RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
TPM4-209ENST00000588483 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
TPM4-209ENST00000588483 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
TPM4-209ENST00000588483 SETD5Q9C0A6 1442 aa15.74■□□□□ 0.11
TPM4-209ENST00000588483 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
TPM4-209ENST00000588483 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
TPM4-209ENST00000588483 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
TPM4-209ENST00000588483 KIF1BO60333 1816 aa15.72■□□□□ 0.11
TPM4-209ENST00000588483 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.1
TPM4-209ENST00000588483 ADAMTS13Q76LX8 1427 aa15.7■□□□□ 0.1
TPM4-209ENST00000588483 ALKQ9UM73 1620 aa15.7■□□□□ 0.1
TPM4-209ENST00000588483 XIRP1Q702N8 1843 aaKnown RBP15.7■□□□□ 0.1
TPM4-209ENST00000588483 SETBP1Q9Y6X0 1596 aa15.7■□□□□ 0.1
TPM4-209ENST00000588483 NEXMIFQ5QGS0 1516 aa15.69■□□□□ 0.1
TPM4-209ENST00000588483 CHD2O14647 1828 aaKnown RBP15.69■□□□□ 0.1
TPM4-209ENST00000588483 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
TPM4-209ENST00000588483 KCNA6P17658 529 aa15.69■□□□□ 0.1
TPM4-209ENST00000588483 NRXN3Q9Y4C0 1643 aa15.68■□□□□ 0.1
TPM4-209ENST00000588483 PIK3R4Q99570 1358 aa15.68■□□□□ 0.1
TPM4-209ENST00000588483 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
TPM4-209ENST00000588483 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
TPM4-209ENST00000588483 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
TPM4-209ENST00000588483 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
TPM4-209ENST00000588483 UBAP1LF5GYI3 381 aa15.67■□□□□ 0.1
TPM4-209ENST00000588483 MPHOSPH9Q99550 1183 aa15.67■□□□□ 0.1
TPM4-209ENST00000588483 TOM1O60784 492 aa15.65■□□□□ 0.1
TPM4-209ENST00000588483 HRCP23327 699 aa15.65■□□□□ 0.1
TPM4-209ENST00000588483 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
TPM4-209ENST00000588483 CCDC144AA2RUR9 1427 aa15.63■□□□□ 0.09
TPM4-209ENST00000588483 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
TPM4-209ENST00000588483 PPLO60437 1756 aa15.62■□□□□ 0.09
TPM4-209ENST00000588483 SPATA31E1Q6ZUB1 1445 aa15.62■□□□□ 0.09
TPM4-209ENST00000588483 NCOA3Q9Y6Q9 1424 aa15.62■□□□□ 0.09
TPM4-209ENST00000588483 FOXD1Q16676 465 aa15.61■□□□□ 0.09
TPM4-209ENST00000588483 ZNF326Q5BKZ1 582 aaKnown RBP15.61■□□□□ 0.09
TPM4-209ENST00000588483 NUTM2DQ5VT03 806 aaPredicted RBP15.61■□□□□ 0.09
TPM4-209ENST00000588483 BCANQ96GW7 911 aa15.61■□□□□ 0.09
TPM4-209ENST00000588483 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
TPM4-209ENST00000588483 SETD1AO15047 1707 aaKnown RBP15.6■□□□□ 0.09
TPM4-209ENST00000588483 IFT172Q9UG01 1749 aa15.59■□□□□ 0.09
TPM4-209ENST00000588483 PTPRUQ92729 1446 aa15.59■□□□□ 0.09
TPM4-209ENST00000588483 VGFO15240 615 aaPredicted RBP15.57■□□□□ 0.08
TPM4-209ENST00000588483 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
TPM4-209ENST00000588483 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
TPM4-209ENST00000588483 METP08581 1390 aa15.55■□□□□ 0.08
TPM4-209ENST00000588483 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
TPM4-209ENST00000588483 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
TPM4-209ENST00000588483 MSH6P52701 1360 aa15.53■□□□□ 0.08
TPM4-209ENST00000588483 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
TPM4-209ENST00000588483 SENP3Q9H4L4 574 aaPredicted RBP15.53■□□□□ 0.08
TPM4-209ENST00000588483 AMOTL2Q9Y2J4 779 aa15.53■□□□□ 0.08
TPM4-209ENST00000588483 DCCP43146 1447 aa15.51■□□□□ 0.07
TPM4-209ENST00000588483 PTCH1Q13635 1447 aa15.51■□□□□ 0.07
TPM4-209ENST00000588483 NRXN1Q9ULB1 1477 aa15.51■□□□□ 0.07
TPM4-209ENST00000588483 HSPA1LP34931 641 aa15.5■□□□□ 0.07
TPM4-209ENST00000588483 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.5■□□□□ 0.07
TPM4-209ENST00000588483 MYOM2P54296 1465 aa15.5■□□□□ 0.07
TPM4-209ENST00000588483 PIK3C2GO75747 1445 aa15.5■□□□□ 0.07
TPM4-209ENST00000588483 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
TPM4-209ENST00000588483 RBM33Q96EV2 1170 aaKnown RBP15.49■□□□□ 0.07
TPM4-209ENST00000588483 ROBO1Q9Y6N7 1651 aa15.48■□□□□ 0.07
TPM4-209ENST00000588483 C19orf44Q9H6X5 657 aa15.48■□□□□ 0.07
TPM4-209ENST00000588483 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
TPM4-209ENST00000588483 TECPR2O15040 1411 aa15.46■□□□□ 0.07
TPM4-209ENST00000588483 ADGRL3Q9HAR2 1447 aa15.46■□□□□ 0.07
TPM4-209ENST00000588483 RGL3Q3MIN7 710 aa15.46■□□□□ 0.07
TPM4-209ENST00000588483 ASXL1Q8IXJ9 1541 aa15.45■□□□□ 0.06
TPM4-209ENST00000588483 CADPS2Q86UW7 1296 aa15.45■□□□□ 0.06
TPM4-209ENST00000588483 SLAIN2Q9P270 581 aa15.45■□□□□ 0.06
TPM4-209ENST00000588483 LAMC1P11047 1609 aa15.45■□□□□ 0.06
TPM4-209ENST00000588483 KNDC1Q76NI1 1749 aa15.44■□□□□ 0.06
TPM4-209ENST00000588483 NALCNQ8IZF0 1738 aa15.44■□□□□ 0.06
TPM4-209ENST00000588483 ROBO2Q9HCK4 1378 aa15.43■□□□□ 0.06
TPM4-209ENST00000588483 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
TPM4-209ENST00000588483 LRPPRCP42704 1394 aaKnown RBP15.41■□□□□ 0.06
TPM4-209ENST00000588483 ABCC11Q96J66 1382 aa15.41■□□□□ 0.06
TPM4-209ENST00000588483 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
TPM4-209ENST00000588483 MST1RQ04912 1400 aa15.41■□□□□ 0.06
TPM4-209ENST00000588483 AHDC1Q5TGY3 1603 aaPredicted RBP15.4■□□□□ 0.06
TPM4-209ENST00000588483 ATF3P18847 181 aa15.4■□□□□ 0.06
TPM4-209ENST00000588483 C14orf93Q9H972 538 aaKnown RBP15.39■□□□□ 0.05
TPM4-209ENST00000588483 MED1Q15648 1581 aaPredicted RBP15.39■□□□□ 0.05
TPM4-209ENST00000588483 COL16A1Q07092 1604 aaPredicted RBP15.38■□□□□ 0.05
TPM4-209ENST00000588483 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
TPM4-209ENST00000588483 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
TPM4-209ENST00000588483 CDC42BPGQ6DT37 1551 aa15.37■□□□□ 0.05
TPM4-209ENST00000588483 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
TPM4-209ENST00000588483 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
TPM4-209ENST00000588483 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
TPM4-209ENST00000588483 SIRT1Q96EB6 747 aa15.36■□□□□ 0.05
TPM4-209ENST00000588483 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
TPM4-209ENST00000588483 BRINP3Q76B58 766 aa15.35■□□□□ 0.05
TPM4-209ENST00000588483 NHSL1Q5SYE7 1610 aa15.35■□□□□ 0.05
TPM4-209ENST00000588483 C1orf167Q5SNV9 1468 aa15.33■□□□□ 0.05
TPM4-209ENST00000588483 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
TPM4-209ENST00000588483 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
TPM4-209ENST00000588483 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
TPM4-209ENST00000588483 JCADQ9P266 1359 aa15.31■□□□□ 0.04
TPM4-209ENST00000588483 KIAA1210Q9ULL0 1709 aa15.31■□□□□ 0.04
TPM4-209ENST00000588483 TRIM26Q12899 539 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms