RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 EFTUD2Q15029 972 aaKnown RBP eCLIP16.76■□□□□ 0.277e-11■■■■■ 59.9
TSC2-225ENST00000569110 PPIGQ13427 754 aaKnown RBP eCLIP17.48■□□□□ 0.394e-9■■□□□ 14.4
TSC2-225ENST00000569110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.3■□□□□ 0.686e-9■■■■□ 26.7
TSC2-225ENST00000569110 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.388e-9■■■■□ 19.6
TSC2-225ENST00000569110 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.269e-9■■■■■ 52.5
TSC2-225ENST00000569110 RBFOX2O43251 390 aaKnown RBP eCLIP13.47□□□□□ -0.259e-9■■■□□ 16.8
TSC2-225ENST00000569110 SF3B4Q15427 424 aaKnown RBP eCLIP14.55□□□□□ -0.083e-8■■■■■ 40.4
TSC2-225ENST00000569110 ZNF622Q969S3 477 aaKnown RBP eCLIP20■□□□□ 0.796e-8■■□□□ 13
TSC2-225ENST00000569110 SF3A3Q12874 501 aaKnown RBP eCLIP16.3■□□□□ 0.27e-8■■■■□ 25.4
TSC2-225ENST00000569110 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.71e-7■■■■■ 29
TSC2-225ENST00000569110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.16■■□□□ 1.621e-7■■■■■ 49.8
TSC2-225ENST00000569110 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■■□□ 14.6
TSC2-225ENST00000569110 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■■□□□ 13.6
TSC2-225ENST00000569110 YBX3P16989 372 aaKnown RBP eCLIP19.64■□□□□ 0.737e-7■□□□□ 8.5
TSC2-225ENST00000569110 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.877e-7■■■■■ 38.9
TSC2-225ENST00000569110 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.398e-7■■■□□ 18.8
TSC2-225ENST00000569110 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.96■□□□□ 0.791e-6■■■■□ 21.5
TSC2-225ENST00000569110 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■□□□ 14.1
TSC2-225ENST00000569110 PRPF4O43172 522 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■□□□□ 8.4
TSC2-225ENST00000569110 PABPC4Q13310 644 aaKnown RBP eCLIP18.76■□□□□ 0.592e-6■■■□□ 15.9
TSC2-225ENST00000569110 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.9■□□□□ 0.463e-6■■■■■ 151.4
TSC2-225ENST00000569110 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.9□□□□□ -0.024e-6■■□□□ 11.7
TSC2-225ENST00000569110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.11■□□□□ 0.494e-6■■□□□ 12.6
TSC2-225ENST00000569110 LSM11P83369 360 aaKnown RBP eCLIP15.2■□□□□ 0.025e-6■■■■□ 21
TSC2-225ENST00000569110 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.67■□□□□ 0.267e-6■■■■□ 20.2
TSC2-225ENST00000569110 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.47■□□□□ 0.237e-6■■■■■ 27.5
Retrieved 26 of 26 RNA–protein pairs in 21.8 ms