RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 NUTM2DQ5VT03 806 aaPredicted RBP28.59■■■□□ 2.17
TPM4-204ENST00000586499 BCANQ96GW7 911 aa28.59■■■□□ 2.17
TPM4-204ENST00000586499 PPP1R15AO75807 674 aaPredicted RBP28.56■■■□□ 2.16
TPM4-204ENST00000586499 SLC4A1APQ9BWU0 796 aaKnown RBP28.56■■■□□ 2.16
TPM4-204ENST00000586499 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
TPM4-204ENST00000586499 HDGFP51858 240 aaKnown RBP28.55■■■□□ 2.16
TPM4-204ENST00000586499 PLEKHG1Q9ULL1 1385 aa28.52■■■□□ 2.16
TPM4-204ENST00000586499 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.51■■■□□ 2.15
TPM4-204ENST00000586499 CLTCL1P53675 1640 aa28.5■■■□□ 2.15
TPM4-204ENST00000586499 FOXD1Q16676 465 aa28.49■■■□□ 2.15
TPM4-204ENST00000586499 TRPM2O94759 1503 aa28.48■■■□□ 2.15
TPM4-204ENST00000586499 KCNA6P17658 529 aa28.48■■■□□ 2.15
TPM4-204ENST00000586499 ZNF326Q5BKZ1 582 aaKnown RBP28.47■■■□□ 2.15
TPM4-204ENST00000586499 TOM1O60784 492 aa28.46■■■□□ 2.15
TPM4-204ENST00000586499 PIP4K2BP78356 416 aa28.46■■■□□ 2.15
TPM4-204ENST00000586499 SCAF1Q9H7N4 1312 aaKnown RBP28.45■■■□□ 2.15
TPM4-204ENST00000586499 SETD5Q9C0A6 1442 aa28.44■■■□□ 2.14
TPM4-204ENST00000586499 RBM33Q96EV2 1170 aaKnown RBP28.43■■■□□ 2.14
TPM4-204ENST00000586499 MPHOSPH9Q99550 1183 aa28.43■■■□□ 2.14
TPM4-204ENST00000586499 TBX22Q9Y458 520 aa28.42■■■□□ 2.14
TPM4-204ENST00000586499 ALKQ9UM73 1620 aa28.42■■■□□ 2.14
TPM4-204ENST00000586499 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
TPM4-204ENST00000586499 XIRP1Q702N8 1843 aaKnown RBP28.41■■■□□ 2.14
TPM4-204ENST00000586499 PROSER2Q86WR7 435 aaPredicted RBP28.4■■■□□ 2.14
TPM4-204ENST00000586499 TMEM94Q12767 1356 aa28.38■■■□□ 2.13
TPM4-204ENST00000586499 KIF1BO60333 1816 aa28.37■■■□□ 2.13
TPM4-204ENST00000586499 NWD1Q149M9 1564 aa28.37■■■□□ 2.13
TPM4-204ENST00000586499 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
TPM4-204ENST00000586499 CHD2O14647 1828 aaKnown RBP28.35■■■□□ 2.13
TPM4-204ENST00000586499 NEXMIFQ5QGS0 1516 aa28.33■■■□□ 2.13
TPM4-204ENST00000586499 NKTRP30414 1462 aaKnown RBP28.32■■■□□ 2.12
TPM4-204ENST00000586499 HSPA1LP34931 641 aa28.31■■■□□ 2.12
TPM4-204ENST00000586499 NRXN3Q9Y4C0 1643 aa28.3■■■□□ 2.12
TPM4-204ENST00000586499 DIP2AQ14689 1571 aa28.3■■■□□ 2.12
TPM4-204ENST00000586499 SETBP1Q9Y6X0 1596 aa28.28■■■□□ 2.12
TPM4-204ENST00000586499 PTPRUQ92729 1446 aa28.26■■■□□ 2.12
TPM4-204ENST00000586499 ACIN1Q9UKV3 1341 aaKnown RBP28.26■■■□□ 2.11
TPM4-204ENST00000586499 AMOTL2Q9Y2J4 779 aa28.26■■■□□ 2.11
TPM4-204ENST00000586499 CCDC144AA2RUR9 1427 aa28.26■■■□□ 2.11
TPM4-204ENST00000586499 PIK3R4Q99570 1358 aa28.25■■■□□ 2.11
TPM4-204ENST00000586499 METP08581 1390 aa28.24■■■□□ 2.11
TPM4-204ENST00000586499 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
TPM4-204ENST00000586499 RGL3Q3MIN7 710 aa28.23■■■□□ 2.11
TPM4-204ENST00000586499 RPGRIP1LQ68CZ1 1315 aa28.22■■■□□ 2.11
TPM4-204ENST00000586499 MSH6P52701 1360 aa28.19■■■□□ 2.1
TPM4-204ENST00000586499 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
TPM4-204ENST00000586499 PPLO60437 1756 aa28.17■■■□□ 2.1
TPM4-204ENST00000586499 C14orf37Q86TY3 774 aa28.17■■■□□ 2.1
TPM4-204ENST00000586499 XRN1Q8IZH2 1706 aaKnown RBP28.13■■■□□ 2.09
TPM4-204ENST00000586499 HRCP23327 699 aa28.13■■■□□ 2.09
TPM4-204ENST00000586499 ADGRF5Q8IZF2 1346 aa28.13■■■□□ 2.09
TPM4-204ENST00000586499 DISP3Q9P2K9 1392 aa28.12■■■□□ 2.09
TPM4-204ENST00000586499 NCOA3Q9Y6Q9 1424 aa28.12■■■□□ 2.09
TPM4-204ENST00000586499 FAM135BQ49AJ0 1406 aa28.11■■■□□ 2.09
TPM4-204ENST00000586499 SLAIN2Q9P270 581 aa28.11■■■□□ 2.09
TPM4-204ENST00000586499 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
TPM4-204ENST00000586499 SETD1AO15047 1707 aaKnown RBP28.09■■■□□ 2.09
TPM4-204ENST00000586499 ROBO1Q9Y6N7 1651 aa28.07■■■□□ 2.08
TPM4-204ENST00000586499 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.07■■■□□ 2.08
TPM4-204ENST00000586499 ANKRD30BQ9BXX2 1392 aa28.06■■■□□ 2.08
TPM4-204ENST00000586499 IFT172Q9UG01 1749 aa28.06■■■□□ 2.08
TPM4-204ENST00000586499 ATF3P18847 181 aa28.04■■■□□ 2.08
TPM4-204ENST00000586499 CADPS2Q86UW7 1296 aa28.03■■■□□ 2.08
TPM4-204ENST00000586499 ROBO2Q9HCK4 1378 aa27.99■■■□□ 2.07
TPM4-204ENST00000586499 TMEM132EQ6IEE7 984 aa27.97■■■□□ 2.07
TPM4-204ENST00000586499 PIK3C2GO75747 1445 aa27.96■■■□□ 2.07
TPM4-204ENST00000586499 MED1Q15648 1581 aaPredicted RBP27.94■■■□□ 2.06
TPM4-204ENST00000586499 PTCH1Q13635 1447 aa27.94■■■□□ 2.06
TPM4-204ENST00000586499 ADGRL3Q9HAR2 1447 aa27.94■■■□□ 2.06
TPM4-204ENST00000586499 STK26Q9P289 416 aa27.94■■■□□ 2.06
TPM4-204ENST00000586499 NALCNQ8IZF0 1738 aa27.93■■■□□ 2.06
TPM4-204ENST00000586499 ILDR2Q71H61 639 aa27.93■■■□□ 2.06
TPM4-204ENST00000586499 DCCP43146 1447 aa27.92■■■□□ 2.06
TPM4-204ENST00000586499 ASXL1Q8IXJ9 1541 aa27.91■■■□□ 2.06
TPM4-204ENST00000586499 PRAG1Q86YV5 1406 aa27.91■■■□□ 2.06
TPM4-204ENST00000586499 CFAP70Q5T0N1 1121 aa27.9■■■□□ 2.06
TPM4-204ENST00000586499 C14orf93Q9H972 538 aaKnown RBP27.9■■■□□ 2.06
TPM4-204ENST00000586499 MST1RQ04912 1400 aa27.9■■■□□ 2.06
TPM4-204ENST00000586499 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.06
TPM4-204ENST00000586499 BRINP3Q76B58 766 aa27.89■■■□□ 2.06
TPM4-204ENST00000586499 PHLPP1O60346 1717 aa27.89■■■□□ 2.05
TPM4-204ENST00000586499 MYOM2P54296 1465 aa27.89■■■□□ 2.05
TPM4-204ENST00000586499 KDM2AQ9Y2K7 1162 aa27.88■■■□□ 2.05
TPM4-204ENST00000586499 WAPLQ7Z5K2 1190 aa27.87■■■□□ 2.05
TPM4-204ENST00000586499 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
TPM4-204ENST00000586499 DCAF11Q8TEB1 546 aa27.86■■■□□ 2.05
TPM4-204ENST00000586499 ABCC11Q96J66 1382 aa27.84■■■□□ 2.05
TPM4-204ENST00000586499 YTHDC2Q9H6S0 1430 aaKnown RBP27.83■■■□□ 2.05
TPM4-204ENST00000586499 DHX57Q6P158 1386 aaKnown RBP27.82■■■□□ 2.04
TPM4-204ENST00000586499 PLEKHH1Q9ULM0 1364 aa27.82■■■□□ 2.04
TPM4-204ENST00000586499 TECPR2O15040 1411 aa27.82■■■□□ 2.04
TPM4-204ENST00000586499 COL16A1Q07092 1604 aaPredicted RBP27.81■■■□□ 2.04
TPM4-204ENST00000586499 AHDC1Q5TGY3 1603 aaPredicted RBP27.8■■■□□ 2.04
TPM4-204ENST00000586499 C1orf167Q5SNV9 1468 aa27.78■■■□□ 2.04
TPM4-204ENST00000586499 DDX17Q92841 729 aaKnown RBP27.78■■■□□ 2.04
TPM4-204ENST00000586499 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
TPM4-204ENST00000586499 JCADQ9P266 1359 aa27.77■■■□□ 2.04
TPM4-204ENST00000586499 KNDC1Q76NI1 1749 aa27.77■■■□□ 2.04
TPM4-204ENST00000586499 LAMC1P11047 1609 aa27.77■■■□□ 2.04
TPM4-204ENST00000586499 ORAI2Q96SN7 254 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms