RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PAK3O75914 559 aaPredicted RBP24.49■■□□□ 1.51
DDX39A-206ENST00000587730 SPHKAPQ2M3C7 1700 aa24.48■■□□□ 1.51
DDX39A-206ENST00000587730 RTL5Q5HYW3 569 aaPredicted RBP24.47■■□□□ 1.51
DDX39A-206ENST00000587730 PIK3C2GO75747 1445 aa24.47■■□□□ 1.51
DDX39A-206ENST00000587730 PDE4AP27815 886 aa24.47■■□□□ 1.51
DDX39A-206ENST00000587730 DEKP35659 375 aaKnown RBP24.47■■□□□ 1.51
DDX39A-206ENST00000587730 BACH2Q9BYV9 841 aa24.47■■□□□ 1.51
DDX39A-206ENST00000587730 WDR43Q15061 677 aaKnown RBP eCLIP24.46■■□□□ 1.51
DDX39A-206ENST00000587730 CEP152O94986 1710 aa24.46■■□□□ 1.51
DDX39A-206ENST00000587730 KIAA1210Q9ULL0 1709 aa24.46■■□□□ 1.51
DDX39A-206ENST00000587730 DEPDC5O75140 1603 aa24.45■■□□□ 1.5
DDX39A-206ENST00000587730 CDCA7LQ96GN5 454 aa24.45■■□□□ 1.5
DDX39A-206ENST00000587730 ASXL1Q8IXJ9 1541 aa24.44■■□□□ 1.5
DDX39A-206ENST00000587730 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-206ENST00000587730 SALL2Q9Y467 1007 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-206ENST00000587730 SPAG9O60271 1321 aaKnown RBP24.44■■□□□ 1.5
DDX39A-206ENST00000587730 NGEFQ8N5V2 710 aa24.43■■□□□ 1.5
DDX39A-206ENST00000587730 KANK1Q14678 1352 aa24.43■■□□□ 1.5
DDX39A-206ENST00000587730 TET3O43151 1660 aa24.43■■□□□ 1.5
DDX39A-206ENST00000587730 SENP3-EIF4A1A0A087X0R7 540 aa24.42■■□□□ 1.5
DDX39A-206ENST00000587730 PPP2R1AP30153 589 aa24.42■■□□□ 1.5
DDX39A-206ENST00000587730 ZFYVE16Q7Z3T8 1539 aa24.42■■□□□ 1.5
DDX39A-206ENST00000587730 TRAPPC8Q9Y2L5 1435 aa24.41■■□□□ 1.5
DDX39A-206ENST00000587730 AMER1Q5JTC6 1135 aaPredicted RBP24.4■■□□□ 1.5
DDX39A-206ENST00000587730 DDRGK1Q96HY6 314 aa24.4■■□□□ 1.5
DDX39A-206ENST00000587730 USP35Q9P2H5 1018 aa24.4■■□□□ 1.5
DDX39A-206ENST00000587730 ADAMTS8Q9UP79 889 aa24.39■■□□□ 1.49
DDX39A-206ENST00000587730 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
DDX39A-206ENST00000587730 ZNF521Q96K83 1311 aa24.37■■□□□ 1.49
DDX39A-206ENST00000587730 CENPQQ7L2Z9 268 aaPredicted RBP24.36■■□□□ 1.49
DDX39A-206ENST00000587730 CRBNQ96SW2 442 aa24.36■■□□□ 1.49
DDX39A-206ENST00000587730 MYOM2P54296 1465 aa24.36■■□□□ 1.49
DDX39A-206ENST00000587730 GOLGA2Q08379 1002 aa24.35■■□□□ 1.49
DDX39A-206ENST00000587730 NBR1Q14596 966 aa24.35■■□□□ 1.49
DDX39A-206ENST00000587730 CLTCL1P53675 1640 aa24.34■■□□□ 1.49
DDX39A-206ENST00000587730 ABCA9Q8IUA7 1624 aa24.34■■□□□ 1.49
DDX39A-206ENST00000587730 PPM1GO15355 546 aaPredicted RBP24.33■■□□□ 1.49
DDX39A-206ENST00000587730 DIP2BQ9P265 1576 aa24.33■■□□□ 1.49
DDX39A-206ENST00000587730 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.48
DDX39A-206ENST00000587730 DUSP27Q5VZP5 1158 aa24.33■■□□□ 1.48
DDX39A-206ENST00000587730 KDM5AP29375 1690 aaKnown RBP24.32■■□□□ 1.48
DDX39A-206ENST00000587730 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
DDX39A-206ENST00000587730 KDM2BQ8NHM5 1336 aa24.3■■□□□ 1.48
DDX39A-206ENST00000587730 ATP7AQ04656 1500 aa24.29■■□□□ 1.48
DDX39A-206ENST00000587730 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
DDX39A-206ENST00000587730 PLIN1O60240 522 aa24.28■■□□□ 1.48
DDX39A-206ENST00000587730 KIF13AQ9H1H9 1805 aa24.28■■□□□ 1.48
DDX39A-206ENST00000587730 MYOM1P52179 1685 aa24.28■■□□□ 1.48
DDX39A-206ENST00000587730 SBNO2Q9Y2G9 1366 aa24.27■■□□□ 1.48
DDX39A-206ENST00000587730 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
DDX39A-206ENST00000587730 SLFN5Q08AF3 891 aa24.26■■□□□ 1.47
DDX39A-206ENST00000587730 TRMT2AQ8IZ69 625 aaKnown RBP24.26■■□□□ 1.47
DDX39A-206ENST00000587730 MAP3K4Q9Y6R4 1608 aa24.25■■□□□ 1.47
DDX39A-206ENST00000587730 NINLQ9Y2I6 1382 aa24.25■■□□□ 1.47
DDX39A-206ENST00000587730 GLI2P10070 1586 aa24.24■■□□□ 1.47
DDX39A-206ENST00000587730 NKTRP30414 1462 aaKnown RBP24.23■■□□□ 1.47
DDX39A-206ENST00000587730 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
DDX39A-206ENST00000587730 FANCAO15360 1455 aa24.22■■□□□ 1.47
DDX39A-206ENST00000587730 E9PSI1 815 aa24.21■■□□□ 1.47
DDX39A-206ENST00000587730 CD109Q6YHK3 1445 aa24.21■■□□□ 1.47
DDX39A-206ENST00000587730 AFAP1Q8N556 730 aa24.21■■□□□ 1.47
DDX39A-206ENST00000587730 MYO3AQ8NEV4 1616 aa24.2■■□□□ 1.46
DDX39A-206ENST00000587730 LMTK2Q8IWU2 1503 aa24.19■■□□□ 1.46
DDX39A-206ENST00000587730 NRXN1Q9ULB1 1477 aa24.19■■□□□ 1.46
DDX39A-206ENST00000587730 TSPOAP1O95153 1857 aa24.19■■□□□ 1.46
DDX39A-206ENST00000587730 ERVK-7P63135 1459 aa24.19■■□□□ 1.46
DDX39A-206ENST00000587730 FAM161AQ3B820 660 aa24.18■■□□□ 1.46
DDX39A-206ENST00000587730 EFCAB6Q5THR3 1501 aa24.18■■□□□ 1.46
DDX39A-206ENST00000587730 SETBP1Q9Y6X0 1596 aa24.17■■□□□ 1.46
DDX39A-206ENST00000587730 C20orf194Q5TEA3 1177 aa24.17■■□□□ 1.46
DDX39A-206ENST00000587730 ABCA6Q8N139 1617 aa24.16■■□□□ 1.46
DDX39A-206ENST00000587730 POLR3AO14802 1390 aaPredicted RBP24.16■■□□□ 1.46
DDX39A-206ENST00000587730 KIF1BO60333 1816 aa24.15■■□□□ 1.46
DDX39A-206ENST00000587730 CFAP74Q9C0B2 1584 aa24.15■■□□□ 1.46
DDX39A-206ENST00000587730 AAMPQ13685 434 aa24.14■■□□□ 1.46
DDX39A-206ENST00000587730 ADGRL1O94910 1474 aa24.14■■□□□ 1.46
DDX39A-206ENST00000587730 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.46
DDX39A-206ENST00000587730 IFT172Q9UG01 1749 aa24.14■■□□□ 1.45
DDX39A-206ENST00000587730 KIF3BO15066 747 aa24.13■■□□□ 1.45
DDX39A-206ENST00000587730 DAXXQ9UER7 740 aaPredicted RBP24.13■■□□□ 1.45
DDX39A-206ENST00000587730 NEFMP07197 916 aa24.12■■□□□ 1.45
DDX39A-206ENST00000587730 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
DDX39A-206ENST00000587730 PPRC1Q5VV67 1664 aaKnown RBP24.12■■□□□ 1.45
DDX39A-206ENST00000587730 PDE3AQ14432 1141 aa24.12■■□□□ 1.45
DDX39A-206ENST00000587730 APAF1O14727 1248 aa24.09■■□□□ 1.45
DDX39A-206ENST00000587730 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.45
DDX39A-206ENST00000587730 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
DDX39A-206ENST00000587730 ADGRB3O60242 1522 aa24.07■■□□□ 1.44
DDX39A-206ENST00000587730 PUS7Q96PZ0 661 aaKnown RBP24.05■■□□□ 1.44
DDX39A-206ENST00000587730 CENPJQ9HC77 1338 aaPredicted RBP24.05■■□□□ 1.44
DDX39A-206ENST00000587730 ZNF518AQ6AHZ1 1483 aa24.05■■□□□ 1.44
DDX39A-206ENST00000587730 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
DDX39A-206ENST00000587730 USP32Q8NFA0 1604 aa24.04■■□□□ 1.44
DDX39A-206ENST00000587730 RPGRIP1LQ68CZ1 1315 aa24.04■■□□□ 1.44
DDX39A-206ENST00000587730 C8orf34Q49A92 452 aa24.04■■□□□ 1.44
DDX39A-206ENST00000587730 MAPK8IP3Q9UPT6 1336 aa24.03■■□□□ 1.44
DDX39A-206ENST00000587730 CCDC146Q8IYE0 955 aa24.03■■□□□ 1.44
DDX39A-206ENST00000587730 LAS1LQ9Y4W2 734 aaKnown RBP24.03■■□□□ 1.44
DDX39A-206ENST00000587730 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
DDX39A-206ENST00000587730 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms