RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
SREBF1-217ENST00000577897 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-217ENST00000577897 FGD6Q6ZV73 1430 aa21.34■■□□□ 1.01
SREBF1-217ENST00000577897 KANK1Q14678 1352 aa21.33■■□□□ 1
SREBF1-217ENST00000577897 ERBINQ96RT1 1412 aa21.32■■□□□ 1
SREBF1-217ENST00000577897 C14orf37Q86TY3 774 aa21.32■■□□□ 1
SREBF1-217ENST00000577897 ADGRB3O60242 1522 aa21.32■■□□□ 1
SREBF1-217ENST00000577897 RRP7BPQ9NSQ0 103 aa21.31■■□□□ 1
SREBF1-217ENST00000577897 SHPRHQ149N8 1683 aa21.31■■□□□ 1
SREBF1-217ENST00000577897 MYOM3Q5VTT5 1437 aa21.29■■□□□ 1
SREBF1-217ENST00000577897 NUTM2BA6NNL0 878 aaPredicted RBP21.29■■□□□ 1
SREBF1-217ENST00000577897 NUTM2EB1AL46 878 aaPredicted RBP21.29■■□□□ 1
SREBF1-217ENST00000577897 NUTM2AQ8IVF1 878 aaPredicted RBP21.29■■□□□ 1
SREBF1-217ENST00000577897 AHDC1Q5TGY3 1603 aaPredicted RBP21.27■■□□□ 1
SREBF1-217ENST00000577897 CHD2O14647 1828 aaKnown RBP21.27■□□□□ 0.99
SREBF1-217ENST00000577897 PPP1R15AO75807 674 aaPredicted RBP21.25■□□□□ 0.99
SREBF1-217ENST00000577897 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
SREBF1-217ENST00000577897 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
SREBF1-217ENST00000577897 AFF2P51816 1311 aa21.23■□□□□ 0.99
SREBF1-217ENST00000577897 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
SREBF1-217ENST00000577897 NOS1P29475 1434 aa21.22■□□□□ 0.99
SREBF1-217ENST00000577897 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.21■□□□□ 0.99
SREBF1-217ENST00000577897 ATF3P18847 181 aa21.21■□□□□ 0.99
SREBF1-217ENST00000577897 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
SREBF1-217ENST00000577897 RGS12O14924 1447 aa21.21■□□□□ 0.99
SREBF1-217ENST00000577897 ABCC5O15440 1437 aa21.2■□□□□ 0.98
SREBF1-217ENST00000577897 NCOA3Q9Y6Q9 1424 aa21.2■□□□□ 0.98
SREBF1-217ENST00000577897 DIP2AQ14689 1571 aa21.19■□□□□ 0.98
SREBF1-217ENST00000577897 SLC52A1Q9NWF4 448 aa21.19■□□□□ 0.98
SREBF1-217ENST00000577897 ZFYVE9O95405 1425 aa21.19■□□□□ 0.98
SREBF1-217ENST00000577897 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
SREBF1-217ENST00000577897 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
SREBF1-217ENST00000577897 FOXD1Q16676 465 aa21.18■□□□□ 0.98
SREBF1-217ENST00000577897 KANK4Q5T7N3 995 aaPredicted RBP21.18■□□□□ 0.98
SREBF1-217ENST00000577897 NUTM2DQ5VT03 806 aaPredicted RBP21.18■□□□□ 0.98
SREBF1-217ENST00000577897 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
SREBF1-217ENST00000577897 ZRANB1Q9UGI0 708 aa21.17■□□□□ 0.98
SREBF1-217ENST00000577897 GCC2Q8IWJ2 1684 aa21.17■□□□□ 0.98
SREBF1-217ENST00000577897 BRINP3Q76B58 766 aa21.16■□□□□ 0.98
SREBF1-217ENST00000577897 C8orf37Q96NL8 207 aa21.15■□□□□ 0.98
SREBF1-217ENST00000577897 DAPK1P53355 1430 aa21.14■□□□□ 0.98
SREBF1-217ENST00000577897 HDGFP51858 240 aaKnown RBP21.14■□□□□ 0.97
SREBF1-217ENST00000577897 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.97
SREBF1-217ENST00000577897 TBX22Q9Y458 520 aa21.14■□□□□ 0.97
SREBF1-217ENST00000577897 QTRT2Q9H974 415 aaKnown RBP21.13■□□□□ 0.97
SREBF1-217ENST00000577897 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
SREBF1-217ENST00000577897 RBM6P78332 1123 aaKnown RBP21.12■□□□□ 0.97
SREBF1-217ENST00000577897 EP400Q96L91 3159 aa21.11■□□□□ 0.97
SREBF1-217ENST00000577897 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
SREBF1-217ENST00000577897 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
SREBF1-217ENST00000577897 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
SREBF1-217ENST00000577897 ASXL1Q8IXJ9 1541 aa21.1■□□□□ 0.97
SREBF1-217ENST00000577897 ADAMTS13Q76LX8 1427 aa21.1■□□□□ 0.97
SREBF1-217ENST00000577897 TMEM131LA2VDJ0 1609 aa21.09■□□□□ 0.97
SREBF1-217ENST00000577897 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
SREBF1-217ENST00000577897 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.97
SREBF1-217ENST00000577897 SETBP1Q9Y6X0 1596 aa21.08■□□□□ 0.97
SREBF1-217ENST00000577897 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
SREBF1-217ENST00000577897 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
SREBF1-217ENST00000577897 NHSL1Q5SYE7 1610 aa21.06■□□□□ 0.96
SREBF1-217ENST00000577897 LRRC59Q96AG4 307 aaKnown RBP21.05■□□□□ 0.96
SREBF1-217ENST00000577897 AMOTL2Q9Y2J4 779 aa21.05■□□□□ 0.96
SREBF1-217ENST00000577897 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
SREBF1-217ENST00000577897 TRPM2O94759 1503 aa21.04■□□□□ 0.96
SREBF1-217ENST00000577897 DDX17Q92841 729 aaKnown RBP21.03■□□□□ 0.96
SREBF1-217ENST00000577897 NGLY1Q96IV0 654 aa21.03■□□□□ 0.96
SREBF1-217ENST00000577897 DCCP43146 1447 aa21.03■□□□□ 0.96
SREBF1-217ENST00000577897 PNPLA6Q8IY17 1366 aa21.02■□□□□ 0.96
SREBF1-217ENST00000577897 ADAMTS2O95450 1211 aa21.02■□□□□ 0.96
SREBF1-217ENST00000577897 MST1RQ04912 1400 aa21.02■□□□□ 0.96
SREBF1-217ENST00000577897 PTPRUQ92729 1446 aa21.02■□□□□ 0.96
SREBF1-217ENST00000577897 HRCP23327 699 aa20.99■□□□□ 0.95
SREBF1-217ENST00000577897 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-217ENST00000577897 UNC13BO14795 1591 aa20.95■□□□□ 0.94
SREBF1-217ENST00000577897 CCDC125Q86Z20 511 aa20.95■□□□□ 0.94
SREBF1-217ENST00000577897 USP21Q9UK80 565 aa20.95■□□□□ 0.94
SREBF1-217ENST00000577897 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
SREBF1-217ENST00000577897 ANKRD50Q9ULJ7 1429 aa20.94■□□□□ 0.94
SREBF1-217ENST00000577897 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
SREBF1-217ENST00000577897 ADGRL2O95490 1459 aa20.93■□□□□ 0.94
SREBF1-217ENST00000577897 E9PCH4 1651 aa20.9■□□□□ 0.94
SREBF1-217ENST00000577897 NRXN3Q9Y4C0 1643 aa20.89■□□□□ 0.93
SREBF1-217ENST00000577897 ADGRL3Q9HAR2 1447 aa20.88■□□□□ 0.93
SREBF1-217ENST00000577897 NALCNQ8IZF0 1738 aa20.88■□□□□ 0.93
SREBF1-217ENST00000577897 ATRNO75882 1429 aa20.87■□□□□ 0.93
SREBF1-217ENST00000577897 LRP5O75197 1615 aa20.85■□□□□ 0.93
SREBF1-217ENST00000577897 METP08581 1390 aa20.85■□□□□ 0.93
SREBF1-217ENST00000577897 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
SREBF1-217ENST00000577897 PTCH1Q13635 1447 aa20.84■□□□□ 0.93
SREBF1-217ENST00000577897 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
SREBF1-217ENST00000577897 FNBP4Q8N3X1 1017 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-217ENST00000577897 ZNF326Q5BKZ1 582 aaKnown RBP20.8■□□□□ 0.92
SREBF1-217ENST00000577897 ORAI2Q96SN7 254 aa20.8■□□□□ 0.92
SREBF1-217ENST00000577897 SOS2Q07890 1332 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-217ENST00000577897 LAMC1P11047 1609 aa20.79■□□□□ 0.92
SREBF1-217ENST00000577897 IQGAP3Q86VI3 1631 aa20.78■□□□□ 0.92
SREBF1-217ENST00000577897 COL22A1Q8NFW1 1626 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-217ENST00000577897 BLMP54132 1417 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-217ENST00000577897 BCL9LQ86UU0 1499 aa20.75■□□□□ 0.91
SREBF1-217ENST00000577897 DEFB132Q7Z7B7 95 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms