RNA–Protein interactions for RNA: ENST00000569075.5

TMEM87A-213, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,369 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-213ENST00000569075 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
TMEM87A-213ENST00000569075 GPR37O15354 613 aa8.81□□□□□ -1
TMEM87A-213ENST00000569075 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
TMEM87A-213ENST00000569075 FECHP22830 423 aa8.8□□□□□ -1
TMEM87A-213ENST00000569075 ADGRG1Q9Y653 693 aa8.8□□□□□ -1
TMEM87A-213ENST00000569075 IFFO2Q5TF58 517 aa8.79□□□□□ -1
TMEM87A-213ENST00000569075 SWT1Q5T5J6 900 aaKnown RBP8.78□□□□□ -1
TMEM87A-213ENST00000569075 FCHSD2O94868 740 aa8.77□□□□□ -1.01
TMEM87A-213ENST00000569075 ITGBL1O95965 494 aaPredicted RBP8.77□□□□□ -1.01
TMEM87A-213ENST00000569075 PPP4CP60510 307 aa8.76□□□□□ -1.01
TMEM87A-213ENST00000569075 NYAP1Q6ZVC0 841 aa8.75□□□□□ -1.01
TMEM87A-213ENST00000569075 SMYD5Q6GMV2 418 aa8.74□□□□□ -1.01
TMEM87A-213ENST00000569075 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
TMEM87A-213ENST00000569075 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
TMEM87A-213ENST00000569075 APLP1P51693 650 aa8.73□□□□□ -1.01
TMEM87A-213ENST00000569075 HIC1Q14526 733 aa8.73□□□□□ -1.01
TMEM87A-213ENST00000569075 TJAP1Q5JTD0 557 aa8.73□□□□□ -1.01
TMEM87A-213ENST00000569075 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
TMEM87A-213ENST00000569075 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
TMEM87A-213ENST00000569075 GNPATO15228 680 aa8.71□□□□□ -1.02
TMEM87A-213ENST00000569075 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
TMEM87A-213ENST00000569075 A0A0G2JS52 829 aa8.7□□□□□ -1.02
TMEM87A-213ENST00000569075 DNAJB2P25686 324 aa8.7□□□□□ -1.02
TMEM87A-213ENST00000569075 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
TMEM87A-213ENST00000569075 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
TMEM87A-213ENST00000569075 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
TMEM87A-213ENST00000569075 KCNC4Q03721 635 aa8.68□□□□□ -1.02
TMEM87A-213ENST00000569075 METTL3Q86U44 580 aaKnown RBP8.68□□□□□ -1.02
TMEM87A-213ENST00000569075 RNF40O75150 1001 aa8.67□□□□□ -1.02
TMEM87A-213ENST00000569075 SLC10A3P09131 477 aa8.67□□□□□ -1.02
TMEM87A-213ENST00000569075 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
TMEM87A-213ENST00000569075 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
TMEM87A-213ENST00000569075 MTRQ99707 1265 aa8.67□□□□□ -1.02
TMEM87A-213ENST00000569075 OATP04181 439 aa8.66□□□□□ -1.02
TMEM87A-213ENST00000569075 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
TMEM87A-213ENST00000569075 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
TMEM87A-213ENST00000569075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.65□□□□□ -1.02
TMEM87A-213ENST00000569075 GPIHBP1Q8IV16 184 aa8.65□□□□□ -1.02
TMEM87A-213ENST00000569075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.64□□□□□ -1.03
TMEM87A-213ENST00000569075 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
TMEM87A-213ENST00000569075 IL21Q9HBE4 155 aa8.62□□□□□ -1.03
TMEM87A-213ENST00000569075 COPS2P61201 443 aa8.6□□□□□ -1.03
TMEM87A-213ENST00000569075 RGS20O76081 388 aa8.59□□□□□ -1.03
TMEM87A-213ENST00000569075 IRF6O14896 467 aa8.58□□□□□ -1.04
TMEM87A-213ENST00000569075 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
TMEM87A-213ENST00000569075 BLOC1S3Q6QNY0 202 aa8.58□□□□□ -1.04
TMEM87A-213ENST00000569075 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
TMEM87A-213ENST00000569075 CFHP08603 1231 aa8.57□□□□□ -1.04
TMEM87A-213ENST00000569075 NECTIN2Q92692 538 aa8.57□□□□□ -1.04
TMEM87A-213ENST00000569075 ZPR1O75312 459 aa8.56□□□□□ -1.04
TMEM87A-213ENST00000569075 PPP1R18Q6NYC8 613 aa8.56□□□□□ -1.04
TMEM87A-213ENST00000569075 PCDHB3Q9Y5E6 796 aa8.56□□□□□ -1.04
TMEM87A-213ENST00000569075 ERCC6Q03468 1493 aa8.55□□□□□ -1.04
TMEM87A-213ENST00000569075 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
TMEM87A-213ENST00000569075 LMOD2Q6P5Q4 547 aa8.54□□□□□ -1.04
TMEM87A-213ENST00000569075 NCAPD3P42695 1498 aa8.54□□□□□ -1.04
TMEM87A-213ENST00000569075 SLC4A3P48751 1232 aa8.53□□□□□ -1.04
TMEM87A-213ENST00000569075 IRX2Q9BZI1 471 aaPredicted RBP8.53□□□□□ -1.04
TMEM87A-213ENST00000569075 MINK1Q8N4C8 1332 aaPredicted RBP8.53□□□□□ -1.04
TMEM87A-213ENST00000569075 ATAD2BQ9ULI0 1458 aa8.53□□□□□ -1.04
TMEM87A-213ENST00000569075 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
TMEM87A-213ENST00000569075 PRR14Q9BWN1 585 aa8.52□□□□□ -1.05
TMEM87A-213ENST00000569075 TLL1O43897 1013 aa8.51□□□□□ -1.05
TMEM87A-213ENST00000569075 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
TMEM87A-213ENST00000569075 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
TMEM87A-213ENST00000569075 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
TMEM87A-213ENST00000569075 GCGRP47871 477 aa8.5□□□□□ -1.05
TMEM87A-213ENST00000569075 SCUBE3Q8IX30 993 aa8.5□□□□□ -1.05
TMEM87A-213ENST00000569075 ZC3H15Q8WU90 426 aaKnown RBP8.5□□□□□ -1.05
TMEM87A-213ENST00000569075 CCDC102AQ96A19 550 aa8.5□□□□□ -1.05
TMEM87A-213ENST00000569075 ZMYND10O75800 440 aa8.49□□□□□ -1.05
TMEM87A-213ENST00000569075 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
TMEM87A-213ENST00000569075 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
TMEM87A-213ENST00000569075 BARGINQ6ZT62 677 aa8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 REPIN1Q9BWE0 567 aaKnown RBP8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 CUX2O14529 1486 aa8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 NESP48681 1621 aa8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 FUT2Q10981 343 aa8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 MORN1Q5T089 497 aa8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 RDH13Q8NBN7 331 aa8.48□□□□□ -1.05
TMEM87A-213ENST00000569075 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
TMEM87A-213ENST00000569075 SMARCA2P51531 1590 aa8.47□□□□□ -1.05
TMEM87A-213ENST00000569075 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 CD46P15529 392 aa8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 RSPH4AQ5TD94 716 aa8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 THAP11Q96EK4 314 aa8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 PRKD2Q9BZL6 878 aa8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 BAZ1BQ9UIG0 1483 aaKnown RBP8.46□□□□□ -1.06
TMEM87A-213ENST00000569075 HMGXB3Q12766 1538 aa8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 NR1I2O75469 434 aa8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 S1PR4O95977 384 aa8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 SLC27A5Q9Y2P5 690 aa8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
TMEM87A-213ENST00000569075 ADH1BP00325 375 aa8.42□□□□□ -1.06
TMEM87A-213ENST00000569075 FAM160A2Q8N612 972 aaPredicted RBP8.42□□□□□ -1.06
TMEM87A-213ENST00000569075 FAM217BQ9NTX9 383 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms