RNA–Protein interactions for RNA: ENST00000568672.1

NAE1-219, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-219ENST00000568672 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
NAE1-219ENST00000568672 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
NAE1-219ENST00000568672 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
NAE1-219ENST00000568672 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
NAE1-219ENST00000568672 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
NAE1-219ENST00000568672 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
NAE1-219ENST00000568672 ZMYM4Q5VZL5 1548 aa12.52□□□□□ -0.4
NAE1-219ENST00000568672 KDM5CP41229 1560 aa12.52□□□□□ -0.4
NAE1-219ENST00000568672 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
NAE1-219ENST00000568672 ZFYVE16Q7Z3T8 1539 aa12.52□□□□□ -0.41
NAE1-219ENST00000568672 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
NAE1-219ENST00000568672 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
NAE1-219ENST00000568672 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
NAE1-219ENST00000568672 PTPN23Q9H3S7 1636 aa12.51□□□□□ -0.41
NAE1-219ENST00000568672 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
NAE1-219ENST00000568672 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
NAE1-219ENST00000568672 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
NAE1-219ENST00000568672 TCOF1Q13428 1488 aaKnown RBP12.5□□□□□ -0.41
NAE1-219ENST00000568672 MLH3Q9UHC1 1453 aa12.5□□□□□ -0.41
NAE1-219ENST00000568672 ARHGEF40Q8TER5 1519 aa12.49□□□□□ -0.41
NAE1-219ENST00000568672 ABCC5O15440 1437 aa12.49□□□□□ -0.41
NAE1-219ENST00000568672 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
NAE1-219ENST00000568672 ATP10AO60312 1499 aa12.48□□□□□ -0.41
NAE1-219ENST00000568672 MLECQ14165 292 aa12.48□□□□□ -0.41
NAE1-219ENST00000568672 TMEM121BQ9BXQ6 578 aaPredicted RBP12.48□□□□□ -0.41
NAE1-219ENST00000568672 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
NAE1-219ENST00000568672 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
NAE1-219ENST00000568672 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
NAE1-219ENST00000568672 CCDC141Q6ZP82 1450 aa12.47□□□□□ -0.41
NAE1-219ENST00000568672 MAGI2Q86UL8 1455 aa12.47□□□□□ -0.41
NAE1-219ENST00000568672 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
NAE1-219ENST00000568672 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
NAE1-219ENST00000568672 PTPRKQ15262 1439 aa12.46□□□□□ -0.41
NAE1-219ENST00000568672 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.42
NAE1-219ENST00000568672 ATP7AQ04656 1500 aa12.46□□□□□ -0.42
NAE1-219ENST00000568672 INO80Q9ULG1 1556 aaPredicted RBP12.45□□□□□ -0.42
NAE1-219ENST00000568672 ITGAEP38570 1179 aa12.45□□□□□ -0.42
NAE1-219ENST00000568672 DAPK1P53355 1430 aa12.45□□□□□ -0.42
NAE1-219ENST00000568672 POTEMA6NI47 508 aa12.44□□□□□ -0.42
NAE1-219ENST00000568672 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
NAE1-219ENST00000568672 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
NAE1-219ENST00000568672 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
NAE1-219ENST00000568672 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
NAE1-219ENST00000568672 C9orf84Q5VXU9 1444 aa12.44□□□□□ -0.42
NAE1-219ENST00000568672 RRP7BPQ9NSQ0 103 aa12.42□□□□□ -0.42
NAE1-219ENST00000568672 RTEL1-TNFRSF6BF6WH68 1400 aa12.42□□□□□ -0.42
NAE1-219ENST00000568672 A2MP01023 1474 aa12.41□□□□□ -0.42
NAE1-219ENST00000568672 DNMT1P26358 1616 aaKnown RBP12.41□□□□□ -0.42
NAE1-219ENST00000568672 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
NAE1-219ENST00000568672 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
NAE1-219ENST00000568672 ST18O60284 1047 aa12.4□□□□□ -0.42
NAE1-219ENST00000568672 SNPHO15079 494 aa12.39□□□□□ -0.43
NAE1-219ENST00000568672 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
NAE1-219ENST00000568672 MAST1Q9Y2H9 1570 aa12.39□□□□□ -0.43
NAE1-219ENST00000568672 PPP1R37O75864 691 aa12.38□□□□□ -0.43
NAE1-219ENST00000568672 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
NAE1-219ENST00000568672 BCORL1Q5H9F3 1711 aa12.37□□□□□ -0.43
NAE1-219ENST00000568672 KIF3BO15066 747 aa12.37□□□□□ -0.43
NAE1-219ENST00000568672 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
NAE1-219ENST00000568672 GGT6Q6P531 493 aa12.37□□□□□ -0.43
NAE1-219ENST00000568672 CROCC2H7BZ55 1655 aa12.37□□□□□ -0.43
NAE1-219ENST00000568672 AGLP35573 1532 aa12.37□□□□□ -0.43
NAE1-219ENST00000568672 ADAMTSL3P82987 1691 aa12.36□□□□□ -0.43
NAE1-219ENST00000568672 PLXNC1O60486 1568 aa12.36□□□□□ -0.43
NAE1-219ENST00000568672 REREQ9P2R6 1566 aa12.36□□□□□ -0.43
NAE1-219ENST00000568672 SHANK2Q9UPX8 1470 aa12.36□□□□□ -0.43
NAE1-219ENST00000568672 KIF15Q9NS87 1388 aa12.36□□□□□ -0.43
NAE1-219ENST00000568672 NCOA1Q15788 1441 aa12.36□□□□□ -0.43
NAE1-219ENST00000568672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.35□□□□□ -0.43
NAE1-219ENST00000568672 CEBPAP49715 358 aaPredicted RBP12.35□□□□□ -0.43
NAE1-219ENST00000568672 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
NAE1-219ENST00000568672 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
NAE1-219ENST00000568672 ANKRD30AQ9BXX3 1397 aa12.34□□□□□ -0.43
NAE1-219ENST00000568672 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
NAE1-219ENST00000568672 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
NAE1-219ENST00000568672 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
NAE1-219ENST00000568672 PTPRMP28827 1452 aa12.31□□□□□ -0.44
NAE1-219ENST00000568672 RIMS1Q86UR5 1692 aaKnown RBP12.31□□□□□ -0.44
NAE1-219ENST00000568672 DUOX2Q9NRD8 1548 aa12.31□□□□□ -0.44
NAE1-219ENST00000568672 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
NAE1-219ENST00000568672 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
NAE1-219ENST00000568672 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
NAE1-219ENST00000568672 MROH1Q8NDA8 1641 aa12.27□□□□□ -0.44
NAE1-219ENST00000568672 FER1L4A9Z1Z3 1794 aa12.26□□□□□ -0.45
NAE1-219ENST00000568672 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
NAE1-219ENST00000568672 ZMYM3Q14202 1370 aa12.26□□□□□ -0.45
NAE1-219ENST00000568672 ERBINQ96RT1 1412 aa12.26□□□□□ -0.45
NAE1-219ENST00000568672 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
NAE1-219ENST00000568672 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
NAE1-219ENST00000568672 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
NAE1-219ENST00000568672 NAIPQ13075 1403 aa12.25□□□□□ -0.45
NAE1-219ENST00000568672 CLTCQ00610 1675 aaKnown RBP12.25□□□□□ -0.45
NAE1-219ENST00000568672 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
NAE1-219ENST00000568672 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
NAE1-219ENST00000568672 RNF17Q9BXT8 1623 aaKnown RBP12.23□□□□□ -0.45
NAE1-219ENST00000568672 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
NAE1-219ENST00000568672 ABCC3O15438 1527 aa12.22□□□□□ -0.45
NAE1-219ENST00000568672 EMP3P54852 163 aa12.22□□□□□ -0.45
NAE1-219ENST00000568672 C3P01024 1663 aa12.21□□□□□ -0.45
NAE1-219ENST00000568672 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms