RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 PCGF6Q9BYE7 350 aa34.39■■■■□ 3.1
CIRBP-216ENST00000588090 RIMS2Q9UQ26 1411 aa34.39■■■■□ 3.1
CIRBP-216ENST00000588090 NPHP4O75161 1426 aaPredicted RBP34.38■■■■□ 3.09
CIRBP-216ENST00000588090 LTKP29376 864 aa34.38■■■■□ 3.09
CIRBP-216ENST00000588090 ZNF326Q5BKZ1 582 aaKnown RBP34.34■■■■□ 3.09
CIRBP-216ENST00000588090 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.33■■■■□ 3.09
CIRBP-216ENST00000588090 PPP1R15AO75807 674 aaPredicted RBP34.29■■■■□ 3.08
CIRBP-216ENST00000588090 SPATA31E1Q6ZUB1 1445 aa34.29■■■■□ 3.08
CIRBP-216ENST00000588090 NEXMIFQ5QGS0 1516 aa34.28■■■■□ 3.08
CIRBP-216ENST00000588090 DHX57Q6P158 1386 aaKnown RBP34.27■■■■□ 3.08
CIRBP-216ENST00000588090 PLEKHG1Q9ULL1 1385 aa34.25■■■■□ 3.07
CIRBP-216ENST00000588090 RPGRIP1LQ68CZ1 1315 aa34.24■■■■□ 3.07
CIRBP-216ENST00000588090 PPLO60437 1756 aa34.24■■■■□ 3.07
CIRBP-216ENST00000588090 NUTM2DQ5VT03 806 aaPredicted RBP34.2■■■■□ 3.07
CIRBP-216ENST00000588090 IFT172Q9UG01 1749 aa34.19■■■■□ 3.06
CIRBP-216ENST00000588090 RGL3Q3MIN7 710 aa34.19■■■■□ 3.06
CIRBP-216ENST00000588090 BCANQ96GW7 911 aa34.17■■■■□ 3.06
CIRBP-216ENST00000588090 VGFO15240 615 aaPredicted RBP34.15■■■■□ 3.06
CIRBP-216ENST00000588090 DIP2AQ14689 1571 aa34.13■■■■□ 3.05
CIRBP-216ENST00000588090 SETBP1Q9Y6X0 1596 aa34.13■■■■□ 3.05
CIRBP-216ENST00000588090 ZNF335Q9H4Z2 1342 aaPredicted RBP34.1■■■■□ 3.05
CIRBP-216ENST00000588090 NRXN3Q9Y4C0 1643 aa34.09■■■■□ 3.05
CIRBP-216ENST00000588090 SLC26A8Q96RN1 970 aa34.09■■■■□ 3.05
CIRBP-216ENST00000588090 ADAMTS13Q76LX8 1427 aa34.08■■■■□ 3.05
CIRBP-216ENST00000588090 LTBP4Q8N2S1 1624 aa34.08■■■■□ 3.05
CIRBP-216ENST00000588090 SENP3Q9H4L4 574 aaPredicted RBP34.07■■■■□ 3.04
CIRBP-216ENST00000588090 TBX22Q9Y458 520 aa34.06■■■■□ 3.04
CIRBP-216ENST00000588090 MYOM2P54296 1465 aa34.03■■■■□ 3.04
CIRBP-216ENST00000588090 CPS1P31327 1500 aa34.02■■■■□ 3.04
CIRBP-216ENST00000588090 STRCP1A6NGW2 1772 aa34.01■■■■□ 3.04
CIRBP-216ENST00000588090 CHD2O14647 1828 aaKnown RBP33.99■■■■□ 3.03
CIRBP-216ENST00000588090 PIK3R4Q99570 1358 aa33.99■■■■□ 3.03
CIRBP-216ENST00000588090 ADGRF5Q8IZF2 1346 aa33.99■■■■□ 3.03
CIRBP-216ENST00000588090 NWD1Q149M9 1564 aa33.97■■■■□ 3.03
CIRBP-216ENST00000588090 STAC3Q96MF2 364 aa33.97■■■■□ 3.03
CIRBP-216ENST00000588090 SIN3AQ96ST3 1273 aa33.97■■■■□ 3.03
CIRBP-216ENST00000588090 SETD1AO15047 1707 aaKnown RBP33.96■■■■□ 3.03
CIRBP-216ENST00000588090 PIK3C2GO75747 1445 aa33.96■■■■□ 3.03
CIRBP-216ENST00000588090 NRXN1Q9ULB1 1477 aa33.96■■■■□ 3.03
CIRBP-216ENST00000588090 ALKQ9UM73 1620 aa33.95■■■■□ 3.03
CIRBP-216ENST00000588090 KCNA6P17658 529 aa33.94■■■■□ 3.02
CIRBP-216ENST00000588090 DCAF11Q8TEB1 546 aa33.94■■■■□ 3.02
CIRBP-216ENST00000588090 CERKQ8TCT0 537 aa33.92■■■■□ 3.02
CIRBP-216ENST00000588090 NEUROD1Q13562 356 aa33.91■■■■□ 3.02
CIRBP-216ENST00000588090 NKTRP30414 1462 aaKnown RBP33.91■■■■□ 3.02
CIRBP-216ENST00000588090 LAMC1P11047 1609 aa33.9■■■■□ 3.02
CIRBP-216ENST00000588090 IQSEC2Q5JU85 1478 aa33.89■■■■□ 3.02
CIRBP-216ENST00000588090 METP08581 1390 aa33.88■■■■□ 3.01
CIRBP-216ENST00000588090 KDM2AQ9Y2K7 1162 aa33.88■■■■□ 3.01
CIRBP-216ENST00000588090 CLSPNQ9HAW4 1339 aa33.86■■■■□ 3.01
CIRBP-216ENST00000588090 LRRC7Q96NW7 1537 aa33.85■■■■□ 3.01
CIRBP-216ENST00000588090 XRN1Q8IZH2 1706 aaKnown RBP33.85■■■■□ 3.01
CIRBP-216ENST00000588090 PTPRUQ92729 1446 aa33.83■■■■□ 3.01
CIRBP-216ENST00000588090 C14orf93Q9H972 538 aaKnown RBP33.81■■■■□ 3
CIRBP-216ENST00000588090 AMOTL2Q9Y2J4 779 aa33.81■■■■□ 3
CIRBP-216ENST00000588090 L3MBTL2Q969R5 705 aa33.8■■■■□ 3
CIRBP-216ENST00000588090 XIRP1Q702N8 1843 aaKnown RBP33.78■■■■□ 3
CIRBP-216ENST00000588090 PROSER2Q86WR7 435 aaPredicted RBP33.76■■■■□ 3
CIRBP-216ENST00000588090 TONSLQ96HA7 1378 aa33.76■■■■□ 3
CIRBP-216ENST00000588090 ASXL1Q8IXJ9 1541 aa33.76■■■□□ 2.99
CIRBP-216ENST00000588090 CCER1Q8TC90 406 aaPredicted RBP33.76■■■□□ 2.99
CIRBP-216ENST00000588090 CFAP70Q5T0N1 1121 aa33.75■■■□□ 2.99
CIRBP-216ENST00000588090 PRAG1Q86YV5 1406 aa33.74■■■□□ 2.99
CIRBP-216ENST00000588090 TMEM94Q12767 1356 aa33.74■■■□□ 2.99
CIRBP-216ENST00000588090 KIAA1210Q9ULL0 1709 aa33.73■■■□□ 2.99
CIRBP-216ENST00000588090 PTCH1Q13635 1447 aa33.71■■■□□ 2.99
CIRBP-216ENST00000588090 KNDC1Q76NI1 1749 aa33.7■■■□□ 2.99
CIRBP-216ENST00000588090 NCOA3Q9Y6Q9 1424 aa33.69■■■□□ 2.98
CIRBP-216ENST00000588090 TMEM132EQ6IEE7 984 aa33.69■■■□□ 2.98
CIRBP-216ENST00000588090 LRPPRCP42704 1394 aaKnown RBP33.68■■■□□ 2.98
CIRBP-216ENST00000588090 YTHDC2Q9H6S0 1430 aaKnown RBP33.67■■■□□ 2.98
CIRBP-216ENST00000588090 ADGRB1O14514 1584 aa33.67■■■□□ 2.98
CIRBP-216ENST00000588090 TECPR2O15040 1411 aa33.66■■■□□ 2.98
CIRBP-216ENST00000588090 ABCC11Q96J66 1382 aa33.64■■■□□ 2.98
CIRBP-216ENST00000588090 RBM33Q96EV2 1170 aaKnown RBP33.63■■■□□ 2.97
CIRBP-216ENST00000588090 ROBO2Q9HCK4 1378 aa33.62■■■□□ 2.97
CIRBP-216ENST00000588090 STK26Q9P289 416 aa33.61■■■□□ 2.97
CIRBP-216ENST00000588090 MSH6P52701 1360 aa33.6■■■□□ 2.97
CIRBP-216ENST00000588090 TRPM1Q7Z4N2 1603 aa33.59■■■□□ 2.97
CIRBP-216ENST00000588090 C14orf37Q86TY3 774 aa33.58■■■□□ 2.97
CIRBP-216ENST00000588090 FBXO41Q8TF61 875 aa33.58■■■□□ 2.97
CIRBP-216ENST00000588090 TIMELESSQ9UNS1 1208 aa33.57■■■□□ 2.97
CIRBP-216ENST00000588090 UBAP1LF5GYI3 381 aa33.56■■■□□ 2.96
CIRBP-216ENST00000588090 DLC1Q96QB1 1528 aa33.56■■■□□ 2.96
CIRBP-216ENST00000588090 TOM1O60784 492 aa33.55■■■□□ 2.96
CIRBP-216ENST00000588090 FAM135BQ49AJ0 1406 aa33.54■■■□□ 2.96
CIRBP-216ENST00000588090 NALCNQ8IZF0 1738 aa33.54■■■□□ 2.96
CIRBP-216ENST00000588090 SIRT1Q96EB6 747 aa33.54■■■□□ 2.96
CIRBP-216ENST00000588090 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.54■■■□□ 2.96
CIRBP-216ENST00000588090 C19orf44Q9H6X5 657 aa33.53■■■□□ 2.96
CIRBP-216ENST00000588090 ADGRL3Q9HAR2 1447 aa33.53■■■□□ 2.96
CIRBP-216ENST00000588090 DCCP43146 1447 aa33.5■■■□□ 2.95
CIRBP-216ENST00000588090 NBPF1Q3BBV0 1214 aa33.5■■■□□ 2.95
CIRBP-216ENST00000588090 NBPF8Q3BBV2 869 aa33.48■■■□□ 2.95
CIRBP-216ENST00000588090 ARHGEF28Q8N1W1 1705 aaKnown RBP33.47■■■□□ 2.95
CIRBP-216ENST00000588090 TRAK1Q9UPV9 953 aa33.47■■■□□ 2.95
CIRBP-216ENST00000588090 WAPLQ7Z5K2 1190 aa33.46■■■□□ 2.95
CIRBP-216ENST00000588090 ROCK2O75116 1388 aaKnown RBP33.46■■■□□ 2.95
CIRBP-216ENST00000588090 ATF3P18847 181 aa33.44■■■□□ 2.94
CIRBP-216ENST00000588090 CADPS2Q86UW7 1296 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms