RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
ERBB2-215ENST00000583391 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
ERBB2-215ENST00000583391 NCKAP5LQ9HCH0 1330 aa18.98■□□□□ 0.63
ERBB2-215ENST00000583391 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
ERBB2-215ENST00000583391 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
ERBB2-215ENST00000583391 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
ERBB2-215ENST00000583391 NUTM2DQ5VT03 806 aaPredicted RBP18.96■□□□□ 0.63
ERBB2-215ENST00000583391 LTKP29376 864 aa18.95■□□□□ 0.62
ERBB2-215ENST00000583391 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
ERBB2-215ENST00000583391 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
ERBB2-215ENST00000583391 EID1Q9Y6B2 187 aa18.95■□□□□ 0.62
ERBB2-215ENST00000583391 MED14O60244 1454 aa18.95■□□□□ 0.62
ERBB2-215ENST00000583391 NPHP4O75161 1426 aaPredicted RBP18.94■□□□□ 0.62
ERBB2-215ENST00000583391 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
ERBB2-215ENST00000583391 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
ERBB2-215ENST00000583391 SETD1AO15047 1707 aaKnown RBP18.93■□□□□ 0.62
ERBB2-215ENST00000583391 MYOM2P54296 1465 aa18.92■□□□□ 0.62
ERBB2-215ENST00000583391 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
ERBB2-215ENST00000583391 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
ERBB2-215ENST00000583391 SETBP1Q9Y6X0 1596 aa18.92■□□□□ 0.62
ERBB2-215ENST00000583391 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
ERBB2-215ENST00000583391 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
ERBB2-215ENST00000583391 PLEKHG1Q9ULL1 1385 aa18.91■□□□□ 0.62
ERBB2-215ENST00000583391 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
ERBB2-215ENST00000583391 LAMC1P11047 1609 aa18.89■□□□□ 0.62
ERBB2-215ENST00000583391 HDGFP51858 240 aaKnown RBP18.89■□□□□ 0.61
ERBB2-215ENST00000583391 TONSLQ96HA7 1378 aa18.87■□□□□ 0.61
ERBB2-215ENST00000583391 NRXN1Q9ULB1 1477 aa18.87■□□□□ 0.61
ERBB2-215ENST00000583391 BCANQ96GW7 911 aa18.86■□□□□ 0.61
ERBB2-215ENST00000583391 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
ERBB2-215ENST00000583391 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
ERBB2-215ENST00000583391 PIK3C2GO75747 1445 aa18.85■□□□□ 0.61
ERBB2-215ENST00000583391 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
ERBB2-215ENST00000583391 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-215ENST00000583391 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
ERBB2-215ENST00000583391 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
ERBB2-215ENST00000583391 ADAMTS13Q76LX8 1427 aa18.84■□□□□ 0.61
ERBB2-215ENST00000583391 KDM2AQ9Y2K7 1162 aa18.84■□□□□ 0.61
ERBB2-215ENST00000583391 KIAA1210Q9ULL0 1709 aa18.83■□□□□ 0.61
ERBB2-215ENST00000583391 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
ERBB2-215ENST00000583391 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
ERBB2-215ENST00000583391 SLC26A8Q96RN1 970 aa18.81■□□□□ 0.6
ERBB2-215ENST00000583391 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
ERBB2-215ENST00000583391 NWD1Q149M9 1564 aa18.81■□□□□ 0.6
ERBB2-215ENST00000583391 ASXL1Q8IXJ9 1541 aa18.8■□□□□ 0.6
ERBB2-215ENST00000583391 PRAG1Q86YV5 1406 aa18.79■□□□□ 0.6
ERBB2-215ENST00000583391 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
ERBB2-215ENST00000583391 KNDC1Q76NI1 1749 aa18.77■□□□□ 0.6
ERBB2-215ENST00000583391 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-215ENST00000583391 METP08581 1390 aa18.74■□□□□ 0.59
ERBB2-215ENST00000583391 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
ERBB2-215ENST00000583391 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
ERBB2-215ENST00000583391 XIRP1Q702N8 1843 aaKnown RBP18.74■□□□□ 0.59
ERBB2-215ENST00000583391 ADGRB1O14514 1584 aa18.73■□□□□ 0.59
ERBB2-215ENST00000583391 LTBP4Q8N2S1 1624 aa18.72■□□□□ 0.59
ERBB2-215ENST00000583391 PTPRUQ92729 1446 aa18.72■□□□□ 0.59
ERBB2-215ENST00000583391 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
ERBB2-215ENST00000583391 PIK3R4Q99570 1358 aa18.71■□□□□ 0.59
ERBB2-215ENST00000583391 CFAP70Q5T0N1 1121 aa18.71■□□□□ 0.59
ERBB2-215ENST00000583391 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
ERBB2-215ENST00000583391 CPS1P31327 1500 aa18.7■□□□□ 0.58
ERBB2-215ENST00000583391 C14orf93Q9H972 538 aaKnown RBP18.69■□□□□ 0.58
ERBB2-215ENST00000583391 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
ERBB2-215ENST00000583391 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
ERBB2-215ENST00000583391 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
ERBB2-215ENST00000583391 TMEM132EQ6IEE7 984 aa18.67■□□□□ 0.58
ERBB2-215ENST00000583391 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
ERBB2-215ENST00000583391 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
ERBB2-215ENST00000583391 KCNA6P17658 529 aa18.65■□□□□ 0.58
ERBB2-215ENST00000583391 PTCH1Q13635 1447 aa18.65■□□□□ 0.58
ERBB2-215ENST00000583391 AMOTL2Q9Y2J4 779 aa18.64■□□□□ 0.57
ERBB2-215ENST00000583391 ROCK2O75116 1388 aaKnown RBP18.64■□□□□ 0.57
ERBB2-215ENST00000583391 LRPPRCP42704 1394 aaKnown RBP18.64■□□□□ 0.57
ERBB2-215ENST00000583391 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.57
ERBB2-215ENST00000583391 TECPR2O15040 1411 aa18.63■□□□□ 0.57
ERBB2-215ENST00000583391 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
ERBB2-215ENST00000583391 STK26Q9P289 416 aa18.62■□□□□ 0.57
ERBB2-215ENST00000583391 DLC1Q96QB1 1528 aa18.62■□□□□ 0.57
ERBB2-215ENST00000583391 QRICH2Q9H0J4 1663 aa18.62■□□□□ 0.57
ERBB2-215ENST00000583391 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
ERBB2-215ENST00000583391 GPRASP1Q5JY77 1395 aa18.59■□□□□ 0.57
ERBB2-215ENST00000583391 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.59■□□□□ 0.57
ERBB2-215ENST00000583391 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
ERBB2-215ENST00000583391 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
ERBB2-215ENST00000583391 PROSER2Q86WR7 435 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-215ENST00000583391 RBM33Q96EV2 1170 aaKnown RBP18.57■□□□□ 0.56
ERBB2-215ENST00000583391 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
ERBB2-215ENST00000583391 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
ERBB2-215ENST00000583391 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
ERBB2-215ENST00000583391 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
ERBB2-215ENST00000583391 CARD11Q9BXL7 1154 aa18.53■□□□□ 0.56
ERBB2-215ENST00000583391 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
ERBB2-215ENST00000583391 ADGRB2O60241 1585 aa18.52■□□□□ 0.56
ERBB2-215ENST00000583391 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.56
ERBB2-215ENST00000583391 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
ERBB2-215ENST00000583391 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
ERBB2-215ENST00000583391 PRAM1Q96QH2 718 aa18.51■□□□□ 0.55
ERBB2-215ENST00000583391 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
ERBB2-215ENST00000583391 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
ERBB2-215ENST00000583391 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms