RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 BCL9LQ86UU0 1499 aa17.75■□□□□ 0.43
CCDC47-206ENST00000584112 PLEKHH2Q8IVE3 1493 aa17.75■□□□□ 0.43
CCDC47-206ENST00000584112 CCNB3Q8WWL7 1395 aa17.75■□□□□ 0.43
CCDC47-206ENST00000584112 TET3O43151 1660 aa17.74■□□□□ 0.43
CCDC47-206ENST00000584112 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
CCDC47-206ENST00000584112 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
CCDC47-206ENST00000584112 USP21Q9UK80 565 aa17.72■□□□□ 0.43
CCDC47-206ENST00000584112 CEP350Q5VT06 3117 aa17.72■□□□□ 0.43
CCDC47-206ENST00000584112 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
CCDC47-206ENST00000584112 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
CCDC47-206ENST00000584112 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
CCDC47-206ENST00000584112 ZNF644Q9H582 1327 aaPredicted RBP17.71■□□□□ 0.42
CCDC47-206ENST00000584112 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-206ENST00000584112 ATRNO75882 1429 aa17.69■□□□□ 0.42
CCDC47-206ENST00000584112 SETD5Q9C0A6 1442 aa17.69■□□□□ 0.42
CCDC47-206ENST00000584112 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
CCDC47-206ENST00000584112 PNPLA6Q8IY17 1366 aa17.67■□□□□ 0.42
CCDC47-206ENST00000584112 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
CCDC47-206ENST00000584112 VPS8Q8N3P4 1428 aa17.66■□□□□ 0.42
CCDC47-206ENST00000584112 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
CCDC47-206ENST00000584112 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
CCDC47-206ENST00000584112 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
CCDC47-206ENST00000584112 DDX17Q92841 729 aaKnown RBP17.65■□□□□ 0.42
CCDC47-206ENST00000584112 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
CCDC47-206ENST00000584112 ATF3P18847 181 aa17.64■□□□□ 0.41
CCDC47-206ENST00000584112 CADPS2Q86UW7 1296 aa17.64■□□□□ 0.41
CCDC47-206ENST00000584112 CEP152O94986 1710 aa17.63■□□□□ 0.41
CCDC47-206ENST00000584112 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
CCDC47-206ENST00000584112 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
CCDC47-206ENST00000584112 ZNF784Q8NCA9 323 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-206ENST00000584112 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
CCDC47-206ENST00000584112 BCANQ96GW7 911 aa17.62■□□□□ 0.41
CCDC47-206ENST00000584112 C1QTNF8P60827 252 aa17.61■□□□□ 0.41
CCDC47-206ENST00000584112 R3HDM1Q15032 1099 aaKnown RBP17.61■□□□□ 0.41
CCDC47-206ENST00000584112 CAMSAP2Q08AD1 1489 aa17.6■□□□□ 0.41
CCDC47-206ENST00000584112 BRWD3Q6RI45 1802 aa17.6■□□□□ 0.41
CCDC47-206ENST00000584112 FNBP4Q8N3X1 1017 aaPredicted RBP17.59■□□□□ 0.41
CCDC47-206ENST00000584112 STAG3Q9UJ98 1225 aa17.59■□□□□ 0.41
CCDC47-206ENST00000584112 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.4
CCDC47-206ENST00000584112 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.4
CCDC47-206ENST00000584112 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
CCDC47-206ENST00000584112 EFCAB6Q5THR3 1501 aa17.56■□□□□ 0.4
CCDC47-206ENST00000584112 CCDC141Q6ZP82 1450 aa17.56■□□□□ 0.4
CCDC47-206ENST00000584112 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
CCDC47-206ENST00000584112 UNC13BO14795 1591 aa17.53■□□□□ 0.4
CCDC47-206ENST00000584112 RSPH4AQ5TD94 716 aa17.52■□□□□ 0.4
CCDC47-206ENST00000584112 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
CCDC47-206ENST00000584112 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.39
CCDC47-206ENST00000584112 IDI1Q13907 227 aa17.48■□□□□ 0.39
CCDC47-206ENST00000584112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.48■□□□□ 0.395e-8■□□□□ 11.3
CCDC47-206ENST00000584112 GLI3P10071 1580 aa17.48■□□□□ 0.39
CCDC47-206ENST00000584112 BAG6P46379 1132 aa17.47■□□□□ 0.39
CCDC47-206ENST00000584112 UTRNP46939 3433 aa17.47■□□□□ 0.39
CCDC47-206ENST00000584112 MST1RQ04912 1400 aa17.47■□□□□ 0.39
CCDC47-206ENST00000584112 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
CCDC47-206ENST00000584112 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
CCDC47-206ENST00000584112 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
CCDC47-206ENST00000584112 APLP2Q06481 763 aa17.46■□□□□ 0.39
CCDC47-206ENST00000584112 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
CCDC47-206ENST00000584112 RALGAPBQ86X10 1494 aa17.44■□□□□ 0.38
CCDC47-206ENST00000584112 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
CCDC47-206ENST00000584112 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
CCDC47-206ENST00000584112 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
CCDC47-206ENST00000584112 CROCC2H7BZ55 1655 aa17.44■□□□□ 0.38
CCDC47-206ENST00000584112 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
CCDC47-206ENST00000584112 EIF2AK4Q9P2K8 1649 aaKnown RBP17.42■□□□□ 0.38
CCDC47-206ENST00000584112 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
CCDC47-206ENST00000584112 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
CCDC47-206ENST00000584112 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
CCDC47-206ENST00000584112 PTPN23Q9H3S7 1636 aa17.4■□□□□ 0.38
CCDC47-206ENST00000584112 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
CCDC47-206ENST00000584112 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
CCDC47-206ENST00000584112 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
CCDC47-206ENST00000584112 MARF1Q9Y4F3 1742 aaKnown RBP17.38■□□□□ 0.37
CCDC47-206ENST00000584112 DCCP43146 1447 aa17.38■□□□□ 0.37
CCDC47-206ENST00000584112 PPP1R1BQ9UD71 204 aaPredicted RBP17.37■□□□□ 0.37
CCDC47-206ENST00000584112 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
CCDC47-206ENST00000584112 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
CCDC47-206ENST00000584112 ZFYVE9O95405 1425 aa17.35■□□□□ 0.37
CCDC47-206ENST00000584112 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
CCDC47-206ENST00000584112 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.37
CCDC47-206ENST00000584112 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.37
CCDC47-206ENST00000584112 MYOM2P54296 1465 aa17.33■□□□□ 0.37
CCDC47-206ENST00000584112 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
CCDC47-206ENST00000584112 PTPRUQ92729 1446 aa17.33■□□□□ 0.36
CCDC47-206ENST00000584112 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.36
CCDC47-206ENST00000584112 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
CCDC47-206ENST00000584112 AMOTL2Q9Y2J4 779 aa17.32■□□□□ 0.36
CCDC47-206ENST00000584112 RIMS2Q9UQ26 1411 aa17.31■□□□□ 0.36
CCDC47-206ENST00000584112 SOS2Q07890 1332 aaPredicted RBP17.31■□□□□ 0.36
CCDC47-206ENST00000584112 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
CCDC47-206ENST00000584112 CHD4Q14839 1912 aa17.3■□□□□ 0.36
CCDC47-206ENST00000584112 TRPM2O94759 1503 aa17.3■□□□□ 0.36
CCDC47-206ENST00000584112 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
CCDC47-206ENST00000584112 LAMC1P11047 1609 aa17.29■□□□□ 0.36
CCDC47-206ENST00000584112 ABCC5O15440 1437 aa17.28■□□□□ 0.36
CCDC47-206ENST00000584112 DAPK1P53355 1430 aa17.28■□□□□ 0.36
CCDC47-206ENST00000584112 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
CCDC47-206ENST00000584112 FAM182BQ5T319 152 aa17.27■□□□□ 0.36
CCDC47-206ENST00000584112 CAPN15O75808 1086 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms