RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 MYOM2P54296 1465 aa19.07■□□□□ 0.64
RNF43-202ENST00000577625 PREX1Q8TCU6 1659 aa19.07■□□□□ 0.64
RNF43-202ENST00000577625 PPLO60437 1756 aa19.06■□□□□ 0.64
RNF43-202ENST00000577625 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
RNF43-202ENST00000577625 ST20-MTHFSA0A0A6YYL1 179 aa19.04■□□□□ 0.64
RNF43-202ENST00000577625 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
RNF43-202ENST00000577625 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
RNF43-202ENST00000577625 ARID4BQ4LE39 1312 aaPredicted RBP19.03■□□□□ 0.64
RNF43-202ENST00000577625 NRXN1Q9ULB1 1477 aa19.01■□□□□ 0.63
RNF43-202ENST00000577625 RBM19Q9Y4C8 960 aaKnown RBP19■□□□□ 0.63
RNF43-202ENST00000577625 MYO5BQ9ULV0 1848 aa18.99■□□□□ 0.63
RNF43-202ENST00000577625 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
RNF43-202ENST00000577625 ADGRF5Q8IZF2 1346 aa18.96■□□□□ 0.63
RNF43-202ENST00000577625 ERVK-7P63135 1459 aa18.96■□□□□ 0.63
RNF43-202ENST00000577625 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
RNF43-202ENST00000577625 NEXMIFQ5QGS0 1516 aa18.94■□□□□ 0.62
RNF43-202ENST00000577625 SCAF11Q99590 1463 aaKnown RBP18.94■□□□□ 0.62
RNF43-202ENST00000577625 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
RNF43-202ENST00000577625 TESK2Q96S53 571 aa18.93■□□□□ 0.62
RNF43-202ENST00000577625 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
RNF43-202ENST00000577625 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
RNF43-202ENST00000577625 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
RNF43-202ENST00000577625 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
RNF43-202ENST00000577625 SPATA31D1Q6ZQQ2 1576 aa18.92■□□□□ 0.62
RNF43-202ENST00000577625 IDI1Q13907 227 aa18.91■□□□□ 0.62
RNF43-202ENST00000577625 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
RNF43-202ENST00000577625 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
RNF43-202ENST00000577625 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
RNF43-202ENST00000577625 DISP3Q9P2K9 1392 aa18.89■□□□□ 0.62
RNF43-202ENST00000577625 MLECQ14165 292 aa18.89■□□□□ 0.62
RNF43-202ENST00000577625 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
RNF43-202ENST00000577625 MYO3AQ8NEV4 1616 aa18.87■□□□□ 0.61
RNF43-202ENST00000577625 ADGRB1O14514 1584 aa18.86■□□□□ 0.61
RNF43-202ENST00000577625 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
RNF43-202ENST00000577625 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
RNF43-202ENST00000577625 ZFYVE9O95405 1425 aa18.84■□□□□ 0.61
RNF43-202ENST00000577625 MSH5O43196 834 aa18.83■□□□□ 0.61
RNF43-202ENST00000577625 BCANQ96GW7 911 aa18.83■□□□□ 0.61
RNF43-202ENST00000577625 TMF1P82094 1093 aa18.83■□□□□ 0.6
RNF43-202ENST00000577625 C14orf93Q9H972 538 aaKnown RBP18.82■□□□□ 0.6
RNF43-202ENST00000577625 FKBP8Q14318 412 aa18.82■□□□□ 0.6
RNF43-202ENST00000577625 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
RNF43-202ENST00000577625 ZMYM3Q14202 1370 aa18.81■□□□□ 0.6
RNF43-202ENST00000577625 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
RNF43-202ENST00000577625 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
RNF43-202ENST00000577625 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
RNF43-202ENST00000577625 ESF1Q9H501 851 aaKnown RBP18.79■□□□□ 0.6
RNF43-202ENST00000577625 MYOM1P52179 1685 aa18.79■□□□□ 0.6
RNF43-202ENST00000577625 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
RNF43-202ENST00000577625 KDM5AP29375 1690 aaKnown RBP18.78■□□□□ 0.6
RNF43-202ENST00000577625 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
RNF43-202ENST00000577625 ARHGEF28Q8N1W1 1705 aaKnown RBP18.77■□□□□ 0.6
RNF43-202ENST00000577625 ASXL1Q8IXJ9 1541 aa18.76■□□□□ 0.59
RNF43-202ENST00000577625 FER1L4A9Z1Z3 1794 aa18.75■□□□□ 0.59
RNF43-202ENST00000577625 SBNO2Q9Y2G9 1366 aa18.75■□□□□ 0.59
RNF43-202ENST00000577625 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
RNF43-202ENST00000577625 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
RNF43-202ENST00000577625 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
RNF43-202ENST00000577625 NEFLP07196 543 aa18.72■□□□□ 0.59
RNF43-202ENST00000577625 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
RNF43-202ENST00000577625 C3P01024 1663 aa18.72■□□□□ 0.59
RNF43-202ENST00000577625 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
RNF43-202ENST00000577625 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
RNF43-202ENST00000577625 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
RNF43-202ENST00000577625 CENPJQ9HC77 1338 aaPredicted RBP18.71■□□□□ 0.59
RNF43-202ENST00000577625 TNRQ92752 1358 aa18.71■□□□□ 0.59
RNF43-202ENST00000577625 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
RNF43-202ENST00000577625 TRAK1Q9UPV9 953 aa18.71■□□□□ 0.59
RNF43-202ENST00000577625 SETD1AO15047 1707 aaKnown RBP18.7■□□□□ 0.58
RNF43-202ENST00000577625 ALKQ9UM73 1620 aa18.7■□□□□ 0.58
RNF43-202ENST00000577625 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
RNF43-202ENST00000577625 RIMS2Q9UQ26 1411 aa18.7■□□□□ 0.58
RNF43-202ENST00000577625 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
RNF43-202ENST00000577625 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
RNF43-202ENST00000577625 PANK3Q9H999 370 aa18.68■□□□□ 0.58
RNF43-202ENST00000577625 DEKP35659 375 aaKnown RBP18.66■□□□□ 0.58
RNF43-202ENST00000577625 NRXN3Q9Y4C0 1643 aa18.66■□□□□ 0.58
RNF43-202ENST00000577625 PARD3Q8TEW0 1356 aa18.66■□□□□ 0.58
RNF43-202ENST00000577625 RALBP1Q15311 655 aa18.65■□□□□ 0.58
RNF43-202ENST00000577625 PTPRMP28827 1452 aa18.64■□□□□ 0.57
RNF43-202ENST00000577625 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
RNF43-202ENST00000577625 ANO8Q9HCE9 1232 aaPredicted RBP18.64■□□□□ 0.57
RNF43-202ENST00000577625 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
RNF43-202ENST00000577625 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
RNF43-202ENST00000577625 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
RNF43-202ENST00000577625 MYBBP1AQ9BQG0 1328 aaKnown RBP18.62■□□□□ 0.57
RNF43-202ENST00000577625 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
RNF43-202ENST00000577625 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
RNF43-202ENST00000577625 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.572e-6■■□□□ 12.8
RNF43-202ENST00000577625 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
RNF43-202ENST00000577625 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
RNF43-202ENST00000577625 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.59■□□□□ 0.57
RNF43-202ENST00000577625 STK26Q9P289 416 aa18.58■□□□□ 0.57
RNF43-202ENST00000577625 TMEM2Q9UHN6 1383 aa18.58■□□□□ 0.56
RNF43-202ENST00000577625 CC2D1BQ5T0F9 858 aaKnown RBP18.57■□□□□ 0.56
RNF43-202ENST00000577625 RIMS1Q86UR5 1692 aaKnown RBP18.57■□□□□ 0.56
RNF43-202ENST00000577625 DLC1Q96QB1 1528 aa18.57■□□□□ 0.56
RNF43-202ENST00000577625 KNSTRNQ9Y448 316 aa18.56■□□□□ 0.56
RNF43-202ENST00000577625 AMER1Q5JTC6 1135 aaPredicted RBP18.55■□□□□ 0.56
RNF43-202ENST00000577625 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms