RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 CHGAP10645 457 aaKnown RBP18.59■□□□□ 0.57
SMARCD2-209ENST00000581832 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
SMARCD2-209ENST00000581832 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
SMARCD2-209ENST00000581832 SETD5Q9C0A6 1442 aa18.57■□□□□ 0.56
SMARCD2-209ENST00000581832 HDGFP51858 240 aaKnown RBP18.57■□□□□ 0.56
SMARCD2-209ENST00000581832 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMARCD2-209ENST00000581832 XIRP1Q702N8 1843 aaKnown RBP18.57■□□□□ 0.56
SMARCD2-209ENST00000581832 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
SMARCD2-209ENST00000581832 NUTM2DQ5VT03 806 aaPredicted RBP18.55■□□□□ 0.56
SMARCD2-209ENST00000581832 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
SMARCD2-209ENST00000581832 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
SMARCD2-209ENST00000581832 KCNA6P17658 529 aa18.54■□□□□ 0.56
SMARCD2-209ENST00000581832 FOXD1Q16676 465 aa18.54■□□□□ 0.56
SMARCD2-209ENST00000581832 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
SMARCD2-209ENST00000581832 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
SMARCD2-209ENST00000581832 KIF1BO60333 1816 aa18.53■□□□□ 0.56
SMARCD2-209ENST00000581832 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
SMARCD2-209ENST00000581832 NWD1Q149M9 1564 aa18.52■□□□□ 0.56
SMARCD2-209ENST00000581832 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
SMARCD2-209ENST00000581832 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
SMARCD2-209ENST00000581832 RAB3GAP2Q9H2M9 1393 aa18.51■□□□□ 0.55
SMARCD2-209ENST00000581832 NEXMIFQ5QGS0 1516 aa18.5■□□□□ 0.55
SMARCD2-209ENST00000581832 NRXN3Q9Y4C0 1643 aa18.5■□□□□ 0.55
SMARCD2-209ENST00000581832 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
SMARCD2-209ENST00000581832 TOM1O60784 492 aa18.48■□□□□ 0.55
SMARCD2-209ENST00000581832 BCANQ96GW7 911 aa18.48■□□□□ 0.55
SMARCD2-209ENST00000581832 DIP2AQ14689 1571 aa18.47■□□□□ 0.55
SMARCD2-209ENST00000581832 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
SMARCD2-209ENST00000581832 SETBP1Q9Y6X0 1596 aa18.47■□□□□ 0.55
SMARCD2-209ENST00000581832 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
SMARCD2-209ENST00000581832 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
SMARCD2-209ENST00000581832 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
SMARCD2-209ENST00000581832 HRCP23327 699 aa18.45■□□□□ 0.54
SMARCD2-209ENST00000581832 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
SMARCD2-209ENST00000581832 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
SMARCD2-209ENST00000581832 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
SMARCD2-209ENST00000581832 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
SMARCD2-209ENST00000581832 PPLO60437 1756 aa18.42■□□□□ 0.54
SMARCD2-209ENST00000581832 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
SMARCD2-209ENST00000581832 CCDC144AA2RUR9 1427 aa18.41■□□□□ 0.54
SMARCD2-209ENST00000581832 PIP4K2BP78356 416 aa18.41■□□□□ 0.54
SMARCD2-209ENST00000581832 METP08581 1390 aa18.4■□□□□ 0.54
SMARCD2-209ENST00000581832 SETD1AO15047 1707 aaKnown RBP18.39■□□□□ 0.53
SMARCD2-209ENST00000581832 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
SMARCD2-209ENST00000581832 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
SMARCD2-209ENST00000581832 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
SMARCD2-209ENST00000581832 HSPA1LP34931 641 aa18.37■□□□□ 0.53
SMARCD2-209ENST00000581832 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
SMARCD2-209ENST00000581832 ANKRD30BQ9BXX2 1392 aa18.36■□□□□ 0.53
SMARCD2-209ENST00000581832 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
SMARCD2-209ENST00000581832 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
SMARCD2-209ENST00000581832 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
SMARCD2-209ENST00000581832 ADGRF5Q8IZF2 1346 aa18.33■□□□□ 0.53
SMARCD2-209ENST00000581832 FAM135BQ49AJ0 1406 aa18.32■□□□□ 0.52
SMARCD2-209ENST00000581832 MSH6P52701 1360 aa18.31■□□□□ 0.52
SMARCD2-209ENST00000581832 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
SMARCD2-209ENST00000581832 PRAG1Q86YV5 1406 aa18.29■□□□□ 0.52
SMARCD2-209ENST00000581832 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
SMARCD2-209ENST00000581832 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
SMARCD2-209ENST00000581832 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.52
SMARCD2-209ENST00000581832 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
SMARCD2-209ENST00000581832 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
SMARCD2-209ENST00000581832 PTCH1Q13635 1447 aa18.24■□□□□ 0.51
SMARCD2-209ENST00000581832 ROBO2Q9HCK4 1378 aa18.24■□□□□ 0.51
SMARCD2-209ENST00000581832 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
SMARCD2-209ENST00000581832 MYOM2P54296 1465 aa18.23■□□□□ 0.51
SMARCD2-209ENST00000581832 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
SMARCD2-209ENST00000581832 DCCP43146 1447 aa18.23■□□□□ 0.51
SMARCD2-209ENST00000581832 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
SMARCD2-209ENST00000581832 C14orf37Q86TY3 774 aa18.21■□□□□ 0.51
SMARCD2-209ENST00000581832 C14orf93Q9H972 538 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-209ENST00000581832 ADGRL3Q9HAR2 1447 aa18.21■□□□□ 0.51
SMARCD2-209ENST00000581832 TECPR2O15040 1411 aa18.2■□□□□ 0.5
SMARCD2-209ENST00000581832 ATF3P18847 181 aa18.19■□□□□ 0.5
SMARCD2-209ENST00000581832 DHX57Q6P158 1386 aaKnown RBP18.18■□□□□ 0.5
SMARCD2-209ENST00000581832 MST1RQ04912 1400 aa18.18■□□□□ 0.5
SMARCD2-209ENST00000581832 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
SMARCD2-209ENST00000581832 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
SMARCD2-209ENST00000581832 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
SMARCD2-209ENST00000581832 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
SMARCD2-209ENST00000581832 KNDC1Q76NI1 1749 aa18.16■□□□□ 0.5
SMARCD2-209ENST00000581832 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
SMARCD2-209ENST00000581832 BRINP3Q76B58 766 aa18.15■□□□□ 0.5
SMARCD2-209ENST00000581832 MED1Q15648 1581 aaPredicted RBP18.15■□□□□ 0.5
SMARCD2-209ENST00000581832 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
SMARCD2-209ENST00000581832 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
SMARCD2-209ENST00000581832 PHLPP1O60346 1717 aa18.14■□□□□ 0.49
SMARCD2-209ENST00000581832 LAMC1P11047 1609 aa18.13■□□□□ 0.49
SMARCD2-209ENST00000581832 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
SMARCD2-209ENST00000581832 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
SMARCD2-209ENST00000581832 STAC3Q96MF2 364 aa18.13■□□□□ 0.49
SMARCD2-209ENST00000581832 STK26Q9P289 416 aa18.13■□□□□ 0.49
SMARCD2-209ENST00000581832 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
SMARCD2-209ENST00000581832 SIRT1Q96EB6 747 aa18.12■□□□□ 0.49
SMARCD2-209ENST00000581832 ADGRB1O14514 1584 aa18.12■□□□□ 0.49
SMARCD2-209ENST00000581832 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
SMARCD2-209ENST00000581832 PLEKHH1Q9ULM0 1364 aa18.11■□□□□ 0.49
SMARCD2-209ENST00000581832 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
SMARCD2-209ENST00000581832 ILDR2Q71H61 639 aa18.1■□□□□ 0.49
SMARCD2-209ENST00000581832 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms