RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZFYVE9O95405 1425 aa30.6■■■□□ 2.49
SS18-224ENST00000584083 SLC26A8Q96RN1 970 aa30.6■■■□□ 2.49
SS18-224ENST00000584083 SENP3Q9H4L4 574 aaPredicted RBP30.6■■■□□ 2.49
SS18-224ENST00000584083 SLC4A1APQ9BWU0 796 aaKnown RBP30.58■■■□□ 2.49
SS18-224ENST00000584083 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.57■■■□□ 2.48
SS18-224ENST00000584083 NUTM2DQ5VT03 806 aaPredicted RBP30.54■■■□□ 2.48
SS18-224ENST00000584083 LRRC7Q96NW7 1537 aa30.53■■■□□ 2.48
SS18-224ENST00000584083 PLEKHG1Q9ULL1 1385 aa30.53■■■□□ 2.48
SS18-224ENST00000584083 TOM1O60784 492 aa30.51■■■□□ 2.47
SS18-224ENST00000584083 TRPM2O94759 1503 aa30.51■■■□□ 2.47
SS18-224ENST00000584083 CLTCL1P53675 1640 aa30.5■■■□□ 2.47
SS18-224ENST00000584083 ZNF326Q5BKZ1 582 aaKnown RBP30.49■■■□□ 2.47
SS18-224ENST00000584083 SCAF1Q9H7N4 1312 aaKnown RBP30.47■■■□□ 2.47
SS18-224ENST00000584083 KIF1BO60333 1816 aa30.47■■■□□ 2.47
SS18-224ENST00000584083 KCNA6P17658 529 aa30.47■■■□□ 2.47
SS18-224ENST00000584083 PIP4K2BP78356 416 aa30.46■■■□□ 2.47
SS18-224ENST00000584083 SETD5Q9C0A6 1442 aa30.45■■■□□ 2.46
SS18-224ENST00000584083 FOXD1Q16676 465 aa30.42■■■□□ 2.46
SS18-224ENST00000584083 XIRP1Q702N8 1843 aaKnown RBP30.41■■■□□ 2.46
SS18-224ENST00000584083 MPHOSPH9Q99550 1183 aa30.41■■■□□ 2.46
SS18-224ENST00000584083 TBX22Q9Y458 520 aa30.41■■■□□ 2.46
SS18-224ENST00000584083 PROSER2Q86WR7 435 aaPredicted RBP30.4■■■□□ 2.46
SS18-224ENST00000584083 ACIN1Q9UKV3 1341 aaKnown RBP30.4■■■□□ 2.46
SS18-224ENST00000584083 CHD2O14647 1828 aaKnown RBP30.39■■■□□ 2.46
SS18-224ENST00000584083 NWD1Q149M9 1564 aa30.37■■■□□ 2.45
SS18-224ENST00000584083 ADAMTS13Q76LX8 1427 aa30.37■■■□□ 2.45
SS18-224ENST00000584083 TMEM94Q12767 1356 aa30.36■■■□□ 2.45
SS18-224ENST00000584083 DIP2AQ14689 1571 aa30.36■■■□□ 2.45
SS18-224ENST00000584083 NKTRP30414 1462 aaKnown RBP30.35■■■□□ 2.45
SS18-224ENST00000584083 RBM33Q96EV2 1170 aaKnown RBP30.34■■■□□ 2.45
SS18-224ENST00000584083 ALKQ9UM73 1620 aa30.33■■■□□ 2.45
SS18-224ENST00000584083 RAB3GAP2Q9H2M9 1393 aa30.33■■■□□ 2.45
SS18-224ENST00000584083 NEXMIFQ5QGS0 1516 aa30.32■■■□□ 2.44
SS18-224ENST00000584083 PIK3R4Q99570 1358 aa30.28■■■□□ 2.44
SS18-224ENST00000584083 CCDC144AA2RUR9 1427 aa30.28■■■□□ 2.44
SS18-224ENST00000584083 SETBP1Q9Y6X0 1596 aa30.28■■■□□ 2.44
SS18-224ENST00000584083 NRXN3Q9Y4C0 1643 aa30.27■■■□□ 2.44
SS18-224ENST00000584083 HSPA1LP34931 641 aa30.26■■■□□ 2.43
SS18-224ENST00000584083 VGFO15240 615 aaPredicted RBP30.24■■■□□ 2.43
SS18-224ENST00000584083 RPGRIP1LQ68CZ1 1315 aa30.23■■■□□ 2.43
SS18-224ENST00000584083 AMOTL2Q9Y2J4 779 aa30.22■■■□□ 2.43
SS18-224ENST00000584083 MSH6P52701 1360 aa30.21■■■□□ 2.43
SS18-224ENST00000584083 PPLO60437 1756 aa30.2■■■□□ 2.43
SS18-224ENST00000584083 C14orf37Q86TY3 774 aa30.2■■■□□ 2.43
SS18-224ENST00000584083 RGL3Q3MIN7 710 aa30.19■■■□□ 2.42
SS18-224ENST00000584083 PTPRUQ92729 1446 aa30.19■■■□□ 2.42
SS18-224ENST00000584083 METP08581 1390 aa30.16■■■□□ 2.42
SS18-224ENST00000584083 NCOA3Q9Y6Q9 1424 aa30.13■■■□□ 2.41
SS18-224ENST00000584083 XRN1Q8IZH2 1706 aaKnown RBP30.13■■■□□ 2.41
SS18-224ENST00000584083 SPATA31E1Q6ZUB1 1445 aa30.13■■■□□ 2.41
SS18-224ENST00000584083 HRCP23327 699 aa30.12■■■□□ 2.41
SS18-224ENST00000584083 DISP3Q9P2K9 1392 aa30.11■■■□□ 2.41
SS18-224ENST00000584083 FAM135BQ49AJ0 1406 aa30.09■■■□□ 2.41
SS18-224ENST00000584083 C19orf44Q9H6X5 657 aa30.08■■■□□ 2.41
SS18-224ENST00000584083 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
SS18-224ENST00000584083 SETD1AO15047 1707 aaKnown RBP30.07■■■□□ 2.4
SS18-224ENST00000584083 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.07■■■□□ 2.4
SS18-224ENST00000584083 IFT172Q9UG01 1749 aa30.07■■■□□ 2.4
SS18-224ENST00000584083 ANKRD30BQ9BXX2 1392 aa30.06■■■□□ 2.4
SS18-224ENST00000584083 ROBO1Q9Y6N7 1651 aa30.06■■■□□ 2.4
SS18-224ENST00000584083 ADGRF5Q8IZF2 1346 aa30.05■■■□□ 2.4
SS18-224ENST00000584083 ATF3P18847 181 aa30.05■■■□□ 2.4
SS18-224ENST00000584083 CADPS2Q86UW7 1296 aa30.03■■■□□ 2.4
SS18-224ENST00000584083 DCCP43146 1447 aa29.93■■■□□ 2.38
SS18-224ENST00000584083 ROBO2Q9HCK4 1378 aa29.92■■■□□ 2.38
SS18-224ENST00000584083 PTCH1Q13635 1447 aa29.92■■■□□ 2.38
SS18-224ENST00000584083 MED1Q15648 1581 aaPredicted RBP29.92■■■□□ 2.38
SS18-224ENST00000584083 NALCNQ8IZF0 1738 aa29.91■■■□□ 2.38
SS18-224ENST00000584083 PIK3C2GO75747 1445 aa29.91■■■□□ 2.38
SS18-224ENST00000584083 ADGRL3Q9HAR2 1447 aa29.91■■■□□ 2.38
SS18-224ENST00000584083 PHLPP1O60346 1717 aa29.91■■■□□ 2.38
SS18-224ENST00000584083 STK26Q9P289 416 aa29.89■■■□□ 2.38
SS18-224ENST00000584083 TMEM132EQ6IEE7 984 aa29.88■■■□□ 2.37
SS18-224ENST00000584083 PRAG1Q86YV5 1406 aa29.88■■■□□ 2.37
SS18-224ENST00000584083 MYOM2P54296 1465 aa29.87■■■□□ 2.37
SS18-224ENST00000584083 NRXN1Q9ULB1 1477 aa29.83■■■□□ 2.37
SS18-224ENST00000584083 MST1RQ04912 1400 aa29.83■■■□□ 2.37
SS18-224ENST00000584083 LRPPRCP42704 1394 aaKnown RBP29.83■■■□□ 2.37
SS18-224ENST00000584083 C14orf93Q9H972 538 aaKnown RBP29.83■■■□□ 2.37
SS18-224ENST00000584083 ASXL1Q8IXJ9 1541 aa29.82■■■□□ 2.36
SS18-224ENST00000584083 CFAP70Q5T0N1 1121 aa29.82■■■□□ 2.36
SS18-224ENST00000584083 BRINP3Q76B58 766 aa29.82■■■□□ 2.36
SS18-224ENST00000584083 KDM2AQ9Y2K7 1162 aa29.82■■■□□ 2.36
SS18-224ENST00000584083 DCAF11Q8TEB1 546 aa29.81■■■□□ 2.36
SS18-224ENST00000584083 LAMC1P11047 1609 aa29.81■■■□□ 2.36
SS18-224ENST00000584083 ILDR2Q71H61 639 aa29.8■■■□□ 2.36
SS18-224ENST00000584083 PHF23Q9BUL5 403 aaPredicted RBP29.8■■■□□ 2.36
SS18-224ENST00000584083 ABCC11Q96J66 1382 aa29.78■■■□□ 2.36
SS18-224ENST00000584083 KNDC1Q76NI1 1749 aa29.78■■■□□ 2.36
SS18-224ENST00000584083 TECPR2O15040 1411 aa29.78■■■□□ 2.36
SS18-224ENST00000584083 YTHDC2Q9H6S0 1430 aaKnown RBP29.78■■■□□ 2.36
SS18-224ENST00000584083 WAPLQ7Z5K2 1190 aa29.77■■■□□ 2.36
SS18-224ENST00000584083 COL16A1Q07092 1604 aaPredicted RBP29.77■■■□□ 2.36
SS18-224ENST00000584083 AHDC1Q5TGY3 1603 aaPredicted RBP29.77■■■□□ 2.36
SS18-224ENST00000584083 DHX57Q6P158 1386 aaKnown RBP29.76■■■□□ 2.35
SS18-224ENST00000584083 JCADQ9P266 1359 aa29.74■■■□□ 2.35
SS18-224ENST00000584083 STAC3Q96MF2 364 aa29.73■■■□□ 2.35
SS18-224ENST00000584083 C1orf167Q5SNV9 1468 aa29.73■■■□□ 2.35
SS18-224ENST00000584083 PLEKHH1Q9ULM0 1364 aa29.7■■■□□ 2.35
SS18-224ENST00000584083 NHSL1Q5SYE7 1610 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms