RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PPP2R1AP30153 589 aa18.76■□□□□ 0.59
CDK5RAP3-237ENST00000585163 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-237ENST00000585163 PLIN1O60240 522 aa18.76■□□□□ 0.59
CDK5RAP3-237ENST00000585163 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
CDK5RAP3-237ENST00000585163 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
CDK5RAP3-237ENST00000585163 PDE4AP27815 886 aa18.74■□□□□ 0.59
CDK5RAP3-237ENST00000585163 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
CDK5RAP3-237ENST00000585163 TET3O43151 1660 aa18.73■□□□□ 0.59
CDK5RAP3-237ENST00000585163 BACH2Q9BYV9 841 aa18.73■□□□□ 0.59
CDK5RAP3-237ENST00000585163 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
CDK5RAP3-237ENST00000585163 ASXL1Q8IXJ9 1541 aa18.72■□□□□ 0.59
CDK5RAP3-237ENST00000585163 NBR1Q14596 966 aa18.72■□□□□ 0.59
CDK5RAP3-237ENST00000585163 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDK5RAP3-237ENST00000585163 NPC1L1Q9UHC9 1359 aa18.71■□□□□ 0.59
CDK5RAP3-237ENST00000585163 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
CDK5RAP3-237ENST00000585163 DEKP35659 375 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-237ENST00000585163 MYOM1P52179 1685 aa18.71■□□□□ 0.59
CDK5RAP3-237ENST00000585163 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.58
CDK5RAP3-237ENST00000585163 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
CDK5RAP3-237ENST00000585163 KIAA1210Q9ULL0 1709 aa18.7■□□□□ 0.58
CDK5RAP3-237ENST00000585163 ZNF521Q96K83 1311 aa18.7■□□□□ 0.58
CDK5RAP3-237ENST00000585163 NEURL4Q96JN8 1562 aa18.7■□□□□ 0.58
CDK5RAP3-237ENST00000585163 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP3-237ENST00000585163 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
CDK5RAP3-237ENST00000585163 INO80Q9ULG1 1556 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-237ENST00000585163 KANK1Q14678 1352 aa18.67■□□□□ 0.58
CDK5RAP3-237ENST00000585163 ATP7AQ04656 1500 aa18.67■□□□□ 0.58
CDK5RAP3-237ENST00000585163 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
CDK5RAP3-237ENST00000585163 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-237ENST00000585163 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-237ENST00000585163 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
CDK5RAP3-237ENST00000585163 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
CDK5RAP3-237ENST00000585163 FANCAO15360 1455 aa18.63■□□□□ 0.57
CDK5RAP3-237ENST00000585163 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
CDK5RAP3-237ENST00000585163 MYOM2P54296 1465 aa18.63■□□□□ 0.57
CDK5RAP3-237ENST00000585163 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
CDK5RAP3-237ENST00000585163 KIF3BO15066 747 aa18.61■□□□□ 0.57
CDK5RAP3-237ENST00000585163 MROH1Q8NDA8 1641 aa18.61■□□□□ 0.57
CDK5RAP3-237ENST00000585163 SLFN5Q08AF3 891 aa18.61■□□□□ 0.57
CDK5RAP3-237ENST00000585163 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-237ENST00000585163 ERVK-7P63135 1459 aa18.6■□□□□ 0.57
CDK5RAP3-237ENST00000585163 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-237ENST00000585163 ABCA6Q8N139 1617 aa18.6■□□□□ 0.57
CDK5RAP3-237ENST00000585163 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
CDK5RAP3-237ENST00000585163 CENPQQ7L2Z9 268 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP3-237ENST00000585163 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
CDK5RAP3-237ENST00000585163 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP3-237ENST00000585163 UGGT1Q9NYU2 1555 aa18.58■□□□□ 0.56
CDK5RAP3-237ENST00000585163 KIF1BO60333 1816 aa18.57■□□□□ 0.56
CDK5RAP3-237ENST00000585163 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
CDK5RAP3-237ENST00000585163 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
CDK5RAP3-237ENST00000585163 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
CDK5RAP3-237ENST00000585163 EIF5BO60841 1220 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-237ENST00000585163 EFCAB6Q5THR3 1501 aa18.56■□□□□ 0.56
CDK5RAP3-237ENST00000585163 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
CDK5RAP3-237ENST00000585163 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
CDK5RAP3-237ENST00000585163 NKTRP30414 1462 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-237ENST00000585163 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
CDK5RAP3-237ENST00000585163 APAF1O14727 1248 aa18.54■□□□□ 0.56
CDK5RAP3-237ENST00000585163 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
CDK5RAP3-237ENST00000585163 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
CDK5RAP3-237ENST00000585163 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
CDK5RAP3-237ENST00000585163 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP3-237ENST00000585163 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
CDK5RAP3-237ENST00000585163 DDRGK1Q96HY6 314 aa18.52■□□□□ 0.55
CDK5RAP3-237ENST00000585163 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-237ENST00000585163 LMTK2Q8IWU2 1503 aa18.51■□□□□ 0.55
CDK5RAP3-237ENST00000585163 E9PSI1 815 aa18.51■□□□□ 0.55
CDK5RAP3-237ENST00000585163 KIDINS220Q9ULH0 1771 aa18.5■□□□□ 0.55
CDK5RAP3-237ENST00000585163 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
CDK5RAP3-237ENST00000585163 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
CDK5RAP3-237ENST00000585163 POLR3AO14802 1390 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP3-237ENST00000585163 ADGRB3O60242 1522 aa18.48■□□□□ 0.55
CDK5RAP3-237ENST00000585163 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP3-237ENST00000585163 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-237ENST00000585163 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
CDK5RAP3-237ENST00000585163 CENPJQ9HC77 1338 aaPredicted RBP18.46■□□□□ 0.55
CDK5RAP3-237ENST00000585163 BCAR3O75815 825 aa18.46■□□□□ 0.55
CDK5RAP3-237ENST00000585163 NOS1P29475 1434 aa18.46■□□□□ 0.55
CDK5RAP3-237ENST00000585163 C8orf34Q49A92 452 aa18.46■□□□□ 0.55
CDK5RAP3-237ENST00000585163 ASXL2Q76L83 1435 aa18.46■□□□□ 0.55
CDK5RAP3-237ENST00000585163 NEFMP07197 916 aa18.45■□□□□ 0.54
CDK5RAP3-237ENST00000585163 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
CDK5RAP3-237ENST00000585163 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
CDK5RAP3-237ENST00000585163 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
CDK5RAP3-237ENST00000585163 ZC3H13Q5T200 1668 aaKnown RBP18.42■□□□□ 0.54
CDK5RAP3-237ENST00000585163 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
CDK5RAP3-237ENST00000585163 NSD3Q9BZ95 1437 aa18.42■□□□□ 0.54
CDK5RAP3-237ENST00000585163 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
CDK5RAP3-237ENST00000585163 PPLO60437 1756 aa18.41■□□□□ 0.54
CDK5RAP3-237ENST00000585163 C14orf93Q9H972 538 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-237ENST00000585163 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
CDK5RAP3-237ENST00000585163 ADGRB1O14514 1584 aa18.4■□□□□ 0.54
CDK5RAP3-237ENST00000585163 NPATQ14207 1427 aa18.4■□□□□ 0.54
CDK5RAP3-237ENST00000585163 QRICH2Q9H0J4 1663 aa18.4■□□□□ 0.54
CDK5RAP3-237ENST00000585163 CGNL1Q0VF96 1302 aa18.4■□□□□ 0.54
CDK5RAP3-237ENST00000585163 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
CDK5RAP3-237ENST00000585163 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
CDK5RAP3-237ENST00000585163 RGS3P49796 1198 aa18.39■□□□□ 0.53
CDK5RAP3-237ENST00000585163 CHGAP10645 457 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms