RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 GPRASP1Q5JY77 1395 aa18.7■□□□□ 0.58
CTC1-203ENST00000578240 IDI1Q13907 227 aa18.69■□□□□ 0.58
CTC1-203ENST00000578240 SETD1AO15047 1707 aaKnown RBP18.69■□□□□ 0.58
CTC1-203ENST00000578240 A2ML1A8K2U0 1454 aa18.69■□□□□ 0.58
CTC1-203ENST00000578240 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
CTC1-203ENST00000578240 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
CTC1-203ENST00000578240 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
CTC1-203ENST00000578240 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
CTC1-203ENST00000578240 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
CTC1-203ENST00000578240 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
CTC1-203ENST00000578240 SETBP1Q9Y6X0 1596 aa18.65■□□□□ 0.58
CTC1-203ENST00000578240 NRXN3Q9Y4C0 1643 aa18.65■□□□□ 0.58
CTC1-203ENST00000578240 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
CTC1-203ENST00000578240 TNRQ92752 1358 aa18.64■□□□□ 0.57
CTC1-203ENST00000578240 USP47Q96K76 1375 aa18.64■□□□□ 0.57
CTC1-203ENST00000578240 ADGRB1O14514 1584 aa18.63■□□□□ 0.57
CTC1-203ENST00000578240 ROCK2O75116 1388 aaKnown RBP18.63■□□□□ 0.57
CTC1-203ENST00000578240 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
CTC1-203ENST00000578240 ASXL1Q8IXJ9 1541 aa18.62■□□□□ 0.57
CTC1-203ENST00000578240 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
CTC1-203ENST00000578240 NLRP1Q9C000 1473 aa18.61■□□□□ 0.57
CTC1-203ENST00000578240 ZFYVE9O95405 1425 aa18.61■□□□□ 0.57
CTC1-203ENST00000578240 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
CTC1-203ENST00000578240 NBPF1Q3BBV0 1214 aa18.61■□□□□ 0.57
CTC1-203ENST00000578240 ARHGEF28Q8N1W1 1705 aaKnown RBP18.61■□□□□ 0.57
CTC1-203ENST00000578240 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
CTC1-203ENST00000578240 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
CTC1-203ENST00000578240 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
CTC1-203ENST00000578240 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
CTC1-203ENST00000578240 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
CTC1-203ENST00000578240 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
CTC1-203ENST00000578240 HSPA2P54652 639 aa18.56■□□□□ 0.56
CTC1-203ENST00000578240 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
CTC1-203ENST00000578240 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
CTC1-203ENST00000578240 ALKQ9UM73 1620 aa18.54■□□□□ 0.56
CTC1-203ENST00000578240 SCAF11Q99590 1463 aaKnown RBP18.54■□□□□ 0.56
CTC1-203ENST00000578240 SLIT1O75093 1534 aa18.53■□□□□ 0.56
CTC1-203ENST00000578240 ARHGAP23Q9P227 1491 aa18.52■□□□□ 0.56
CTC1-203ENST00000578240 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
CTC1-203ENST00000578240 C11orf95C9JLR9 678 aaPredicted RBP18.51■□□□□ 0.55
CTC1-203ENST00000578240 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
CTC1-203ENST00000578240 DIEXFQ68CQ4 756 aaKnown RBP18.51■□□□□ 0.55
CTC1-203ENST00000578240 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
CTC1-203ENST00000578240 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
CTC1-203ENST00000578240 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
CTC1-203ENST00000578240 MYOM1P52179 1685 aa18.49■□□□□ 0.55
CTC1-203ENST00000578240 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
CTC1-203ENST00000578240 TMEM2Q9UHN6 1383 aa18.48■□□□□ 0.55
CTC1-203ENST00000578240 C14orf93Q9H972 538 aaKnown RBP18.47■□□□□ 0.55
CTC1-203ENST00000578240 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
CTC1-203ENST00000578240 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
CTC1-203ENST00000578240 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
CTC1-203ENST00000578240 KIF7Q2M1P5 1343 aa18.45■□□□□ 0.54
CTC1-203ENST00000578240 TESK2Q96S53 571 aa18.44■□□□□ 0.54
CTC1-203ENST00000578240 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
CTC1-203ENST00000578240 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
CTC1-203ENST00000578240 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
CTC1-203ENST00000578240 MED14O60244 1454 aa18.4■□□□□ 0.54
CTC1-203ENST00000578240 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.53
CTC1-203ENST00000578240 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.53
CTC1-203ENST00000578240 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
CTC1-203ENST00000578240 STRCQ7RTU9 1775 aa18.38■□□□□ 0.53
CTC1-203ENST00000578240 CPS1P31327 1500 aa18.38■□□□□ 0.53
CTC1-203ENST00000578240 LTKP29376 864 aa18.38■□□□□ 0.53
CTC1-203ENST00000578240 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
CTC1-203ENST00000578240 YTHDC2Q9H6S0 1430 aaKnown RBP18.38■□□□□ 0.53
CTC1-203ENST00000578240 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
CTC1-203ENST00000578240 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
CTC1-203ENST00000578240 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
CTC1-203ENST00000578240 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
CTC1-203ENST00000578240 TULP4Q9NRJ4 1543 aa18.36■□□□□ 0.53
CTC1-203ENST00000578240 XRN1Q8IZH2 1706 aaKnown RBP18.36■□□□□ 0.53
CTC1-203ENST00000578240 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTC1-203ENST00000578240 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
CTC1-203ENST00000578240 METP08581 1390 aa18.34■□□□□ 0.53
CTC1-203ENST00000578240 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.52
CTC1-203ENST00000578240 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
CTC1-203ENST00000578240 TECPR2O15040 1411 aa18.31■□□□□ 0.52
CTC1-203ENST00000578240 LRPPRCP42704 1394 aaKnown RBP18.3■□□□□ 0.52
CTC1-203ENST00000578240 MIER1Q8N108 512 aa18.3■□□□□ 0.52
CTC1-203ENST00000578240 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
CTC1-203ENST00000578240 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
CTC1-203ENST00000578240 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
CTC1-203ENST00000578240 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.28■□□□□ 0.52
CTC1-203ENST00000578240 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
CTC1-203ENST00000578240 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
CTC1-203ENST00000578240 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
CTC1-203ENST00000578240 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
CTC1-203ENST00000578240 TMF1P82094 1093 aa18.25■□□□□ 0.51
CTC1-203ENST00000578240 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
CTC1-203ENST00000578240 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
CTC1-203ENST00000578240 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
CTC1-203ENST00000578240 STK26Q9P289 416 aa18.24■□□□□ 0.51
CTC1-203ENST00000578240 EID1Q9Y6B2 187 aa18.23■□□□□ 0.51
CTC1-203ENST00000578240 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
CTC1-203ENST00000578240 FAM135BQ49AJ0 1406 aa18.21■□□□□ 0.51
CTC1-203ENST00000578240 NWD1Q149M9 1564 aa18.21■□□□□ 0.51
CTC1-203ENST00000578240 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
CTC1-203ENST00000578240 ROBO2Q9HCK4 1378 aa18.2■□□□□ 0.5
CTC1-203ENST00000578240 STRCP1A6NGW2 1772 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms