RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 LTKP29376 864 aa13.62□□□□□ -0.23
NUP85-217ENST00000581335 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
NUP85-217ENST00000581335 SLIT1O75093 1534 aa13.62□□□□□ -0.23
NUP85-217ENST00000581335 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
NUP85-217ENST00000581335 PIK3C2BO00750 1634 aa13.61□□□□□ -0.23
NUP85-217ENST00000581335 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
NUP85-217ENST00000581335 HSPA1LP34931 641 aa13.61□□□□□ -0.23
NUP85-217ENST00000581335 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
NUP85-217ENST00000581335 EID1Q9Y6B2 187 aa13.6□□□□□ -0.23
NUP85-217ENST00000581335 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
NUP85-217ENST00000581335 SYNMO15061 1565 aa13.59□□□□□ -0.23
NUP85-217ENST00000581335 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
NUP85-217ENST00000581335 ADGRL2O95490 1459 aa13.59□□□□□ -0.23
NUP85-217ENST00000581335 IDI1Q13907 227 aa13.58□□□□□ -0.24
NUP85-217ENST00000581335 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
NUP85-217ENST00000581335 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
NUP85-217ENST00000581335 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
NUP85-217ENST00000581335 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
NUP85-217ENST00000581335 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
NUP85-217ENST00000581335 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
NUP85-217ENST00000581335 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
NUP85-217ENST00000581335 NOS1P29475 1434 aa13.55□□□□□ -0.24
NUP85-217ENST00000581335 POLA2Q14181 598 aa13.54□□□□□ -0.24
NUP85-217ENST00000581335 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
NUP85-217ENST00000581335 SLC52A1Q9NWF4 448 aa13.53□□□□□ -0.24
NUP85-217ENST00000581335 MED1Q15648 1581 aaPredicted RBP13.53□□□□□ -0.24
NUP85-217ENST00000581335 RPRD2Q5VT52 1461 aaKnown RBP13.52□□□□□ -0.25
NUP85-217ENST00000581335 TET3O43151 1660 aa13.52□□□□□ -0.25
NUP85-217ENST00000581335 ADGRB3O60242 1522 aa13.51□□□□□ -0.25
NUP85-217ENST00000581335 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
NUP85-217ENST00000581335 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
NUP85-217ENST00000581335 KCNA6P17658 529 aa13.49□□□□□ -0.25
NUP85-217ENST00000581335 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
NUP85-217ENST00000581335 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
NUP85-217ENST00000581335 UNC13BO14795 1591 aa13.48□□□□□ -0.25
NUP85-217ENST00000581335 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
NUP85-217ENST00000581335 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
NUP85-217ENST00000581335 BCANQ96GW7 911 aa13.46□□□□□ -0.25
NUP85-217ENST00000581335 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.26
NUP85-217ENST00000581335 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
NUP85-217ENST00000581335 E9PCH4 1651 aa13.45□□□□□ -0.26
NUP85-217ENST00000581335 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
NUP85-217ENST00000581335 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
NUP85-217ENST00000581335 NWD1Q149M9 1564 aa13.44□□□□□ -0.26
NUP85-217ENST00000581335 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
NUP85-217ENST00000581335 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
NUP85-217ENST00000581335 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
NUP85-217ENST00000581335 RIMS2Q9UQ26 1411 aa13.43□□□□□ -0.26
NUP85-217ENST00000581335 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
NUP85-217ENST00000581335 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
NUP85-217ENST00000581335 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
NUP85-217ENST00000581335 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
NUP85-217ENST00000581335 CAPN15O75808 1086 aa13.41□□□□□ -0.26
NUP85-217ENST00000581335 CHGAP10645 457 aaKnown RBP13.41□□□□□ -0.26
NUP85-217ENST00000581335 ITGAEP38570 1179 aa13.41□□□□□ -0.26
NUP85-217ENST00000581335 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.41□□□□□ -0.26
NUP85-217ENST00000581335 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
NUP85-217ENST00000581335 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
NUP85-217ENST00000581335 NUP155O75694 1391 aa13.4□□□□□ -0.26
NUP85-217ENST00000581335 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
NUP85-217ENST00000581335 MSH6P52701 1360 aa13.38□□□□□ -0.27
NUP85-217ENST00000581335 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
NUP85-217ENST00000581335 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
NUP85-217ENST00000581335 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
NUP85-217ENST00000581335 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
NUP85-217ENST00000581335 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
NUP85-217ENST00000581335 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
NUP85-217ENST00000581335 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
NUP85-217ENST00000581335 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
NUP85-217ENST00000581335 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
NUP85-217ENST00000581335 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
NUP85-217ENST00000581335 PHLPP1O60346 1717 aa13.33□□□□□ -0.27
NUP85-217ENST00000581335 TRPM2O94759 1503 aa13.32□□□□□ -0.28
NUP85-217ENST00000581335 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
NUP85-217ENST00000581335 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
NUP85-217ENST00000581335 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
NUP85-217ENST00000581335 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
NUP85-217ENST00000581335 AMOTL2Q9Y2J4 779 aa13.3□□□□□ -0.28
NUP85-217ENST00000581335 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
NUP85-217ENST00000581335 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
NUP85-217ENST00000581335 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
NUP85-217ENST00000581335 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
NUP85-217ENST00000581335 ATF3P18847 181 aa13.28□□□□□ -0.28
NUP85-217ENST00000581335 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
NUP85-217ENST00000581335 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
NUP85-217ENST00000581335 ABCB7O75027 752 aa13.27□□□□□ -0.29
NUP85-217ENST00000581335 JCADQ9P266 1359 aa13.27□□□□□ -0.29
NUP85-217ENST00000581335 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
NUP85-217ENST00000581335 KIF1BO60333 1816 aa13.27□□□□□ -0.29
NUP85-217ENST00000581335 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
NUP85-217ENST00000581335 NAIPQ13075 1403 aa13.26□□□□□ -0.29
NUP85-217ENST00000581335 POTEAQ6S8J7 498 aa13.26□□□□□ -0.29
NUP85-217ENST00000581335 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
NUP85-217ENST00000581335 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
NUP85-217ENST00000581335 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
NUP85-217ENST00000581335 METP08581 1390 aa13.23□□□□□ -0.29
NUP85-217ENST00000581335 DCCP43146 1447 aa13.22□□□□□ -0.29
NUP85-217ENST00000581335 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
NUP85-217ENST00000581335 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
NUP85-217ENST00000581335 SHPRHQ149N8 1683 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms