RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
NDE1-208ENST00000573694 KCNA6P17658 529 aa13.95□□□□□ -0.18
NDE1-208ENST00000573694 SYNMO15061 1565 aa13.94□□□□□ -0.18
NDE1-208ENST00000573694 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
NDE1-208ENST00000573694 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
NDE1-208ENST00000573694 TBX22Q9Y458 520 aa13.92□□□□□ -0.18
NDE1-208ENST00000573694 PIK3C2BO00750 1634 aa13.92□□□□□ -0.18
NDE1-208ENST00000573694 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
NDE1-208ENST00000573694 ADGRB3O60242 1522 aa13.91□□□□□ -0.18
NDE1-208ENST00000573694 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
NDE1-208ENST00000573694 NUP155O75694 1391 aa13.91□□□□□ -0.18
NDE1-208ENST00000573694 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
NDE1-208ENST00000573694 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
NDE1-208ENST00000573694 MPHOSPH9Q99550 1183 aa13.9□□□□□ -0.18
NDE1-208ENST00000573694 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.19
NDE1-208ENST00000573694 FOXD1Q16676 465 aa13.88□□□□□ -0.19
NDE1-208ENST00000573694 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
NDE1-208ENST00000573694 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
NDE1-208ENST00000573694 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
NDE1-208ENST00000573694 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
NDE1-208ENST00000573694 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
NDE1-208ENST00000573694 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
NDE1-208ENST00000573694 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
NDE1-208ENST00000573694 TMEM131LA2VDJ0 1609 aa13.84□□□□□ -0.19
NDE1-208ENST00000573694 DIP2AQ14689 1571 aa13.83□□□□□ -0.19
NDE1-208ENST00000573694 TONSLQ96HA7 1378 aa13.83□□□□□ -0.2
NDE1-208ENST00000573694 HSPA1LP34931 641 aa13.82□□□□□ -0.2
NDE1-208ENST00000573694 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
NDE1-208ENST00000573694 E9PCH4 1651 aa13.82□□□□□ -0.2
NDE1-208ENST00000573694 NWD1Q149M9 1564 aa13.81□□□□□ -0.2
NDE1-208ENST00000573694 PIP4K2BP78356 416 aa13.81□□□□□ -0.2
NDE1-208ENST00000573694 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
NDE1-208ENST00000573694 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
NDE1-208ENST00000573694 TMEM94Q12767 1356 aa13.81□□□□□ -0.2
NDE1-208ENST00000573694 BCANQ96GW7 911 aa13.8□□□□□ -0.2
NDE1-208ENST00000573694 STRCP1A6NGW2 1772 aa13.8□□□□□ -0.2
NDE1-208ENST00000573694 MSH6P52701 1360 aa13.8□□□□□ -0.2
NDE1-208ENST00000573694 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
NDE1-208ENST00000573694 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
NDE1-208ENST00000573694 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
NDE1-208ENST00000573694 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
NDE1-208ENST00000573694 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
NDE1-208ENST00000573694 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
NDE1-208ENST00000573694 C19orf44Q9H6X5 657 aa13.77□□□□□ -0.21
NDE1-208ENST00000573694 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
NDE1-208ENST00000573694 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
NDE1-208ENST00000573694 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
NDE1-208ENST00000573694 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
NDE1-208ENST00000573694 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
NDE1-208ENST00000573694 SLAIN2Q9P270 581 aa13.75□□□□□ -0.21
NDE1-208ENST00000573694 DCCP43146 1447 aa13.74□□□□□ -0.21
NDE1-208ENST00000573694 TRPM2O94759 1503 aa13.74□□□□□ -0.21
NDE1-208ENST00000573694 SETBP1Q9Y6X0 1596 aa13.73□□□□□ -0.21
NDE1-208ENST00000573694 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.21
NDE1-208ENST00000573694 ATF3P18847 181 aa13.71□□□□□ -0.21
NDE1-208ENST00000573694 ZNF326Q5BKZ1 582 aaKnown RBP13.71□□□□□ -0.21
NDE1-208ENST00000573694 AMOTL2Q9Y2J4 779 aa13.71□□□□□ -0.21
NDE1-208ENST00000573694 MYO5BQ9ULV0 1848 aa13.7□□□□□ -0.22
NDE1-208ENST00000573694 CLTCL1P53675 1640 aa13.69□□□□□ -0.22
NDE1-208ENST00000573694 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
NDE1-208ENST00000573694 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
NDE1-208ENST00000573694 STAC3Q96MF2 364 aa13.68□□□□□ -0.22
NDE1-208ENST00000573694 KIF1BO60333 1816 aa13.67□□□□□ -0.22
NDE1-208ENST00000573694 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
NDE1-208ENST00000573694 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
NDE1-208ENST00000573694 JCADQ9P266 1359 aa13.65□□□□□ -0.22
NDE1-208ENST00000573694 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
NDE1-208ENST00000573694 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
NDE1-208ENST00000573694 NEXMIFQ5QGS0 1516 aa13.64□□□□□ -0.23
NDE1-208ENST00000573694 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
NDE1-208ENST00000573694 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
NDE1-208ENST00000573694 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
NDE1-208ENST00000573694 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
NDE1-208ENST00000573694 PTPRUQ92729 1446 aa13.62□□□□□ -0.23
NDE1-208ENST00000573694 ROBO1Q9Y6N7 1651 aa13.62□□□□□ -0.23
NDE1-208ENST00000573694 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
NDE1-208ENST00000573694 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
NDE1-208ENST00000573694 NRXN3Q9Y4C0 1643 aa13.61□□□□□ -0.23
NDE1-208ENST00000573694 METP08581 1390 aa13.6□□□□□ -0.23
NDE1-208ENST00000573694 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
NDE1-208ENST00000573694 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
NDE1-208ENST00000573694 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
NDE1-208ENST00000573694 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
NDE1-208ENST00000573694 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
NDE1-208ENST00000573694 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
NDE1-208ENST00000573694 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
NDE1-208ENST00000573694 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
NDE1-208ENST00000573694 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
NDE1-208ENST00000573694 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
NDE1-208ENST00000573694 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
NDE1-208ENST00000573694 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
NDE1-208ENST00000573694 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
NDE1-208ENST00000573694 TECPR2O15040 1411 aa13.56□□□□□ -0.24
NDE1-208ENST00000573694 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
NDE1-208ENST00000573694 MST1RQ04912 1400 aa13.55□□□□□ -0.24
NDE1-208ENST00000573694 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
NDE1-208ENST00000573694 PPLO60437 1756 aa13.53□□□□□ -0.24
NDE1-208ENST00000573694 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
NDE1-208ENST00000573694 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
NDE1-208ENST00000573694 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms