMTS13Q76LX8 1427 aa25.8■■□□□ 1.72
DNMT1-215ENST00000588913 IFT172Q9UG01 1749 aa25.79■■□□□ 1.72
DNMT1-215ENST00000588913 PPP1R15AO75807 674 aaPredicted RBP25.78■■□□□ 1.72
DNMT1-215ENST00000588913 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
DNMT1-215ENST00000588913 RGL3Q3MIN7 710 aa25.76■■□□□ 1.71
DNMT1-215ENST00000588913 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.76■■□□□ 1.71
DNMT1-215ENST00000588913 SETBP1Q9Y6X0 1596 aa25.74■■□□□ 1.71
DNMT1-215ENST00000588913 BCANQ96GW7 911 aa25.72■■□□□ 1.71
DNMT1-215ENST00000588913 SETD1AO15047 1707 aaKnown RBP25.71■■□□□ 1.71
DNMT1-215ENST00000588913 DHX57Q6P158 1386 aaKnown RBP25.71■■□□□ 1.71
DNMT1-215ENST00000588913 CHD2O14647 1828 aaKnown RBP25.71■■□□□ 1.71
DNMT1-215ENST00000588913 XIRP1Q702N8 1843 aaKnown RBP25.7■■□□□ 1.71
DNMT1-215ENST00000588913 HDGFP51858 240 aaKnown RBP25.7■■□□□ 1.7
DNMT1-215ENST00000588913 NWD1Q149M9 1564 aa25.69■■□□□ 1.7
DNMT1-215ENST00000588913 CPS1P31327 1500 aa25.69■■□□□ 1.7
DNMT1-215ENST00000588913 LRRC7Q96NW7 1537 aa25.68■■□□□ 1.7
DNMT1-215ENST00000588913 ADGRF5Q8IZF2 1346 aa25.68■■□□□ 1.7
DNMT1-215ENST00000588913 DIP2AQ14689 1571 aa25.67■■□□□ 1.7
DNMT1-215ENST00000588913 PTPRUQ92729 1446 aa25.67■■□□□ 1.7
DNMT1-215ENST00000588913 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
DNMT1-215ENST00000588913 TBX22Q9Y458 520 aa25.66■■□□□ 1.7
DNMT1-215ENST00000588913 METP08581 1390 aa25.64■■□□□ 1.69
DNMT1-215ENST00000588913 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
DNMT1-215ENST00000588913 KCNA6P17658 529 aa25.62■■□□□ 1.69
DNMT1-215ENST00000588913 RBM33Q96EV2 1170 aaKnown RBP25.62■■□□□ 1.69
DNMT1-215ENST00000588913 VGFO15240 615 aaPredicted RBP25.61■■□□□ 1.69
DNMT1-215ENST00000588913 XRN1Q8IZH2 1706 aaKnown RBP25.6■■□□□ 1.69
DNMT1-215ENST00000588913 SIN3AQ96ST3 1273 aa25.6■■□□□ 1.69
DNMT1-215ENST00000588913 IQSEC2Q5JU85 1478 aa25.59■■□□□ 1.69
DNMT1-215ENST00000588913 ILDR1Q86SU0 546 aaPredicted RBP25.59■■□□□ 1.69
DNMT1-215ENST00000588913 NRXN1Q9ULB1 1477 aa25.58■■□□□ 1.69
DNMT1-215ENST00000588913 ASXL1Q8IXJ9 1541 aa25.58■■□□□ 1.69
DNMT1-215ENST00000588913 PIK3C2GO75747 1445 aa25.57■■□□□ 1.68
DNMT1-215ENST00000588913 MYOM2P54296 1465 aa25.56■■□□□ 1.68
DNMT1-215ENST00000588913 NKTRP30414 1462 aaKnown RBP25.56■■□□□ 1.68
DNMT1-215ENST00000588913 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
DNMT1-215ENST00000588913 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
DNMT1-215ENST00000588913 FBXO41Q8TF61 875 aa25.54■■□□□ 1.68
DNMT1-215ENST00000588913 AMOTL2Q9Y2J4 779 aa25.53■■□□□ 1.68
DNMT1-215ENST00000588913 PROSER2Q86WR7 435 aaPredicted RBP25.51■■□□□ 1.67
DNMT1-215ENST00000588913 DCAF11Q8TEB1 546 aa25.5■■□□□ 1.67
DNMT1-215ENST00000588913 KDM2AQ9Y2K7 1162 aa25.5■■□□□ 1.67
DNMT1-215ENST00000588913 CFAP70Q5T0N1 1121 aa25.47■■□□□ 1.67
DNMT1-215ENST00000588913 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
DNMT1-215ENST00000588913 TMEM132EQ6IEE7 984 aa25.46■■□□□ 1.67
DNMT1-215ENST00000588913 UBAP1LF5GYI3 381 aa25.45■■□□□ 1.66
DNMT1-215ENST00000588913 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
DNMT1-215ENST00000588913 C14orf93Q9H972 538 aaKnown RBP25.44■■□□□ 1.66
DNMT1-215ENST00000588913 LAMC1P11047 1609 aa25.42■■□□□ 1.66
DNMT1-215ENST00000588913 L3MBTL2Q969R5 705 aa25.41■■□□□ 1.66
DNMT1-215ENST00000588913 ADGRB1O14514 1584 aa25.41■■□□□ 1.66
DNMT1-215ENST00000588913 NALCNQ8IZF0 1738 aa25.4■■□□□ 1.66
DNMT1-215ENST00000588913 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.4■■□□□ 1.66
DNMT1-215ENST00000588913 PRAG1Q86YV5 1406 aa25.39■■□□□ 1.66
DNMT1-215ENST00000588913 KNDC1Q76NI1 1749 aa25.38■■□□□ 1.65
DNMT1-215ENST00000588913 STK26Q9P289 416 aa25.38■■□□□ 1.65
DNMT1-215ENST00000588913 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
DNMT1-215ENST00000588913 YTHDC2Q9H6S0 1430 aaKnown RBP25.37■■□□□ 1.65
DNMT1-215ENST00000588913 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
DNMT1-215ENST00000588913 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
DNMT1-215ENST00000588913 PIP4K2BP78356 416 aa25.35■■□□□ 1.65
DNMT1-215ENST00000588913 TECPR2O15040 1411 aa25.35■■□□□ 1.65
DNMT1-215ENST00000588913 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
DNMT1-215ENST00000588913 MSH6P52701 1360 aa25.32■■□□□ 1.64
DNMT1-215ENST00000588913 ABCC11Q96J66 1382 aa25.32■■□□□ 1.64
DNMT1-215ENST00000588913 TOM1O60784 492 aa25.31■■□□□ 1.64
DNMT1-215ENST00000588913 WAPLQ7Z5K2 1190 aa25.31■■□□□ 1.64
DNMT1-215ENST00000588913 KIAA1210Q9ULL0 1709 aa25.3■■□□□ 1.64
DNMT1-215ENST00000588913 ADGRL3Q9HAR2 1447 aa25.3■■□□□ 1.64
DNMT1-215ENST00000588913 C14orf37Q86TY3 774 aa25.29■■□□□ 1.64
DNMT1-215ENST00000588913 SCAF1Q9H7N4 1312 aaKnown RBP25.29■■□□□ 1.64
DNMT1-215ENST00000588913 NBPF1Q3BBV0 1214 aa25.28■■□□□ 1.64
DNMT1-215ENST00000588913 STAC3Q96MF2 364 aa25.28■■□□□ 1.64
DNMT1-215ENST00000588913 TRPM1Q7Z4N2 1603 aa25.27■■□□□ 1.64
DNMT1-215ENST00000588913 NBPF8Q3BBV2 869 aa25.26■■□□□ 1.63
DNMT1-215ENST00000588913 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
DNMT1-215ENST00000588913 ROBO1Q9Y6N7 1651 aa25.26■■□□□ 1.63
DNMT1-215ENST00000588913 ARHGEF28Q8N1W1 1705 aaKnown RBP25.24■■□□□ 1.63
DNMT1-215ENST00000588913 DLC1Q96QB1 1528 aa25.23■■□□□ 1.63
DNMT1-215ENST00000588913 TRAK1Q9UPV9 953 aa25.23■■□□□ 1.63
DNMT1-215ENST00000588913 MST1RQ04912 1400 aa25.22■■□□□ 1.63
DNMT1-215ENST00000588913 FAM135BQ49AJ0 1406 aa25.21■■□□□ 1.63
DNMT1-215ENST00000588913 SLAIN2Q9P270 581 aa25.21■■□□□ 1.63
DNMT1-215ENST00000588913 DCCP43146 1447 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms