RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
SMG6-210ENST00000572205 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
SMG6-210ENST00000572205 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
SMG6-210ENST00000572205 KIF1BO60333 1816 aa13.25□□□□□ -0.29
SMG6-210ENST00000572205 IQSEC2Q5JU85 1478 aa13.25□□□□□ -0.29
SMG6-210ENST00000572205 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
SMG6-210ENST00000572205 PKD2Q13563 968 aa13.25□□□□□ -0.29
SMG6-210ENST00000572205 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
SMG6-210ENST00000572205 NEXMIFQ5QGS0 1516 aa13.24□□□□□ -0.29
SMG6-210ENST00000572205 MSH5O43196 834 aa13.24□□□□□ -0.29
SMG6-210ENST00000572205 PPLO60437 1756 aa13.23□□□□□ -0.29
SMG6-210ENST00000572205 IDI1Q13907 227 aa13.23□□□□□ -0.29
SMG6-210ENST00000572205 CHD2O14647 1828 aaKnown RBP13.22□□□□□ -0.29
SMG6-210ENST00000572205 ZNF335Q9H4Z2 1342 aaPredicted RBP13.21□□□□□ -0.29
SMG6-210ENST00000572205 LTKP29376 864 aa13.21□□□□□ -0.29
SMG6-210ENST00000572205 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
SMG6-210ENST00000572205 CPS1P31327 1500 aa13.2□□□□□ -0.3
SMG6-210ENST00000572205 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
SMG6-210ENST00000572205 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
SMG6-210ENST00000572205 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
SMG6-210ENST00000572205 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
SMG6-210ENST00000572205 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
SMG6-210ENST00000572205 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
SMG6-210ENST00000572205 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
SMG6-210ENST00000572205 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
SMG6-210ENST00000572205 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
SMG6-210ENST00000572205 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
SMG6-210ENST00000572205 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
SMG6-210ENST00000572205 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
SMG6-210ENST00000572205 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
SMG6-210ENST00000572205 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
SMG6-210ENST00000572205 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
SMG6-210ENST00000572205 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
SMG6-210ENST00000572205 FBXO41Q8TF61 875 aa13.11□□□□□ -0.31
SMG6-210ENST00000572205 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
SMG6-210ENST00000572205 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
SMG6-210ENST00000572205 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
SMG6-210ENST00000572205 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
SMG6-210ENST00000572205 PTPRUQ92729 1446 aa13.08□□□□□ -0.32
SMG6-210ENST00000572205 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
SMG6-210ENST00000572205 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
SMG6-210ENST00000572205 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
SMG6-210ENST00000572205 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
SMG6-210ENST00000572205 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.04□□□□□ -0.32
SMG6-210ENST00000572205 ANKRD30BQ9BXX2 1392 aa13.04□□□□□ -0.32
SMG6-210ENST00000572205 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
SMG6-210ENST00000572205 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
SMG6-210ENST00000572205 MYOM2P54296 1465 aa13.03□□□□□ -0.32
SMG6-210ENST00000572205 LAMC1P11047 1609 aa13.02□□□□□ -0.32
SMG6-210ENST00000572205 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
SMG6-210ENST00000572205 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
SMG6-210ENST00000572205 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
SMG6-210ENST00000572205 HRCP23327 699 aa13.01□□□□□ -0.33
SMG6-210ENST00000572205 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
SMG6-210ENST00000572205 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
SMG6-210ENST00000572205 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
SMG6-210ENST00000572205 METP08581 1390 aa13.01□□□□□ -0.33
SMG6-210ENST00000572205 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
SMG6-210ENST00000572205 FKBP8Q14318 412 aa13□□□□□ -0.33
SMG6-210ENST00000572205 NUTM2DQ5VT03 806 aaPredicted RBP13□□□□□ -0.33
SMG6-210ENST00000572205 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
SMG6-210ENST00000572205 KCNA6P17658 529 aa12.98□□□□□ -0.33
SMG6-210ENST00000572205 TBX22Q9Y458 520 aa12.98□□□□□ -0.33
SMG6-210ENST00000572205 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
SMG6-210ENST00000572205 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
SMG6-210ENST00000572205 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SMG6-210ENST00000572205 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMG6-210ENST00000572205 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
SMG6-210ENST00000572205 TECPR2O15040 1411 aa12.96□□□□□ -0.34
SMG6-210ENST00000572205 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
SMG6-210ENST00000572205 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
SMG6-210ENST00000572205 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
SMG6-210ENST00000572205 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
SMG6-210ENST00000572205 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
SMG6-210ENST00000572205 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
SMG6-210ENST00000572205 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
SMG6-210ENST00000572205 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
SMG6-210ENST00000572205 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
SMG6-210ENST00000572205 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
SMG6-210ENST00000572205 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
SMG6-210ENST00000572205 DCCP43146 1447 aa12.92□□□□□ -0.34
SMG6-210ENST00000572205 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
SMG6-210ENST00000572205 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
SMG6-210ENST00000572205 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
SMG6-210ENST00000572205 ROBO2Q9HCK4 1378 aa12.91□□□□□ -0.34
SMG6-210ENST00000572205 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
SMG6-210ENST00000572205 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.34
SMG6-210ENST00000572205 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
SMG6-210ENST00000572205 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
SMG6-210ENST00000572205 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
SMG6-210ENST00000572205 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
SMG6-210ENST00000572205 HDGFP51858 240 aaKnown RBP12.89□□□□□ -0.35
SMG6-210ENST00000572205 MST1RQ04912 1400 aa12.88□□□□□ -0.35
SMG6-210ENST00000572205 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
SMG6-210ENST00000572205 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
SMG6-210ENST00000572205 MED1Q15648 1581 aaPredicted RBP12.88□□□□□ -0.35
SMG6-210ENST00000572205 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
SMG6-210ENST00000572205 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
SMG6-210ENST00000572205 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
SMG6-210ENST00000572205 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms