RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 STRCP1A6NGW2 1772 aa35.93■■■■□ 3.34
ERCC2-209ENST00000586856 RAB3GAP2Q9H2M9 1393 aa35.89■■■■□ 3.34
ERCC2-209ENST00000586856 KIF1BO60333 1816 aa35.89■■■■□ 3.34
ERCC2-209ENST00000586856 PLEKHG1Q9ULL1 1385 aa35.86■■■■□ 3.33
ERCC2-209ENST00000586856 PPP1R15AO75807 674 aaPredicted RBP35.85■■■■□ 3.33
ERCC2-209ENST00000586856 ACIN1Q9UKV3 1341 aaKnown RBP35.84■■■■□ 3.33
ERCC2-209ENST00000586856 HDGFP51858 240 aaKnown RBP35.83■■■■□ 3.33
ERCC2-209ENST00000586856 MPHOSPH9Q99550 1183 aa35.83■■■■□ 3.33
ERCC2-209ENST00000586856 FOXD1Q16676 465 aa35.81■■■■□ 3.32
ERCC2-209ENST00000586856 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.81■■■■□ 3.32
ERCC2-209ENST00000586856 NUTM2DQ5VT03 806 aaPredicted RBP35.78■■■■□ 3.32
ERCC2-209ENST00000586856 SLC26A8Q96RN1 970 aa35.78■■■■□ 3.32
ERCC2-209ENST00000586856 BCANQ96GW7 911 aa35.77■■■■□ 3.32
ERCC2-209ENST00000586856 SENP3Q9H4L4 574 aaPredicted RBP35.76■■■■□ 3.32
ERCC2-209ENST00000586856 NEXMIFQ5QGS0 1516 aa35.76■■■■□ 3.31
ERCC2-209ENST00000586856 LRRC7Q96NW7 1537 aa35.76■■■■□ 3.31
ERCC2-209ENST00000586856 ZNF326Q5BKZ1 582 aaKnown RBP35.74■■■■□ 3.31
ERCC2-209ENST00000586856 DIP2AQ14689 1571 aa35.73■■■■□ 3.31
ERCC2-209ENST00000586856 NWD1Q149M9 1564 aa35.73■■■■□ 3.31
ERCC2-209ENST00000586856 CCDC144AA2RUR9 1427 aa35.7■■■■□ 3.31
ERCC2-209ENST00000586856 ADAMTS13Q76LX8 1427 aa35.7■■■■□ 3.31
ERCC2-209ENST00000586856 NRXN3Q9Y4C0 1643 aa35.68■■■■□ 3.3
ERCC2-209ENST00000586856 SETBP1Q9Y6X0 1596 aa35.67■■■■□ 3.3
ERCC2-209ENST00000586856 XIRP1Q702N8 1843 aaKnown RBP35.67■■■■□ 3.3
ERCC2-209ENST00000586856 CHD2O14647 1828 aaKnown RBP35.66■■■■□ 3.3
ERCC2-209ENST00000586856 KCNA6P17658 529 aa35.65■■■■□ 3.3
ERCC2-209ENST00000586856 UBAP1LF5GYI3 381 aa35.64■■■■□ 3.3
ERCC2-209ENST00000586856 NKTRP30414 1462 aaKnown RBP35.64■■■■□ 3.3
ERCC2-209ENST00000586856 PPLO60437 1756 aa35.63■■■■□ 3.29
ERCC2-209ENST00000586856 TBX22Q9Y458 520 aa35.62■■■■□ 3.29
ERCC2-209ENST00000586856 HRCP23327 699 aa35.61■■■■□ 3.29
ERCC2-209ENST00000586856 SPATA31E1Q6ZUB1 1445 aa35.57■■■■□ 3.29
ERCC2-209ENST00000586856 ALKQ9UM73 1620 aa35.56■■■■□ 3.28
ERCC2-209ENST00000586856 PIK3R4Q99570 1358 aa35.55■■■■□ 3.28
ERCC2-209ENST00000586856 RPGRIP1LQ68CZ1 1315 aa35.55■■■■□ 3.28
ERCC2-209ENST00000586856 IFT172Q9UG01 1749 aa35.54■■■■□ 3.28
ERCC2-209ENST00000586856 TMEM94Q12767 1356 aa35.53■■■■□ 3.28
ERCC2-209ENST00000586856 TOM1O60784 492 aa35.5■■■■□ 3.27
ERCC2-209ENST00000586856 PROSER2Q86WR7 435 aaPredicted RBP35.49■■■■□ 3.27
ERCC2-209ENST00000586856 XRN1Q8IZH2 1706 aaKnown RBP35.49■■■■□ 3.27
ERCC2-209ENST00000586856 SETD1AO15047 1707 aaKnown RBP35.48■■■■□ 3.27
ERCC2-209ENST00000586856 VGFO15240 615 aaPredicted RBP35.47■■■■□ 3.27
ERCC2-209ENST00000586856 PTPRUQ92729 1446 aa35.47■■■■□ 3.27
ERCC2-209ENST00000586856 ANKRD30BQ9BXX2 1392 aa35.46■■■■□ 3.27
ERCC2-209ENST00000586856 RGL3Q3MIN7 710 aa35.44■■■■□ 3.26
ERCC2-209ENST00000586856 METP08581 1390 aa35.43■■■■□ 3.26
ERCC2-209ENST00000586856 RBM33Q96EV2 1170 aaKnown RBP35.43■■■■□ 3.26
ERCC2-209ENST00000586856 SCAF1Q9H7N4 1312 aaKnown RBP35.42■■■■□ 3.26
ERCC2-209ENST00000586856 PIP4K2BP78356 416 aa35.41■■■■□ 3.26
ERCC2-209ENST00000586856 AMOTL2Q9Y2J4 779 aa35.38■■■■□ 3.25
ERCC2-209ENST00000586856 ADGRF5Q8IZF2 1346 aa35.34■■■■□ 3.25
ERCC2-209ENST00000586856 MSH6P52701 1360 aa35.34■■■■□ 3.25
ERCC2-209ENST00000586856 NCOA3Q9Y6Q9 1424 aa35.33■■■■□ 3.25
ERCC2-209ENST00000586856 MYOM2P54296 1465 aa35.3■■■■□ 3.24
ERCC2-209ENST00000586856 PIK3C2GO75747 1445 aa35.3■■■■□ 3.24
ERCC2-209ENST00000586856 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.26■■■■□ 3.24
ERCC2-209ENST00000586856 NRXN1Q9ULB1 1477 aa35.26■■■■□ 3.23
ERCC2-209ENST00000586856 C14orf37Q86TY3 774 aa35.25■■■■□ 3.23
ERCC2-209ENST00000586856 PTCH1Q13635 1447 aa35.23■■■■□ 3.23
ERCC2-209ENST00000586856 PRAG1Q86YV5 1406 aa35.23■■■■□ 3.23
ERCC2-209ENST00000586856 ASXL1Q8IXJ9 1541 aa35.22■■■■□ 3.23
ERCC2-209ENST00000586856 HSPA1LP34931 641 aa35.22■■■■□ 3.23
ERCC2-209ENST00000586856 TRIM26Q12899 539 aaPredicted RBP35.21■■■■□ 3.23
ERCC2-209ENST00000586856 LAMC1P11047 1609 aa35.21■■■■□ 3.23
ERCC2-209ENST00000586856 ROBO1Q9Y6N7 1651 aa35.2■■■■□ 3.23
ERCC2-209ENST00000586856 NALCNQ8IZF0 1738 aa35.19■■■■□ 3.22
ERCC2-209ENST00000586856 FAM135BQ49AJ0 1406 aa35.17■■■■□ 3.22
ERCC2-209ENST00000586856 ROBO2Q9HCK4 1378 aa35.16■■■■□ 3.22
ERCC2-209ENST00000586856 C19orf44Q9H6X5 657 aa35.16■■■■□ 3.22
ERCC2-209ENST00000586856 KNDC1Q76NI1 1749 aa35.15■■■■□ 3.22
ERCC2-209ENST00000586856 DCCP43146 1447 aa35.15■■■■□ 3.22
ERCC2-209ENST00000586856 ADGRL3Q9HAR2 1447 aa35.15■■■■□ 3.22
ERCC2-209ENST00000586856 CADPS2Q86UW7 1296 aa35.11■■■■□ 3.21
ERCC2-209ENST00000586856 TECPR2O15040 1411 aa35.1■■■■□ 3.21
ERCC2-209ENST00000586856 SLAIN2Q9P270 581 aa35.1■■■■□ 3.21
ERCC2-209ENST00000586856 DHX57Q6P158 1386 aaKnown RBP35.1■■■■□ 3.21
ERCC2-209ENST00000586856 ATF3P18847 181 aa35.09■■■■□ 3.21
ERCC2-209ENST00000586856 LRPPRCP42704 1394 aaKnown RBP35.09■■■■□ 3.21
ERCC2-209ENST00000586856 C14orf93Q9H972 538 aaKnown RBP35.08■■■■□ 3.21
ERCC2-209ENST00000586856 DCAF11Q8TEB1 546 aa35.07■■■■□ 3.2
ERCC2-209ENST00000586856 TMEM132EQ6IEE7 984 aa35.06■■■■□ 3.2
ERCC2-209ENST00000586856 YTHDC2Q9H6S0 1430 aaKnown RBP35.06■■■■□ 3.2
ERCC2-209ENST00000586856 CFAP70Q5T0N1 1121 aa35.05■■■■□ 3.2
ERCC2-209ENST00000586856 KDM2AQ9Y2K7 1162 aa35.04■■■■□ 3.2
ERCC2-209ENST00000586856 STK26Q9P289 416 aa35.03■■■■□ 3.2
ERCC2-209ENST00000586856 ABCC11Q96J66 1382 aa35.02■■■■□ 3.2
ERCC2-209ENST00000586856 MST1RQ04912 1400 aa35.01■■■■□ 3.2
ERCC2-209ENST00000586856 ADGRB1O14514 1584 aa35■■■■□ 3.19
ERCC2-209ENST00000586856 STAC3Q96MF2 364 aa34.99■■■■□ 3.19
ERCC2-209ENST00000586856 PHLPP1O60346 1717 aa34.98■■■■□ 3.19
ERCC2-209ENST00000586856 CDC42BPGQ6DT37 1551 aa34.96■■■■□ 3.19
ERCC2-209ENST00000586856 PLEKHH1Q9ULM0 1364 aa34.93■■■■□ 3.18
ERCC2-209ENST00000586856 AHDC1Q5TGY3 1603 aaPredicted RBP34.92■■■■□ 3.18
ERCC2-209ENST00000586856 WAPLQ7Z5K2 1190 aa34.91■■■■□ 3.18
ERCC2-209ENST00000586856 COL16A1Q07092 1604 aaPredicted RBP34.91■■■■□ 3.18
ERCC2-209ENST00000586856 MED1Q15648 1581 aaPredicted RBP34.91■■■■□ 3.18
ERCC2-209ENST00000586856 DLC1Q96QB1 1528 aa34.91■■■■□ 3.18
ERCC2-209ENST00000586856 BRINP3Q76B58 766 aa34.89■■■■□ 3.18
ERCC2-209ENST00000586856 SIN3AQ96ST3 1273 aa34.88■■■■□ 3.17
ERCC2-209ENST00000586856 KIAA1210Q9ULL0 1709 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms