RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
PRPF8-207ENST00000573681 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
PRPF8-207ENST00000573681 MADDQ8WXG6 1647 aa17.88■□□□□ 0.45
PRPF8-207ENST00000573681 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
PRPF8-207ENST00000573681 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
PRPF8-207ENST00000573681 ZFYVE9O95405 1425 aa17.88■□□□□ 0.45
PRPF8-207ENST00000573681 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
PRPF8-207ENST00000573681 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
PRPF8-207ENST00000573681 CLTCQ00610 1675 aaKnown RBP17.86■□□□□ 0.45
PRPF8-207ENST00000573681 HDGFP51858 240 aaKnown RBP17.85■□□□□ 0.45
PRPF8-207ENST00000573681 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
PRPF8-207ENST00000573681 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
PRPF8-207ENST00000573681 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.45
PRPF8-207ENST00000573681 CFAP65Q6ZU64 1925 aaKnown RBP17.83■□□□□ 0.44
PRPF8-207ENST00000573681 TMF1P82094 1093 aa17.83■□□□□ 0.44
PRPF8-207ENST00000573681 TESK2Q96S53 571 aa17.83■□□□□ 0.44
PRPF8-207ENST00000573681 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
PRPF8-207ENST00000573681 TNRQ92752 1358 aa17.81■□□□□ 0.44
PRPF8-207ENST00000573681 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
PRPF8-207ENST00000573681 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
PRPF8-207ENST00000573681 CDCA8Q53HL2 280 aa17.81■□□□□ 0.44
PRPF8-207ENST00000573681 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRPF8-207ENST00000573681 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
PRPF8-207ENST00000573681 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
PRPF8-207ENST00000573681 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
PRPF8-207ENST00000573681 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.44
PRPF8-207ENST00000573681 A2ML1A8K2U0 1454 aa17.77■□□□□ 0.44
PRPF8-207ENST00000573681 PPLO60437 1756 aa17.77■□□□□ 0.44
PRPF8-207ENST00000573681 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
PRPF8-207ENST00000573681 SETBP1Q9Y6X0 1596 aa17.76■□□□□ 0.43
PRPF8-207ENST00000573681 CEBPAP49715 358 aaPredicted RBP17.73■□□□□ 0.43
PRPF8-207ENST00000573681 RIMS2Q9UQ26 1411 aa17.72■□□□□ 0.43
PRPF8-207ENST00000573681 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
PRPF8-207ENST00000573681 NLRP1Q9C000 1473 aa17.72■□□□□ 0.43
PRPF8-207ENST00000573681 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
PRPF8-207ENST00000573681 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
PRPF8-207ENST00000573681 CENPJQ9HC77 1338 aaPredicted RBP17.71■□□□□ 0.42
PRPF8-207ENST00000573681 IQGAP1P46940 1657 aa17.71■□□□□ 0.42
PRPF8-207ENST00000573681 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
PRPF8-207ENST00000573681 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
PRPF8-207ENST00000573681 PRKRIP1Q9H875 184 aaPredicted RBP17.69■□□□□ 0.42
PRPF8-207ENST00000573681 ADGRB1O14514 1584 aa17.68■□□□□ 0.42
PRPF8-207ENST00000573681 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
PRPF8-207ENST00000573681 THEMISQ8N1K5 641 aaPredicted RBP17.67■□□□□ 0.42
PRPF8-207ENST00000573681 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
PRPF8-207ENST00000573681 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
PRPF8-207ENST00000573681 KDM5AP29375 1690 aaKnown RBP17.65■□□□□ 0.42
PRPF8-207ENST00000573681 PANK3Q9H999 370 aa17.64■□□□□ 0.41
PRPF8-207ENST00000573681 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
PRPF8-207ENST00000573681 KTN1Q86UP2 1357 aaKnown RBP17.64■□□□□ 0.41
PRPF8-207ENST00000573681 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
PRPF8-207ENST00000573681 RALBP1Q15311 655 aa17.62■□□□□ 0.41
PRPF8-207ENST00000573681 TXNDC2Q86VQ3 553 aa17.62■□□□□ 0.41
PRPF8-207ENST00000573681 SIRT1Q96EB6 747 aa17.62■□□□□ 0.41
PRPF8-207ENST00000573681 YTHDC1Q96MU7 727 aaKnown RBP17.62■□□□□ 0.41
PRPF8-207ENST00000573681 STK26Q9P289 416 aa17.62■□□□□ 0.41
PRPF8-207ENST00000573681 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
PRPF8-207ENST00000573681 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
PRPF8-207ENST00000573681 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
PRPF8-207ENST00000573681 FER1L4A9Z1Z3 1794 aa17.61■□□□□ 0.41
PRPF8-207ENST00000573681 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
PRPF8-207ENST00000573681 BCANQ96GW7 911 aa17.6■□□□□ 0.41
PRPF8-207ENST00000573681 POGKQ9P215 609 aa17.6■□□□□ 0.41
PRPF8-207ENST00000573681 EVC2Q86UK5 1308 aa17.6■□□□□ 0.41
PRPF8-207ENST00000573681 C3P01024 1663 aa17.6■□□□□ 0.41
PRPF8-207ENST00000573681 LRPPRCP42704 1394 aaKnown RBP17.59■□□□□ 0.41
PRPF8-207ENST00000573681 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
PRPF8-207ENST00000573681 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
PRPF8-207ENST00000573681 PLEKHG1Q9ULL1 1385 aa17.57■□□□□ 0.4
PRPF8-207ENST00000573681 UBR1Q8IWV7 1749 aa17.56■□□□□ 0.4
PRPF8-207ENST00000573681 LTKP29376 864 aa17.56■□□□□ 0.4
PRPF8-207ENST00000573681 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
PRPF8-207ENST00000573681 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
PRPF8-207ENST00000573681 KNSTRNQ9Y448 316 aa17.56■□□□□ 0.4
PRPF8-207ENST00000573681 ARHGAP23Q9P227 1491 aa17.55■□□□□ 0.4
PRPF8-207ENST00000573681 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
PRPF8-207ENST00000573681 SLIT1O75093 1534 aa17.54■□□□□ 0.4
PRPF8-207ENST00000573681 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
PRPF8-207ENST00000573681 ASXL1Q8IXJ9 1541 aa17.53■□□□□ 0.4
PRPF8-207ENST00000573681 DLC1Q96QB1 1528 aa17.52■□□□□ 0.4
PRPF8-207ENST00000573681 PTPRMP28827 1452 aa17.52■□□□□ 0.4
PRPF8-207ENST00000573681 MRS2Q9HD23 443 aa17.52■□□□□ 0.4
PRPF8-207ENST00000573681 METP08581 1390 aa17.51■□□□□ 0.39
PRPF8-207ENST00000573681 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
PRPF8-207ENST00000573681 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
PRPF8-207ENST00000573681 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
PRPF8-207ENST00000573681 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
PRPF8-207ENST00000573681 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
PRPF8-207ENST00000573681 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
PRPF8-207ENST00000573681 ADAMTS13Q76LX8 1427 aa17.48■□□□□ 0.39
PRPF8-207ENST00000573681 TMC1Q8TDI8 760 aa17.48■□□□□ 0.39
PRPF8-207ENST00000573681 PARD3Q8TEW0 1356 aa17.48■□□□□ 0.39
PRPF8-207ENST00000573681 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
PRPF8-207ENST00000573681 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
PRPF8-207ENST00000573681 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
PRPF8-207ENST00000573681 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
PRPF8-207ENST00000573681 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
PRPF8-207ENST00000573681 MED14O60244 1454 aa17.47■□□□□ 0.39
PRPF8-207ENST00000573681 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
PRPF8-207ENST00000573681 TECPR2O15040 1411 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms