RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 RIMS2Q9UQ26 1411 aa16.14■□□□□ 0.17
CDK3-204ENST00000588812 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
CDK3-204ENST00000588812 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
CDK3-204ENST00000588812 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
CDK3-204ENST00000588812 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
CDK3-204ENST00000588812 LTKP29376 864 aa16.13■□□□□ 0.17
CDK3-204ENST00000588812 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
CDK3-204ENST00000588812 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
CDK3-204ENST00000588812 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
CDK3-204ENST00000588812 PPP1R15AO75807 674 aaPredicted RBP16.12■□□□□ 0.17
CDK3-204ENST00000588812 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
CDK3-204ENST00000588812 VGFO15240 615 aaPredicted RBP16.11■□□□□ 0.17
CDK3-204ENST00000588812 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
CDK3-204ENST00000588812 MED14O60244 1454 aa16.1■□□□□ 0.17
CDK3-204ENST00000588812 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
CDK3-204ENST00000588812 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
CDK3-204ENST00000588812 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.17
CDK3-204ENST00000588812 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
CDK3-204ENST00000588812 NPHP4O75161 1426 aaPredicted RBP16.08■□□□□ 0.16
CDK3-204ENST00000588812 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
CDK3-204ENST00000588812 BCANQ96GW7 911 aa16.06■□□□□ 0.16
CDK3-204ENST00000588812 PPLO60437 1756 aa16.05■□□□□ 0.16
CDK3-204ENST00000588812 DCAF11Q8TEB1 546 aa16.05■□□□□ 0.16
CDK3-204ENST00000588812 TONSLQ96HA7 1378 aa16.03■□□□□ 0.16
CDK3-204ENST00000588812 IFT172Q9UG01 1749 aa16.03■□□□□ 0.16
CDK3-204ENST00000588812 IQGAP1P46940 1657 aa16.03■□□□□ 0.16
CDK3-204ENST00000588812 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
CDK3-204ENST00000588812 MYOM2P54296 1465 aa16.03■□□□□ 0.16
CDK3-204ENST00000588812 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
CDK3-204ENST00000588812 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
CDK3-204ENST00000588812 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
CDK3-204ENST00000588812 TIMELESSQ9UNS1 1208 aa16.01■□□□□ 0.15
CDK3-204ENST00000588812 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
CDK3-204ENST00000588812 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
CDK3-204ENST00000588812 TBX22Q9Y458 520 aa16■□□□□ 0.15
CDK3-204ENST00000588812 SETBP1Q9Y6X0 1596 aa16■□□□□ 0.15
CDK3-204ENST00000588812 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
CDK3-204ENST00000588812 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
CDK3-204ENST00000588812 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
CDK3-204ENST00000588812 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
CDK3-204ENST00000588812 ADAMTS13Q76LX8 1427 aa15.98■□□□□ 0.15
CDK3-204ENST00000588812 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
CDK3-204ENST00000588812 NRXN3Q9Y4C0 1643 aa15.95■□□□□ 0.14
CDK3-204ENST00000588812 C14orf93Q9H972 538 aaKnown RBP15.95■□□□□ 0.14
CDK3-204ENST00000588812 PIK3R4Q99570 1358 aa15.95■□□□□ 0.14
CDK3-204ENST00000588812 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
CDK3-204ENST00000588812 PRAG1Q86YV5 1406 aa15.94■□□□□ 0.14
CDK3-204ENST00000588812 CFAP70Q5T0N1 1121 aa15.92■□□□□ 0.14
CDK3-204ENST00000588812 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
CDK3-204ENST00000588812 METP08581 1390 aa15.91■□□□□ 0.14
CDK3-204ENST00000588812 LAMC1P11047 1609 aa15.91■□□□□ 0.14
CDK3-204ENST00000588812 KCNA6P17658 529 aa15.91■□□□□ 0.14
CDK3-204ENST00000588812 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
CDK3-204ENST00000588812 AMOTL2Q9Y2J4 779 aa15.88■□□□□ 0.13
CDK3-204ENST00000588812 NBPF8Q3BBV2 869 aa15.87■□□□□ 0.13
CDK3-204ENST00000588812 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
CDK3-204ENST00000588812 KIAA1210Q9ULL0 1709 aa15.87■□□□□ 0.13
CDK3-204ENST00000588812 CHD2O14647 1828 aaKnown RBP15.87■□□□□ 0.13
CDK3-204ENST00000588812 PTPRUQ92729 1446 aa15.86■□□□□ 0.13
CDK3-204ENST00000588812 IQSEC2Q5JU85 1478 aa15.86■□□□□ 0.13
CDK3-204ENST00000588812 CPS1P31327 1500 aa15.86■□□□□ 0.13
CDK3-204ENST00000588812 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
CDK3-204ENST00000588812 LRPPRCP42704 1394 aaKnown RBP15.86■□□□□ 0.13
CDK3-204ENST00000588812 NKTRP30414 1462 aaKnown RBP15.85■□□□□ 0.13
CDK3-204ENST00000588812 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
CDK3-204ENST00000588812 ADGRB1O14514 1584 aa15.84■□□□□ 0.13
CDK3-204ENST00000588812 NBPF1Q3BBV0 1214 aa15.84■□□□□ 0.13
CDK3-204ENST00000588812 STK26Q9P289 416 aa15.84■□□□□ 0.13
CDK3-204ENST00000588812 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
CDK3-204ENST00000588812 ASXL1Q8IXJ9 1541 aa15.84■□□□□ 0.13
CDK3-204ENST00000588812 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
CDK3-204ENST00000588812 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.12
CDK3-204ENST00000588812 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.12
CDK3-204ENST00000588812 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
CDK3-204ENST00000588812 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
CDK3-204ENST00000588812 TECPR2O15040 1411 aa15.82■□□□□ 0.12
CDK3-204ENST00000588812 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
CDK3-204ENST00000588812 RALGAPBQ86X10 1494 aa15.81■□□□□ 0.12
CDK3-204ENST00000588812 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
CDK3-204ENST00000588812 GPRASP1Q5JY77 1395 aa15.8■□□□□ 0.12
CDK3-204ENST00000588812 LRRC7Q96NW7 1537 aa15.79■□□□□ 0.12
CDK3-204ENST00000588812 ROBO2Q9HCK4 1378 aa15.79■□□□□ 0.12
CDK3-204ENST00000588812 TRAK1Q9UPV9 953 aa15.79■□□□□ 0.12
CDK3-204ENST00000588812 FAM135BQ49AJ0 1406 aa15.78■□□□□ 0.12
CDK3-204ENST00000588812 NCOA3Q9Y6Q9 1424 aa15.78■□□□□ 0.12
CDK3-204ENST00000588812 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
CDK3-204ENST00000588812 KNDC1Q76NI1 1749 aa15.78■□□□□ 0.12
CDK3-204ENST00000588812 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
CDK3-204ENST00000588812 DLC1Q96QB1 1528 aa15.78■□□□□ 0.12
CDK3-204ENST00000588812 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
CDK3-204ENST00000588812 POGKQ9P215 609 aa15.76■□□□□ 0.11
CDK3-204ENST00000588812 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
CDK3-204ENST00000588812 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
CDK3-204ENST00000588812 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
CDK3-204ENST00000588812 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
CDK3-204ENST00000588812 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
CDK3-204ENST00000588812 C19orf44Q9H6X5 657 aa15.73■□□□□ 0.11
CDK3-204ENST00000588812 MSH6P52701 1360 aa15.73■□□□□ 0.11
CDK3-204ENST00000588812 PLEKHH1Q9ULM0 1364 aa15.72■□□□□ 0.11
CDK3-204ENST00000588812 ADGRL3Q9HAR2 1447 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms