RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 KCNA6P17658 529 aa18.11■□□□□ 0.49
CCDC84-209ENST00000580556 HRCP23327 699 aa18.11■□□□□ 0.49
CCDC84-209ENST00000580556 RAB3GAP2Q9H2M9 1393 aa18.1■□□□□ 0.49
CCDC84-209ENST00000580556 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
CCDC84-209ENST00000580556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.483e-7■■■■□ 25.9
CCDC84-209ENST00000580556 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
CCDC84-209ENST00000580556 PHLPP1O60346 1717 aa18.08■□□□□ 0.48
CCDC84-209ENST00000580556 TET3O43151 1660 aa18.08■□□□□ 0.48
CCDC84-209ENST00000580556 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
CCDC84-209ENST00000580556 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
CCDC84-209ENST00000580556 IDI1Q13907 227 aa18.06■□□□□ 0.48
CCDC84-209ENST00000580556 LMTK2Q8IWU2 1503 aa18.06■□□□□ 0.48
CCDC84-209ENST00000580556 KANK1Q14678 1352 aa18.05■□□□□ 0.48
CCDC84-209ENST00000580556 EFCAB6Q5THR3 1501 aa18.05■□□□□ 0.48
CCDC84-209ENST00000580556 UPF1Q92900 1129 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC84-209ENST00000580556 SLAIN2Q9P270 581 aa18.04■□□□□ 0.48
CCDC84-209ENST00000580556 LRP6O75581 1613 aa18.04■□□□□ 0.48
CCDC84-209ENST00000580556 JCADQ9P266 1359 aa18.04■□□□□ 0.48
CCDC84-209ENST00000580556 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
CCDC84-209ENST00000580556 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
CCDC84-209ENST00000580556 NUP155O75694 1391 aa18.02■□□□□ 0.47
CCDC84-209ENST00000580556 MSH6P52701 1360 aa18.02■□□□□ 0.47
CCDC84-209ENST00000580556 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
CCDC84-209ENST00000580556 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
CCDC84-209ENST00000580556 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
CCDC84-209ENST00000580556 BCANQ96GW7 911 aa17.99■□□□□ 0.47
CCDC84-209ENST00000580556 RPRD2Q5VT52 1461 aaKnown RBP17.96■□□□□ 0.47
CCDC84-209ENST00000580556 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.47
CCDC84-209ENST00000580556 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
CCDC84-209ENST00000580556 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
CCDC84-209ENST00000580556 NOS1P29475 1434 aa17.94■□□□□ 0.46
CCDC84-209ENST00000580556 ZNF772Q68DY9 489 aaPredicted RBP17.93■□□□□ 0.46
CCDC84-209ENST00000580556 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
CCDC84-209ENST00000580556 MYO5BQ9ULV0 1848 aa17.93■□□□□ 0.46
CCDC84-209ENST00000580556 E9PCH4 1651 aa17.91■□□□□ 0.46
CCDC84-209ENST00000580556 ZFYVE9O95405 1425 aa17.9■□□□□ 0.46
CCDC84-209ENST00000580556 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
CCDC84-209ENST00000580556 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
CCDC84-209ENST00000580556 RXRBP28702 533 aa17.89■□□□□ 0.45
CCDC84-209ENST00000580556 SHPRHQ149N8 1683 aa17.89■□□□□ 0.45
CCDC84-209ENST00000580556 PLEKHG1Q9ULL1 1385 aa17.89■□□□□ 0.45
CCDC84-209ENST00000580556 NUTM2BA6NNL0 878 aaPredicted RBP17.88■□□□□ 0.45
CCDC84-209ENST00000580556 NUTM2EB1AL46 878 aaPredicted RBP17.88■□□□□ 0.45
CCDC84-209ENST00000580556 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
CCDC84-209ENST00000580556 NUTM2AQ8IVF1 878 aaPredicted RBP17.88■□□□□ 0.45
CCDC84-209ENST00000580556 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
CCDC84-209ENST00000580556 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.87■□□□□ 0.45
CCDC84-209ENST00000580556 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
CCDC84-209ENST00000580556 RIMS2Q9UQ26 1411 aa17.87■□□□□ 0.45
CCDC84-209ENST00000580556 NUTM2DQ5VT03 806 aaPredicted RBP17.86■□□□□ 0.45
CCDC84-209ENST00000580556 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
CCDC84-209ENST00000580556 DHX57Q6P158 1386 aaKnown RBP17.85■□□□□ 0.45
CCDC84-209ENST00000580556 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
CCDC84-209ENST00000580556 TRPM2O94759 1503 aa17.84■□□□□ 0.45
CCDC84-209ENST00000580556 TBX22Q9Y458 520 aa17.84■□□□□ 0.45
CCDC84-209ENST00000580556 AFF2P51816 1311 aa17.83■□□□□ 0.44
CCDC84-209ENST00000580556 SPHKAPQ2M3C7 1700 aa17.83■□□□□ 0.44
CCDC84-209ENST00000580556 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.44
CCDC84-209ENST00000580556 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
CCDC84-209ENST00000580556 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
CCDC84-209ENST00000580556 ATF3P18847 181 aa17.82■□□□□ 0.44
CCDC84-209ENST00000580556 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
CCDC84-209ENST00000580556 CADPS2Q86UW7 1296 aa17.82■□□□□ 0.44
CCDC84-209ENST00000580556 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
CCDC84-209ENST00000580556 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
CCDC84-209ENST00000580556 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
CCDC84-209ENST00000580556 RGS12O14924 1447 aa17.8■□□□□ 0.44
CCDC84-209ENST00000580556 CHGAP10645 457 aaKnown RBP17.79■□□□□ 0.44
CCDC84-209ENST00000580556 ANKRD30BQ9BXX2 1392 aa17.79■□□□□ 0.44
CCDC84-209ENST00000580556 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
CCDC84-209ENST00000580556 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
CCDC84-209ENST00000580556 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
CCDC84-209ENST00000580556 AMOTL2Q9Y2J4 779 aa17.76■□□□□ 0.43
CCDC84-209ENST00000580556 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
CCDC84-209ENST00000580556 FOXD1Q16676 465 aa17.75■□□□□ 0.43
CCDC84-209ENST00000580556 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
CCDC84-209ENST00000580556 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
CCDC84-209ENST00000580556 ASXL1Q8IXJ9 1541 aa17.75■□□□□ 0.43
CCDC84-209ENST00000580556 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
CCDC84-209ENST00000580556 CLTCL1P53675 1640 aa17.73■□□□□ 0.43
CCDC84-209ENST00000580556 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCDC84-209ENST00000580556 NHSL1Q5SYE7 1610 aa17.72■□□□□ 0.43
CCDC84-209ENST00000580556 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
CCDC84-209ENST00000580556 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
CCDC84-209ENST00000580556 MST1RQ04912 1400 aa17.71■□□□□ 0.43
CCDC84-209ENST00000580556 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
CCDC84-209ENST00000580556 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
CCDC84-209ENST00000580556 LRRC59Q96AG4 307 aaKnown RBP17.68■□□□□ 0.42
CCDC84-209ENST00000580556 DCCP43146 1447 aa17.67■□□□□ 0.42
CCDC84-209ENST00000580556 XRN1Q8IZH2 1706 aaKnown RBP17.67■□□□□ 0.42
CCDC84-209ENST00000580556 NRXN3Q9Y4C0 1643 aa17.66■□□□□ 0.42
CCDC84-209ENST00000580556 KIF1BO60333 1816 aa17.65■□□□□ 0.42
CCDC84-209ENST00000580556 SPATA31E1Q6ZUB1 1445 aa17.65■□□□□ 0.42
CCDC84-209ENST00000580556 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
CCDC84-209ENST00000580556 NGLY1Q96IV0 654 aa17.65■□□□□ 0.42
CCDC84-209ENST00000580556 SETBP1Q9Y6X0 1596 aa17.64■□□□□ 0.41
CCDC84-209ENST00000580556 METP08581 1390 aa17.63■□□□□ 0.41
CCDC84-209ENST00000580556 ATAD2Q6PL18 1390 aa17.62■□□□□ 0.41
CCDC84-209ENST00000580556 USP21Q9UK80 565 aa17.6■□□□□ 0.41
CCDC84-209ENST00000580556 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms