RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
PRKCA-204ENST00000583361 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
PRKCA-204ENST00000583361 HFM1A2PYH4 1435 aa11.87□□□□□ -0.51
PRKCA-204ENST00000583361 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
PRKCA-204ENST00000583361 TOM1O60784 492 aa11.87□□□□□ -0.51
PRKCA-204ENST00000583361 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
PRKCA-204ENST00000583361 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
PRKCA-204ENST00000583361 ZNF326Q5BKZ1 582 aaKnown RBP11.86□□□□□ -0.51
PRKCA-204ENST00000583361 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
PRKCA-204ENST00000583361 CLTCL1P53675 1640 aa11.85□□□□□ -0.51
PRKCA-204ENST00000583361 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRKCA-204ENST00000583361 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
PRKCA-204ENST00000583361 LRRC7Q96NW7 1537 aa11.84□□□□□ -0.51
PRKCA-204ENST00000583361 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.51
PRKCA-204ENST00000583361 ZFYVE9O95405 1425 aa11.83□□□□□ -0.52
PRKCA-204ENST00000583361 TRPM2O94759 1503 aa11.81□□□□□ -0.52
PRKCA-204ENST00000583361 PLEKHG1Q9ULL1 1385 aa11.81□□□□□ -0.52
PRKCA-204ENST00000583361 KCNA6P17658 529 aa11.8□□□□□ -0.52
PRKCA-204ENST00000583361 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
PRKCA-204ENST00000583361 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
PRKCA-204ENST00000583361 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
PRKCA-204ENST00000583361 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
PRKCA-204ENST00000583361 NKTRP30414 1462 aaKnown RBP11.77□□□□□ -0.52
PRKCA-204ENST00000583361 FOXD1Q16676 465 aa11.77□□□□□ -0.53
PRKCA-204ENST00000583361 C14orf37Q86TY3 774 aa11.77□□□□□ -0.53
PRKCA-204ENST00000583361 TMEM94Q12767 1356 aa11.77□□□□□ -0.53
PRKCA-204ENST00000583361 DISP3Q9P2K9 1392 aa11.77□□□□□ -0.53
PRKCA-204ENST00000583361 PPLO60437 1756 aa11.76□□□□□ -0.53
PRKCA-204ENST00000583361 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
PRKCA-204ENST00000583361 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
PRKCA-204ENST00000583361 HSPA1LP34931 641 aa11.75□□□□□ -0.53
PRKCA-204ENST00000583361 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
PRKCA-204ENST00000583361 MSH6P52701 1360 aa11.75□□□□□ -0.53
PRKCA-204ENST00000583361 SETD5Q9C0A6 1442 aa11.75□□□□□ -0.53
PRKCA-204ENST00000583361 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
PRKCA-204ENST00000583361 MPHOSPH9Q99550 1183 aa11.74□□□□□ -0.53
PRKCA-204ENST00000583361 ADAMTS13Q76LX8 1427 aa11.74□□□□□ -0.53
PRKCA-204ENST00000583361 CCDC144AA2RUR9 1427 aa11.73□□□□□ -0.53
PRKCA-204ENST00000583361 ROBO1Q9Y6N7 1651 aa11.73□□□□□ -0.53
PRKCA-204ENST00000583361 SETBP1Q9Y6X0 1596 aa11.72□□□□□ -0.53
PRKCA-204ENST00000583361 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
PRKCA-204ENST00000583361 PIK3R4Q99570 1358 aa11.71□□□□□ -0.53
PRKCA-204ENST00000583361 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
PRKCA-204ENST00000583361 ACIN1Q9UKV3 1341 aaKnown RBP11.71□□□□□ -0.53
PRKCA-204ENST00000583361 RGL3Q3MIN7 710 aa11.71□□□□□ -0.53
PRKCA-204ENST00000583361 AMOTL2Q9Y2J4 779 aa11.71□□□□□ -0.53
PRKCA-204ENST00000583361 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
PRKCA-204ENST00000583361 PHLPP1O60346 1717 aa11.69□□□□□ -0.54
PRKCA-204ENST00000583361 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
PRKCA-204ENST00000583361 IFT172Q9UG01 1749 aa11.69□□□□□ -0.54
PRKCA-204ENST00000583361 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
PRKCA-204ENST00000583361 SETD1AO15047 1707 aaKnown RBP11.68□□□□□ -0.54
PRKCA-204ENST00000583361 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
PRKCA-204ENST00000583361 RPGRIP1LQ68CZ1 1315 aa11.67□□□□□ -0.54
PRKCA-204ENST00000583361 ATF3P18847 181 aa11.67□□□□□ -0.54
PRKCA-204ENST00000583361 METP08581 1390 aa11.67□□□□□ -0.54
PRKCA-204ENST00000583361 PHF23Q9BUL5 403 aaPredicted RBP11.66□□□□□ -0.54
PRKCA-204ENST00000583361 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
PRKCA-204ENST00000583361 SLAIN2Q9P270 581 aa11.65□□□□□ -0.54
PRKCA-204ENST00000583361 FAM135BQ49AJ0 1406 aa11.65□□□□□ -0.54
PRKCA-204ENST00000583361 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
PRKCA-204ENST00000583361 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
PRKCA-204ENST00000583361 C19orf44Q9H6X5 657 aa11.64□□□□□ -0.55
PRKCA-204ENST00000583361 ANKRD30BQ9BXX2 1392 aa11.62□□□□□ -0.55
PRKCA-204ENST00000583361 ADGRF5Q8IZF2 1346 aa11.61□□□□□ -0.55
PRKCA-204ENST00000583361 SPATA31E1Q6ZUB1 1445 aa11.61□□□□□ -0.55
PRKCA-204ENST00000583361 ILDR2Q71H61 639 aa11.6□□□□□ -0.55
PRKCA-204ENST00000583361 STK26Q9P289 416 aa11.6□□□□□ -0.55
PRKCA-204ENST00000583361 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
PRKCA-204ENST00000583361 LAMC1P11047 1609 aa11.59□□□□□ -0.55
PRKCA-204ENST00000583361 DCCP43146 1447 aa11.59□□□□□ -0.55
PRKCA-204ENST00000583361 KNDC1Q76NI1 1749 aa11.58□□□□□ -0.56
PRKCA-204ENST00000583361 PTCH1Q13635 1447 aa11.58□□□□□ -0.56
PRKCA-204ENST00000583361 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
PRKCA-204ENST00000583361 ROBO2Q9HCK4 1378 aa11.57□□□□□ -0.56
PRKCA-204ENST00000583361 TMEM132EQ6IEE7 984 aa11.57□□□□□ -0.56
PRKCA-204ENST00000583361 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
PRKCA-204ENST00000583361 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
PRKCA-204ENST00000583361 HRCP23327 699 aa11.56□□□□□ -0.56
PRKCA-204ENST00000583361 MST1RQ04912 1400 aa11.56□□□□□ -0.56
PRKCA-204ENST00000583361 NHSL1Q5SYE7 1610 aa11.56□□□□□ -0.56
PRKCA-204ENST00000583361 AHDC1Q5TGY3 1603 aaPredicted RBP11.56□□□□□ -0.56
PRKCA-204ENST00000583361 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
PRKCA-204ENST00000583361 JCADQ9P266 1359 aa11.55□□□□□ -0.56
PRKCA-204ENST00000583361 BRINP3Q76B58 766 aa11.55□□□□□ -0.56
PRKCA-204ENST00000583361 MYOM2P54296 1465 aa11.55□□□□□ -0.56
PRKCA-204ENST00000583361 MEX3CQ5U5Q3 659 aaKnown RBP11.54□□□□□ -0.56
PRKCA-204ENST00000583361 DCAF11Q8TEB1 546 aa11.54□□□□□ -0.56
PRKCA-204ENST00000583361 SHPRHQ149N8 1683 aa11.54□□□□□ -0.56
PRKCA-204ENST00000583361 YTHDC2Q9H6S0 1430 aaKnown RBP11.53□□□□□ -0.56
PRKCA-204ENST00000583361 CFAP70Q5T0N1 1121 aa11.53□□□□□ -0.56
PRKCA-204ENST00000583361 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
PRKCA-204ENST00000583361 RGPD8O14715 1765 aaPredicted RBP11.53□□□□□ -0.56
PRKCA-204ENST00000583361 LRPPRCP42704 1394 aaKnown RBP11.53□□□□□ -0.56
PRKCA-204ENST00000583361 DHX57Q6P158 1386 aaKnown RBP11.53□□□□□ -0.56
PRKCA-204ENST00000583361 NUTM2FA1L443 756 aa11.52□□□□□ -0.57
PRKCA-204ENST00000583361 CDC42BPGQ6DT37 1551 aa11.52□□□□□ -0.57
PRKCA-204ENST00000583361 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
PRKCA-204ENST00000583361 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
PRKCA-204ENST00000583361 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms