RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 KDM5AP29375 1690 aaKnown RBP25.66■■□□□ 1.7
TMEM220-203ENST00000578345 TOM1O60784 492 aa25.64■■□□□ 1.7
TMEM220-203ENST00000578345 HSPA1LP34931 641 aa25.64■■□□□ 1.7
TMEM220-203ENST00000578345 EID1Q9Y6B2 187 aa25.64■■□□□ 1.7
TMEM220-203ENST00000578345 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
TMEM220-203ENST00000578345 HDGFP51858 240 aaKnown RBP25.63■■□□□ 1.69
TMEM220-203ENST00000578345 TXNDC2Q86VQ3 553 aa25.63■■□□□ 1.69
TMEM220-203ENST00000578345 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
TMEM220-203ENST00000578345 SPHKAPQ2M3C7 1700 aa25.61■■□□□ 1.69
TMEM220-203ENST00000578345 XIRP1Q702N8 1843 aaKnown RBP25.6■■□□□ 1.69
TMEM220-203ENST00000578345 ADGRB3O60242 1522 aa25.59■■□□□ 1.69
TMEM220-203ENST00000578345 FOXD1Q16676 465 aa25.58■■□□□ 1.69
TMEM220-203ENST00000578345 TRPM2O94759 1503 aa25.55■■□□□ 1.68
TMEM220-203ENST00000578345 MED1Q15648 1581 aaPredicted RBP25.54■■□□□ 1.68
TMEM220-203ENST00000578345 SOCS7O14512 581 aa25.53■■□□□ 1.68
TMEM220-203ENST00000578345 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.53■■□□□ 1.68
TMEM220-203ENST00000578345 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
TMEM220-203ENST00000578345 ZNF326Q5BKZ1 582 aaKnown RBP25.52■■□□□ 1.68
TMEM220-203ENST00000578345 TMEM131LA2VDJ0 1609 aa25.51■■□□□ 1.67
TMEM220-203ENST00000578345 CCDC144AA2RUR9 1427 aa25.5■■□□□ 1.67
TMEM220-203ENST00000578345 PPP1R15AO75807 674 aaPredicted RBP25.5■■□□□ 1.67
TMEM220-203ENST00000578345 BCANQ96GW7 911 aa25.48■■□□□ 1.67
TMEM220-203ENST00000578345 CLTCL1P53675 1640 aa25.47■■□□□ 1.67
TMEM220-203ENST00000578345 KIF1BO60333 1816 aa25.47■■□□□ 1.67
TMEM220-203ENST00000578345 ZFYVE9O95405 1425 aa25.46■■□□□ 1.67
TMEM220-203ENST00000578345 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
TMEM220-203ENST00000578345 SLC26A8Q96RN1 970 aa25.45■■□□□ 1.66
TMEM220-203ENST00000578345 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
TMEM220-203ENST00000578345 TMEM94Q12767 1356 aa25.42■■□□□ 1.66
TMEM220-203ENST00000578345 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
TMEM220-203ENST00000578345 RPGRIP1LQ68CZ1 1315 aa25.4■■□□□ 1.66
TMEM220-203ENST00000578345 KCNA6P17658 529 aa25.4■■□□□ 1.66
TMEM220-203ENST00000578345 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.66
TMEM220-203ENST00000578345 ANKRD30BQ9BXX2 1392 aa25.38■■□□□ 1.65
TMEM220-203ENST00000578345 NKTRP30414 1462 aaKnown RBP25.37■■□□□ 1.65
TMEM220-203ENST00000578345 PLEKHG1Q9ULL1 1385 aa25.37■■□□□ 1.65
TMEM220-203ENST00000578345 VGFO15240 615 aaPredicted RBP25.37■■□□□ 1.65
TMEM220-203ENST00000578345 RGL3Q3MIN7 710 aa25.36■■□□□ 1.65
TMEM220-203ENST00000578345 RBM33Q96EV2 1170 aaKnown RBP25.36■■□□□ 1.65
TMEM220-203ENST00000578345 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
TMEM220-203ENST00000578345 CHD2O14647 1828 aaKnown RBP25.34■■□□□ 1.65
TMEM220-203ENST00000578345 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
TMEM220-203ENST00000578345 PROSER2Q86WR7 435 aaPredicted RBP25.3■■□□□ 1.64
TMEM220-203ENST00000578345 TBX22Q9Y458 520 aa25.3■■□□□ 1.64
TMEM220-203ENST00000578345 ROBO1Q9Y6N7 1651 aa25.29■■□□□ 1.64
TMEM220-203ENST00000578345 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
TMEM220-203ENST00000578345 ADAMTS13Q76LX8 1427 aa25.29■■□□□ 1.64
TMEM220-203ENST00000578345 NEXMIFQ5QGS0 1516 aa25.27■■□□□ 1.64
TMEM220-203ENST00000578345 DIP2AQ14689 1571 aa25.23■■□□□ 1.63
TMEM220-203ENST00000578345 DHX57Q6P158 1386 aaKnown RBP25.22■■□□□ 1.63
TMEM220-203ENST00000578345 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
TMEM220-203ENST00000578345 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
TMEM220-203ENST00000578345 MSH6P52701 1360 aa25.2■■□□□ 1.63
TMEM220-203ENST00000578345 PPLO60437 1756 aa25.2■■□□□ 1.62
TMEM220-203ENST00000578345 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
TMEM220-203ENST00000578345 NRXN3Q9Y4C0 1643 aa25.19■■□□□ 1.62
TMEM220-203ENST00000578345 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
TMEM220-203ENST00000578345 PTPRUQ92729 1446 aa25.16■■□□□ 1.62
TMEM220-203ENST00000578345 RGS17Q9UGC6 210 aaPredicted RBP25.16■■□□□ 1.62
TMEM220-203ENST00000578345 ADGRF5Q8IZF2 1346 aa25.15■■□□□ 1.62
TMEM220-203ENST00000578345 DCAF11Q8TEB1 546 aa25.15■■□□□ 1.62
TMEM220-203ENST00000578345 NCOA3Q9Y6Q9 1424 aa25.13■■□□□ 1.61
TMEM220-203ENST00000578345 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.13■■□□□ 1.61
TMEM220-203ENST00000578345 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
TMEM220-203ENST00000578345 KDM2AQ9Y2K7 1162 aa25.13■■□□□ 1.61
TMEM220-203ENST00000578345 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
TMEM220-203ENST00000578345 NEUROD1Q13562 356 aa25.12■■□□□ 1.61
TMEM220-203ENST00000578345 AMOTL2Q9Y2J4 779 aa25.12■■□□□ 1.61
TMEM220-203ENST00000578345 XRN1Q8IZH2 1706 aaKnown RBP25.11■■□□□ 1.61
TMEM220-203ENST00000578345 IFT172Q9UG01 1749 aa25.11■■□□□ 1.61
TMEM220-203ENST00000578345 SIN3AQ96ST3 1273 aa25.1■■□□□ 1.61
TMEM220-203ENST00000578345 COL16A1Q07092 1604 aaPredicted RBP25.09■■□□□ 1.61
TMEM220-203ENST00000578345 MYOM2P54296 1465 aa25.09■■□□□ 1.61
TMEM220-203ENST00000578345 METP08581 1390 aa25.07■■□□□ 1.6
TMEM220-203ENST00000578345 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
TMEM220-203ENST00000578345 C14orf93Q9H972 538 aaKnown RBP25.05■■□□□ 1.6
TMEM220-203ENST00000578345 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
TMEM220-203ENST00000578345 C14orf37Q86TY3 774 aa25.02■■□□□ 1.6
TMEM220-203ENST00000578345 C19orf44Q9H6X5 657 aa25.02■■□□□ 1.6
TMEM220-203ENST00000578345 AHDC1Q5TGY3 1603 aaPredicted RBP25.01■■□□□ 1.59
TMEM220-203ENST00000578345 CFAP70Q5T0N1 1121 aa25.01■■□□□ 1.59
TMEM220-203ENST00000578345 L3MBTL2Q969R5 705 aa25■■□□□ 1.59
TMEM220-203ENST00000578345 JCADQ9P266 1359 aa25■■□□□ 1.59
TMEM220-203ENST00000578345 POTEAQ6S8J7 498 aa24.99■■□□□ 1.59
TMEM220-203ENST00000578345 CADPS2Q86UW7 1296 aa24.99■■□□□ 1.59
TMEM220-203ENST00000578345 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
TMEM220-203ENST00000578345 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
TMEM220-203ENST00000578345 DCCP43146 1447 aa24.97■■□□□ 1.59
TMEM220-203ENST00000578345 CLSPNQ9HAW4 1339 aa24.97■■□□□ 1.59
TMEM220-203ENST00000578345 ATF3P18847 181 aa24.96■■□□□ 1.59
TMEM220-203ENST00000578345 STK26Q9P289 416 aa24.96■■□□□ 1.59
TMEM220-203ENST00000578345 LRP6O75581 1613 aa24.96■■□□□ 1.59
TMEM220-203ENST00000578345 LAMC1P11047 1609 aa24.96■■□□□ 1.59
TMEM220-203ENST00000578345 TONSLQ96HA7 1378 aa24.95■■□□□ 1.59
TMEM220-203ENST00000578345 CCER1Q8TC90 406 aaPredicted RBP24.95■■□□□ 1.58
TMEM220-203ENST00000578345 NALCNQ8IZF0 1738 aa24.94■■□□□ 1.58
TMEM220-203ENST00000578345 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
TMEM220-203ENST00000578345 BRINP3Q76B58 766 aa24.93■■□□□ 1.58
TMEM220-203ENST00000578345 SHPRHQ149N8 1683 aa24.93■■□□□ 1.58
TMEM220-203ENST00000578345 MST1RQ04912 1400 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms