RNA–Protein interactions for RNA: ENST00000569075.5

TMEM87A-213, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,369 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-213ENST00000569075 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
TMEM87A-213ENST00000569075 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
TMEM87A-213ENST00000569075 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.57
TMEM87A-213ENST00000569075 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.55
TMEM87A-213ENST00000569075 FOXD1Q16676 465 aa17.35■□□□□ 0.37
TMEM87A-213ENST00000569075 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
TMEM87A-213ENST00000569075 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
TMEM87A-213ENST00000569075 ADRA2BP18089 450 aa16.42■□□□□ 0.22
TMEM87A-213ENST00000569075 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
TMEM87A-213ENST00000569075 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
TMEM87A-213ENST00000569075 MSH5O43196 834 aa15.98■□□□□ 0.15
TMEM87A-213ENST00000569075 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ -0
TMEM87A-213ENST00000569075 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
TMEM87A-213ENST00000569075 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
TMEM87A-213ENST00000569075 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
TMEM87A-213ENST00000569075 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
TMEM87A-213ENST00000569075 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
TMEM87A-213ENST00000569075 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
TMEM87A-213ENST00000569075 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
TMEM87A-213ENST00000569075 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.14
TMEM87A-213ENST00000569075 KCNA4P22459 653 aa14.21□□□□□ -0.14
TMEM87A-213ENST00000569075 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
TMEM87A-213ENST00000569075 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
TMEM87A-213ENST00000569075 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.19
TMEM87A-213ENST00000569075 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
TMEM87A-213ENST00000569075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.231e-7■■■■□ 23.9
TMEM87A-213ENST00000569075 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
TMEM87A-213ENST00000569075 C1QBPQ07021 282 aaKnown RBP13.51□□□□□ -0.25
TMEM87A-213ENST00000569075 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
TMEM87A-213ENST00000569075 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
TMEM87A-213ENST00000569075 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
TMEM87A-213ENST00000569075 ZBTB22O15209 634 aa13.13□□□□□ -0.31
TMEM87A-213ENST00000569075 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.31
TMEM87A-213ENST00000569075 CAPN15O75808 1086 aa13.05□□□□□ -0.32
TMEM87A-213ENST00000569075 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
TMEM87A-213ENST00000569075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
TMEM87A-213ENST00000569075 DSG3P32926 999 aa12.99□□□□□ -0.33
TMEM87A-213ENST00000569075 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
TMEM87A-213ENST00000569075 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
TMEM87A-213ENST00000569075 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
TMEM87A-213ENST00000569075 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
TMEM87A-213ENST00000569075 APLP2Q06481 763 aa12.88□□□□□ -0.35
TMEM87A-213ENST00000569075 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
TMEM87A-213ENST00000569075 ABCB7O75027 752 aa12.81□□□□□ -0.36
TMEM87A-213ENST00000569075 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
TMEM87A-213ENST00000569075 POLA2Q14181 598 aa12.69□□□□□ -0.38
TMEM87A-213ENST00000569075 POTEHQ6S545 545 aa12.69□□□□□ -0.38
TMEM87A-213ENST00000569075 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
TMEM87A-213ENST00000569075 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
TMEM87A-213ENST00000569075 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
TMEM87A-213ENST00000569075 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
TMEM87A-213ENST00000569075 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
TMEM87A-213ENST00000569075 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
TMEM87A-213ENST00000569075 FBLN2P98095 1184 aa12.15□□□□□ -0.46
TMEM87A-213ENST00000569075 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
TMEM87A-213ENST00000569075 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
TMEM87A-213ENST00000569075 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
TMEM87A-213ENST00000569075 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
TMEM87A-213ENST00000569075 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
TMEM87A-213ENST00000569075 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
TMEM87A-213ENST00000569075 CHRDL2Q6WN34 429 aa11.94□□□□□ -0.5
TMEM87A-213ENST00000569075 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
TMEM87A-213ENST00000569075 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
TMEM87A-213ENST00000569075 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM87A-213ENST00000569075 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
TMEM87A-213ENST00000569075 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM87A-213ENST00000569075 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
TMEM87A-213ENST00000569075 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
TMEM87A-213ENST00000569075 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
TMEM87A-213ENST00000569075 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
TMEM87A-213ENST00000569075 PROM2Q8N271 834 aa11.58□□□□□ -0.56
TMEM87A-213ENST00000569075 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
TMEM87A-213ENST00000569075 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
TMEM87A-213ENST00000569075 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
TMEM87A-213ENST00000569075 EVX2Q03828 476 aa11.47□□□□□ -0.57
TMEM87A-213ENST00000569075 FKBP8Q14318 412 aa11.45□□□□□ -0.58
TMEM87A-213ENST00000569075 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
TMEM87A-213ENST00000569075 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
TMEM87A-213ENST00000569075 HAX1O00165 279 aa11.41□□□□□ -0.58
TMEM87A-213ENST00000569075 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
TMEM87A-213ENST00000569075 C19orf67A6NJJ6 358 aa11.36□□□□□ -0.59
TMEM87A-213ENST00000569075 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
TMEM87A-213ENST00000569075 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
TMEM87A-213ENST00000569075 MIER1Q8N108 512 aa11.16□□□□□ -0.62
TMEM87A-213ENST00000569075 GABBR2O75899 941 aa11.13□□□□□ -0.63
TMEM87A-213ENST00000569075 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMEM87A-213ENST00000569075 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
TMEM87A-213ENST00000569075 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
TMEM87A-213ENST00000569075 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
TMEM87A-213ENST00000569075 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
TMEM87A-213ENST00000569075 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
TMEM87A-213ENST00000569075 NUBP1P53384 320 aa11□□□□□ -0.65
TMEM87A-213ENST00000569075 PHF12Q96QT6 1004 aa11□□□□□ -0.65
TMEM87A-213ENST00000569075 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
TMEM87A-213ENST00000569075 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
TMEM87A-213ENST00000569075 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
TMEM87A-213ENST00000569075 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
TMEM87A-213ENST00000569075 CCDC61Q9Y6R9 512 aa10.95□□□□□ -0.66
TMEM87A-213ENST00000569075 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
TMEM87A-213ENST00000569075 LHX8Q68G74 356 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms