RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
RNF43-207ENST00000583753 AFAP1Q8N556 730 aa13.36□□□□□ -0.27
RNF43-207ENST00000583753 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
RNF43-207ENST00000583753 CUL7Q14999 1698 aa13.36□□□□□ -0.27
RNF43-207ENST00000583753 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
RNF43-207ENST00000583753 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
RNF43-207ENST00000583753 MTHFSP49914 203 aa13.35□□□□□ -0.27
RNF43-207ENST00000583753 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
RNF43-207ENST00000583753 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
RNF43-207ENST00000583753 TESK2Q96S53 571 aa13.34□□□□□ -0.27
RNF43-207ENST00000583753 TRAK2O60296 914 aa13.34□□□□□ -0.27
RNF43-207ENST00000583753 IQGAP2Q13576 1575 aa13.34□□□□□ -0.27
RNF43-207ENST00000583753 PARD3Q8TEW0 1356 aa13.34□□□□□ -0.27
RNF43-207ENST00000583753 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.27
RNF43-207ENST00000583753 SOX12O15370 315 aa13.33□□□□□ -0.28
RNF43-207ENST00000583753 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
RNF43-207ENST00000583753 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
RNF43-207ENST00000583753 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
RNF43-207ENST00000583753 SPAG9O60271 1321 aaKnown RBP13.33□□□□□ -0.28
RNF43-207ENST00000583753 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
RNF43-207ENST00000583753 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
RNF43-207ENST00000583753 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
RNF43-207ENST00000583753 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
RNF43-207ENST00000583753 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
RNF43-207ENST00000583753 WWC1Q8IX03 1113 aa13.32□□□□□ -0.28
RNF43-207ENST00000583753 DZIP1LQ8IYY4 767 aaKnown RBP13.32□□□□□ -0.28
RNF43-207ENST00000583753 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
RNF43-207ENST00000583753 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
RNF43-207ENST00000583753 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
RNF43-207ENST00000583753 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
RNF43-207ENST00000583753 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
RNF43-207ENST00000583753 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
RNF43-207ENST00000583753 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
RNF43-207ENST00000583753 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
RNF43-207ENST00000583753 PTPRGP23470 1445 aa13.3□□□□□ -0.28
RNF43-207ENST00000583753 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
RNF43-207ENST00000583753 GPATCH8Q9UKJ3 1502 aaKnown RBP13.3□□□□□ -0.28
RNF43-207ENST00000583753 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
RNF43-207ENST00000583753 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
RNF43-207ENST00000583753 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
RNF43-207ENST00000583753 RLBP1P12271 317 aa13.29□□□□□ -0.28
RNF43-207ENST00000583753 MCM4P33991 863 aa13.29□□□□□ -0.28
RNF43-207ENST00000583753 KDM2BQ8NHM5 1336 aa13.29□□□□□ -0.28
RNF43-207ENST00000583753 PTMAP06454 111 aaKnown RBP13.29□□□□□ -0.28
RNF43-207ENST00000583753 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
RNF43-207ENST00000583753 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
RNF43-207ENST00000583753 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.284e-7■■□□□ 13.6
RNF43-207ENST00000583753 NUP153P49790 1475 aaKnown RBP13.28□□□□□ -0.28
RNF43-207ENST00000583753 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
RNF43-207ENST00000583753 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
RNF43-207ENST00000583753 GBP4Q96PP9 640 aa13.28□□□□□ -0.28
RNF43-207ENST00000583753 DNTTIP2Q5QJE6 756 aaKnown RBP13.28□□□□□ -0.28
RNF43-207ENST00000583753 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.28
RNF43-207ENST00000583753 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
RNF43-207ENST00000583753 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.29
RNF43-207ENST00000583753 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
RNF43-207ENST00000583753 BCORL1Q5H9F3 1711 aa13.26□□□□□ -0.29
RNF43-207ENST00000583753 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
RNF43-207ENST00000583753 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
RNF43-207ENST00000583753 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
RNF43-207ENST00000583753 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■□□□□ 8.9
RNF43-207ENST00000583753 RIPK4P57078 832 aa13.25□□□□□ -0.29
RNF43-207ENST00000583753 KANK1Q14678 1352 aa13.24□□□□□ -0.29
RNF43-207ENST00000583753 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
RNF43-207ENST00000583753 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
RNF43-207ENST00000583753 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
RNF43-207ENST00000583753 IPO8O15397 1037 aaKnown RBP13.24□□□□□ -0.29
RNF43-207ENST00000583753 MPNDQ8N594 471 aa13.24□□□□□ -0.29
RNF43-207ENST00000583753 HMOX1P09601 288 aa13.23□□□□□ -0.29
RNF43-207ENST00000583753 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
RNF43-207ENST00000583753 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
RNF43-207ENST00000583753 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
RNF43-207ENST00000583753 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
RNF43-207ENST00000583753 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
RNF43-207ENST00000583753 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
RNF43-207ENST00000583753 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
RNF43-207ENST00000583753 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.3
RNF43-207ENST00000583753 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.3
RNF43-207ENST00000583753 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 MRE11P49959 708 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
RNF43-207ENST00000583753 WDR62O43379 1518 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
RNF43-207ENST00000583753 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 MCTP1Q6DN14 999 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
RNF43-207ENST00000583753 FBLN1P23142 703 aa13.19□□□□□ -0.3
RNF43-207ENST00000583753 SSH1Q8WYL5 1049 aa13.19□□□□□ -0.3
RNF43-207ENST00000583753 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
RNF43-207ENST00000583753 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
RNF43-207ENST00000583753 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
RNF43-207ENST00000583753 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
RNF43-207ENST00000583753 ESPNB1AK53 854 aa13.17□□□□□ -0.3
RNF43-207ENST00000583753 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
RNF43-207ENST00000583753 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms