RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 BCANQ96GW7 911 aa16.28■□□□□ 0.2
NDEL1-208ENST00000580237 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
NDEL1-208ENST00000580237 ZFYVE9O95405 1425 aa16.27■□□□□ 0.19
NDEL1-208ENST00000580237 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
NDEL1-208ENST00000580237 SETD5Q9C0A6 1442 aa16.25■□□□□ 0.19
NDEL1-208ENST00000580237 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
NDEL1-208ENST00000580237 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
NDEL1-208ENST00000580237 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
NDEL1-208ENST00000580237 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.22■□□□□ 0.19
NDEL1-208ENST00000580237 DIP2AQ14689 1571 aa16.21■□□□□ 0.19
NDEL1-208ENST00000580237 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
NDEL1-208ENST00000580237 UBAP1LF5GYI3 381 aa16.2■□□□□ 0.18
NDEL1-208ENST00000580237 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
NDEL1-208ENST00000580237 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
NDEL1-208ENST00000580237 RAB3GAP2Q9H2M9 1393 aa16.2■□□□□ 0.18
NDEL1-208ENST00000580237 NWD1Q149M9 1564 aa16.2■□□□□ 0.18
NDEL1-208ENST00000580237 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
NDEL1-208ENST00000580237 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
NDEL1-208ENST00000580237 CHD2O14647 1828 aaKnown RBP16.19■□□□□ 0.18
NDEL1-208ENST00000580237 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
NDEL1-208ENST00000580237 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
NDEL1-208ENST00000580237 NKTRP30414 1462 aaKnown RBP16.17■□□□□ 0.18
NDEL1-208ENST00000580237 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
NDEL1-208ENST00000580237 PPLO60437 1756 aa16.16■□□□□ 0.18
NDEL1-208ENST00000580237 FOXD1Q16676 465 aa16.16■□□□□ 0.18
NDEL1-208ENST00000580237 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
NDEL1-208ENST00000580237 NRXN3Q9Y4C0 1643 aa16.15■□□□□ 0.18
NDEL1-208ENST00000580237 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
NDEL1-208ENST00000580237 TOM1O60784 492 aa16.13■□□□□ 0.17
NDEL1-208ENST00000580237 KCNA6P17658 529 aa16.13■□□□□ 0.17
NDEL1-208ENST00000580237 ADAMTS13Q76LX8 1427 aa16.12■□□□□ 0.17
NDEL1-208ENST00000580237 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
NDEL1-208ENST00000580237 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
NDEL1-208ENST00000580237 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
NDEL1-208ENST00000580237 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
NDEL1-208ENST00000580237 TBX22Q9Y458 520 aa16.09■□□□□ 0.17
NDEL1-208ENST00000580237 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
NDEL1-208ENST00000580237 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.17
NDEL1-208ENST00000580237 ALKQ9UM73 1620 aa16.07■□□□□ 0.16
NDEL1-208ENST00000580237 SETD1AO15047 1707 aaKnown RBP16.07■□□□□ 0.16
NDEL1-208ENST00000580237 MSH6P52701 1360 aa16.06■□□□□ 0.16
NDEL1-208ENST00000580237 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
NDEL1-208ENST00000580237 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
NDEL1-208ENST00000580237 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-208ENST00000580237 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
NDEL1-208ENST00000580237 RGL3Q3MIN7 710 aa16.04■□□□□ 0.16
NDEL1-208ENST00000580237 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
NDEL1-208ENST00000580237 PTPRUQ92729 1446 aa16.02■□□□□ 0.15
NDEL1-208ENST00000580237 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
NDEL1-208ENST00000580237 AMOTL2Q9Y2J4 779 aa16.01■□□□□ 0.15
NDEL1-208ENST00000580237 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.01■□□□□ 0.15
NDEL1-208ENST00000580237 ROBO1Q9Y6N7 1651 aa16.01■□□□□ 0.15
NDEL1-208ENST00000580237 METP08581 1390 aa16■□□□□ 0.15
NDEL1-208ENST00000580237 HRCP23327 699 aa16■□□□□ 0.15
NDEL1-208ENST00000580237 LAMC1P11047 1609 aa16■□□□□ 0.15
NDEL1-208ENST00000580237 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
NDEL1-208ENST00000580237 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
NDEL1-208ENST00000580237 HSPA1LP34931 641 aa15.97■□□□□ 0.15
NDEL1-208ENST00000580237 MYOM2P54296 1465 aa15.97■□□□□ 0.15
NDEL1-208ENST00000580237 ADGRF5Q8IZF2 1346 aa15.95■□□□□ 0.14
NDEL1-208ENST00000580237 PIK3C2GO75747 1445 aa15.95■□□□□ 0.14
NDEL1-208ENST00000580237 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
NDEL1-208ENST00000580237 KNDC1Q76NI1 1749 aa15.95■□□□□ 0.14
NDEL1-208ENST00000580237 ATF3P18847 181 aa15.94■□□□□ 0.14
NDEL1-208ENST00000580237 PHLPP1O60346 1717 aa15.94■□□□□ 0.14
NDEL1-208ENST00000580237 DCCP43146 1447 aa15.93■□□□□ 0.14
NDEL1-208ENST00000580237 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
NDEL1-208ENST00000580237 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
NDEL1-208ENST00000580237 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
NDEL1-208ENST00000580237 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
NDEL1-208ENST00000580237 C19orf44Q9H6X5 657 aa15.91■□□□□ 0.14
NDEL1-208ENST00000580237 DISP3Q9P2K9 1392 aa15.9■□□□□ 0.14
NDEL1-208ENST00000580237 PRAG1Q86YV5 1406 aa15.9■□□□□ 0.14
NDEL1-208ENST00000580237 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
NDEL1-208ENST00000580237 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
NDEL1-208ENST00000580237 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
NDEL1-208ENST00000580237 ROBO2Q9HCK4 1378 aa15.88■□□□□ 0.13
NDEL1-208ENST00000580237 STK26Q9P289 416 aa15.87■□□□□ 0.13
NDEL1-208ENST00000580237 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
NDEL1-208ENST00000580237 LRPPRCP42704 1394 aaKnown RBP15.86■□□□□ 0.13
NDEL1-208ENST00000580237 TECPR2O15040 1411 aa15.85■□□□□ 0.13
NDEL1-208ENST00000580237 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
NDEL1-208ENST00000580237 TRIM26Q12899 539 aaPredicted RBP15.85■□□□□ 0.13
NDEL1-208ENST00000580237 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
NDEL1-208ENST00000580237 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
NDEL1-208ENST00000580237 MST1RQ04912 1400 aa15.85■□□□□ 0.13
NDEL1-208ENST00000580237 COL16A1Q07092 1604 aaPredicted RBP15.84■□□□□ 0.13
NDEL1-208ENST00000580237 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
NDEL1-208ENST00000580237 TMEM132EQ6IEE7 984 aa15.84■□□□□ 0.13
NDEL1-208ENST00000580237 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
NDEL1-208ENST00000580237 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.12
NDEL1-208ENST00000580237 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
NDEL1-208ENST00000580237 C14orf93Q9H972 538 aaKnown RBP15.82■□□□□ 0.12
NDEL1-208ENST00000580237 ABCC11Q96J66 1382 aa15.81■□□□□ 0.12
NDEL1-208ENST00000580237 KIAA1210Q9ULL0 1709 aa15.8■□□□□ 0.12
NDEL1-208ENST00000580237 ADGRB1O14514 1584 aa15.8■□□□□ 0.12
NDEL1-208ENST00000580237 FMN2Q9NZ56 1722 aa15.8■□□□□ 0.12
NDEL1-208ENST00000580237 BRINP3Q76B58 766 aa15.79■□□□□ 0.12
NDEL1-208ENST00000580237 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
NDEL1-208ENST00000580237 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms