RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 RIMS2Q9UQ26 1411 aa18.6■□□□□ 0.57
RETREG3-203ENST00000585894 MED14O60244 1454 aa18.59■□□□□ 0.57
RETREG3-203ENST00000585894 ZNF326Q5BKZ1 582 aaKnown RBP18.58■□□□□ 0.57
RETREG3-203ENST00000585894 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.57
RETREG3-203ENST00000585894 EID1Q9Y6B2 187 aa18.58■□□□□ 0.57
RETREG3-203ENST00000585894 ANKRD30BQ9BXX2 1392 aa18.58■□□□□ 0.56
RETREG3-203ENST00000585894 NEXMIFQ5QGS0 1516 aa18.56■□□□□ 0.56
RETREG3-203ENST00000585894 PPP1R15AO75807 674 aaPredicted RBP18.54■□□□□ 0.56
RETREG3-203ENST00000585894 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
RETREG3-203ENST00000585894 PPLO60437 1756 aa18.53■□□□□ 0.56
RETREG3-203ENST00000585894 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
RETREG3-203ENST00000585894 SPATA31E1Q6ZUB1 1445 aa18.53■□□□□ 0.56
RETREG3-203ENST00000585894 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-203ENST00000585894 IFT172Q9UG01 1749 aa18.51■□□□□ 0.55
RETREG3-203ENST00000585894 BCANQ96GW7 911 aa18.51■□□□□ 0.55
RETREG3-203ENST00000585894 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
RETREG3-203ENST00000585894 PLEKHG1Q9ULL1 1385 aa18.5■□□□□ 0.55
RETREG3-203ENST00000585894 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
RETREG3-203ENST00000585894 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.49■□□□□ 0.55
RETREG3-203ENST00000585894 NRXN3Q9Y4C0 1643 aa18.49■□□□□ 0.55
RETREG3-203ENST00000585894 HDGFP51858 240 aaKnown RBP18.48■□□□□ 0.55
RETREG3-203ENST00000585894 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
RETREG3-203ENST00000585894 ADAMTS13Q76LX8 1427 aa18.46■□□□□ 0.55
RETREG3-203ENST00000585894 SETBP1Q9Y6X0 1596 aa18.44■□□□□ 0.54
RETREG3-203ENST00000585894 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
RETREG3-203ENST00000585894 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
RETREG3-203ENST00000585894 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
RETREG3-203ENST00000585894 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
RETREG3-203ENST00000585894 VGFO15240 615 aaPredicted RBP18.4■□□□□ 0.54
RETREG3-203ENST00000585894 DIP2AQ14689 1571 aa18.4■□□□□ 0.54
RETREG3-203ENST00000585894 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
RETREG3-203ENST00000585894 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
RETREG3-203ENST00000585894 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
RETREG3-203ENST00000585894 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
RETREG3-203ENST00000585894 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
RETREG3-203ENST00000585894 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
RETREG3-203ENST00000585894 METP08581 1390 aa18.37■□□□□ 0.53
RETREG3-203ENST00000585894 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
RETREG3-203ENST00000585894 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
RETREG3-203ENST00000585894 CPS1P31327 1500 aa18.36■□□□□ 0.53
RETREG3-203ENST00000585894 MYOM2P54296 1465 aa18.36■□□□□ 0.53
RETREG3-203ENST00000585894 XIRP1Q702N8 1843 aaKnown RBP18.35■□□□□ 0.53
RETREG3-203ENST00000585894 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
RETREG3-203ENST00000585894 PIK3C2GO75747 1445 aa18.35■□□□□ 0.53
RETREG3-203ENST00000585894 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
RETREG3-203ENST00000585894 KCNA6P17658 529 aa18.34■□□□□ 0.53
RETREG3-203ENST00000585894 NRXN1Q9ULB1 1477 aa18.34■□□□□ 0.53
RETREG3-203ENST00000585894 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
RETREG3-203ENST00000585894 XRN1Q8IZH2 1706 aaKnown RBP18.32■□□□□ 0.52
RETREG3-203ENST00000585894 ASXL1Q8IXJ9 1541 aa18.32■□□□□ 0.52
RETREG3-203ENST00000585894 AMOTL2Q9Y2J4 779 aa18.3■□□□□ 0.52
RETREG3-203ENST00000585894 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
RETREG3-203ENST00000585894 PIK3R4Q99570 1358 aa18.29■□□□□ 0.52
RETREG3-203ENST00000585894 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
RETREG3-203ENST00000585894 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
RETREG3-203ENST00000585894 LAMC1P11047 1609 aa18.28■□□□□ 0.52
RETREG3-203ENST00000585894 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
RETREG3-203ENST00000585894 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
RETREG3-203ENST00000585894 TMEM94Q12767 1356 aa18.27■□□□□ 0.52
RETREG3-203ENST00000585894 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
RETREG3-203ENST00000585894 CCER1Q8TC90 406 aaPredicted RBP18.24■□□□□ 0.51
RETREG3-203ENST00000585894 STK26Q9P289 416 aa18.24■□□□□ 0.51
RETREG3-203ENST00000585894 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
RETREG3-203ENST00000585894 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
RETREG3-203ENST00000585894 ADGRB1O14514 1584 aa18.22■□□□□ 0.51
RETREG3-203ENST00000585894 TONSLQ96HA7 1378 aa18.22■□□□□ 0.51
RETREG3-203ENST00000585894 ROBO2Q9HCK4 1378 aa18.22■□□□□ 0.51
RETREG3-203ENST00000585894 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
RETREG3-203ENST00000585894 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
RETREG3-203ENST00000585894 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
RETREG3-203ENST00000585894 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
RETREG3-203ENST00000585894 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
RETREG3-203ENST00000585894 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
RETREG3-203ENST00000585894 KIAA1210Q9ULL0 1709 aa18.19■□□□□ 0.5
RETREG3-203ENST00000585894 C14orf37Q86TY3 774 aa18.18■□□□□ 0.5
RETREG3-203ENST00000585894 PTCH1Q13635 1447 aa18.18■□□□□ 0.5
RETREG3-203ENST00000585894 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.18■□□□□ 0.5
RETREG3-203ENST00000585894 TRPM1Q7Z4N2 1603 aa18.17■□□□□ 0.5
RETREG3-203ENST00000585894 NBPF1Q3BBV0 1214 aa18.17■□□□□ 0.5
RETREG3-203ENST00000585894 FBXO41Q8TF61 875 aa18.17■□□□□ 0.5
RETREG3-203ENST00000585894 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
RETREG3-203ENST00000585894 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
RETREG3-203ENST00000585894 TECPR2O15040 1411 aa18.15■□□□□ 0.5
RETREG3-203ENST00000585894 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
RETREG3-203ENST00000585894 ILDR1Q86SU0 546 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-203ENST00000585894 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
RETREG3-203ENST00000585894 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.5
RETREG3-203ENST00000585894 MSH6P52701 1360 aa18.14■□□□□ 0.49
RETREG3-203ENST00000585894 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
RETREG3-203ENST00000585894 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
RETREG3-203ENST00000585894 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
RETREG3-203ENST00000585894 ARHGEF28Q8N1W1 1705 aaKnown RBP18.13■□□□□ 0.49
RETREG3-203ENST00000585894 ADGRL3Q9HAR2 1447 aa18.12■□□□□ 0.49
RETREG3-203ENST00000585894 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
RETREG3-203ENST00000585894 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
RETREG3-203ENST00000585894 TOM1O60784 492 aa18.11■□□□□ 0.49
RETREG3-203ENST00000585894 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
RETREG3-203ENST00000585894 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
RETREG3-203ENST00000585894 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
RETREG3-203ENST00000585894 FAM135BQ49AJ0 1406 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms