RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 NRXN1Q9ULB1 1477 aa23.44■■□□□ 1.34
TSC2-225ENST00000569110 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
TSC2-225ENST00000569110 ROCK2O75116 1388 aaKnown RBP23.43■■□□□ 1.34
TSC2-225ENST00000569110 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
TSC2-225ENST00000569110 NEXMIFQ5QGS0 1516 aa23.43■■□□□ 1.34
TSC2-225ENST00000569110 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
TSC2-225ENST00000569110 LAMC1P11047 1609 aa23.42■■□□□ 1.34
TSC2-225ENST00000569110 ADGRF5Q8IZF2 1346 aa23.42■■□□□ 1.34
TSC2-225ENST00000569110 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
TSC2-225ENST00000569110 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
TSC2-225ENST00000569110 TNRQ92752 1358 aa23.4■■□□□ 1.34
TSC2-225ENST00000569110 USP47Q96K76 1375 aa23.4■■□□□ 1.34
TSC2-225ENST00000569110 CEBPAP49715 358 aaPredicted RBP23.39■■□□□ 1.34
TSC2-225ENST00000569110 A2ML1A8K2U0 1454 aa23.37■■□□□ 1.33
TSC2-225ENST00000569110 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
TSC2-225ENST00000569110 ZFYVE9O95405 1425 aa23.35■■□□□ 1.33
TSC2-225ENST00000569110 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
TSC2-225ENST00000569110 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
TSC2-225ENST00000569110 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
TSC2-225ENST00000569110 UBR1Q8IWV7 1749 aa23.32■■□□□ 1.32
TSC2-225ENST00000569110 CFAP70Q5T0N1 1121 aa23.32■■□□□ 1.32
TSC2-225ENST00000569110 POLR1AO95602 1720 aaPredicted RBP23.32■■□□□ 1.32
TSC2-225ENST00000569110 IQGAP1P46940 1657 aa23.31■■□□□ 1.32
TSC2-225ENST00000569110 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
TSC2-225ENST00000569110 NLRP1Q9C000 1473 aa23.3■■□□□ 1.32
TSC2-225ENST00000569110 C11orf95C9JLR9 678 aaPredicted RBP23.28■■□□□ 1.32
TSC2-225ENST00000569110 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
TSC2-225ENST00000569110 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
TSC2-225ENST00000569110 SETBP1Q9Y6X0 1596 aa23.27■■□□□ 1.32
TSC2-225ENST00000569110 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
TSC2-225ENST00000569110 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
TSC2-225ENST00000569110 SCAF11Q99590 1463 aaKnown RBP23.23■■□□□ 1.31
TSC2-225ENST00000569110 ADGRB1O14514 1584 aa23.23■■□□□ 1.31
TSC2-225ENST00000569110 MYO3AQ8NEV4 1616 aa23.23■■□□□ 1.31
TSC2-225ENST00000569110 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
TSC2-225ENST00000569110 SETD1BQ9UPS6 1966 aaKnown RBP23.22■■□□□ 1.31
TSC2-225ENST00000569110 CCDC7Q96M83 1385 aa23.21■■□□□ 1.31
TSC2-225ENST00000569110 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
TSC2-225ENST00000569110 KIF7Q2M1P5 1343 aa23.19■■□□□ 1.3
TSC2-225ENST00000569110 TESK2Q96S53 571 aa23.18■■□□□ 1.3
TSC2-225ENST00000569110 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.17■■□□□ 1.3
TSC2-225ENST00000569110 ALKQ9UM73 1620 aa23.16■■□□□ 1.3
TSC2-225ENST00000569110 TMEM132EQ6IEE7 984 aa23.16■■□□□ 1.3
TSC2-225ENST00000569110 ASXL1Q8IXJ9 1541 aa23.15■■□□□ 1.3
TSC2-225ENST00000569110 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
TSC2-225ENST00000569110 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.3
TSC2-225ENST00000569110 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
TSC2-225ENST00000569110 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.29
TSC2-225ENST00000569110 SLIT1O75093 1534 aa23.13■■□□□ 1.29
TSC2-225ENST00000569110 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
TSC2-225ENST00000569110 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
TSC2-225ENST00000569110 ZNF142P52746 1687 aaPredicted RBP23.12■■□□□ 1.29
TSC2-225ENST00000569110 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
TSC2-225ENST00000569110 THEMISQ8N1K5 641 aaPredicted RBP23.1■■□□□ 1.29
TSC2-225ENST00000569110 LTKP29376 864 aa23.09■■□□□ 1.29
TSC2-225ENST00000569110 MIER1Q8N108 512 aa23.09■■□□□ 1.29
TSC2-225ENST00000569110 ARHGEF28Q8N1W1 1705 aaKnown RBP23.09■■□□□ 1.29
TSC2-225ENST00000569110 LMTK3Q96Q04 1460 aa23.09■■□□□ 1.29
TSC2-225ENST00000569110 HSPA2P54652 639 aa23.08■■□□□ 1.29
TSC2-225ENST00000569110 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
TSC2-225ENST00000569110 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
TSC2-225ENST00000569110 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
TSC2-225ENST00000569110 PLEKHG1Q9ULL1 1385 aa23.05■■□□□ 1.28
TSC2-225ENST00000569110 QRICH2Q9H0J4 1663 aa23.04■■□□□ 1.28
TSC2-225ENST00000569110 TMF1P82094 1093 aa23.04■■□□□ 1.28
TSC2-225ENST00000569110 YTHDC2Q9H6S0 1430 aaKnown RBP23.04■■□□□ 1.28
TSC2-225ENST00000569110 EID1Q9Y6B2 187 aa23.03■■□□□ 1.28
TSC2-225ENST00000569110 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
TSC2-225ENST00000569110 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
TSC2-225ENST00000569110 SBNO2Q9Y2G9 1366 aa23.02■■□□□ 1.28
TSC2-225ENST00000569110 ADAMTS13Q76LX8 1427 aa23.01■■□□□ 1.27
TSC2-225ENST00000569110 STK26Q9P289 416 aa23■■□□□ 1.27
TSC2-225ENST00000569110 MED14O60244 1454 aa23■■□□□ 1.27
TSC2-225ENST00000569110 METP08581 1390 aa23■■□□□ 1.27
TSC2-225ENST00000569110 LRPPRCP42704 1394 aaKnown RBP22.98■■□□□ 1.27
TSC2-225ENST00000569110 SLC24A1O60721 1099 aa22.98■■□□□ 1.27
TSC2-225ENST00000569110 BCANQ96GW7 911 aa22.97■■□□□ 1.27
TSC2-225ENST00000569110 DLC1Q96QB1 1528 aa22.96■■□□□ 1.27
TSC2-225ENST00000569110 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
TSC2-225ENST00000569110 KNDC1Q76NI1 1749 aa22.95■■□□□ 1.26
TSC2-225ENST00000569110 ABCC11Q96J66 1382 aa22.95■■□□□ 1.26
TSC2-225ENST00000569110 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
TSC2-225ENST00000569110 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
TSC2-225ENST00000569110 PRAM1Q96QH2 718 aa22.91■■□□□ 1.26
TSC2-225ENST00000569110 TBX22Q9Y458 520 aa22.91■■□□□ 1.26
TSC2-225ENST00000569110 DIP2AQ14689 1571 aa22.91■■□□□ 1.26
TSC2-225ENST00000569110 TECPR2O15040 1411 aa22.9■■□□□ 1.26
TSC2-225ENST00000569110 MYOM1P52179 1685 aa22.9■■□□□ 1.26
TSC2-225ENST00000569110 SLC26A8Q96RN1 970 aa22.9■■□□□ 1.26
TSC2-225ENST00000569110 ANP32CO43423 234 aa22.9■■□□□ 1.26
TSC2-225ENST00000569110 CPS1P31327 1500 aa22.88■■□□□ 1.25
TSC2-225ENST00000569110 TULP4Q9NRJ4 1543 aa22.88■■□□□ 1.25
TSC2-225ENST00000569110 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
TSC2-225ENST00000569110 SIRT1Q96EB6 747 aa22.87■■□□□ 1.25
TSC2-225ENST00000569110 POGKQ9P215 609 aa22.87■■□□□ 1.25
TSC2-225ENST00000569110 PTPRUQ92729 1446 aa22.86■■□□□ 1.25
TSC2-225ENST00000569110 PLEKHH1Q9ULM0 1364 aa22.85■■□□□ 1.25
TSC2-225ENST00000569110 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
TSC2-225ENST00000569110 FAM135BQ49AJ0 1406 aa22.85■■□□□ 1.25
TSC2-225ENST00000569110 EVC2Q86UK5 1308 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms