RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 MAST1Q9Y2H9 1570 aa16.18■□□□□ 0.18
TMEM170A-205ENST00000568559 SLC26A8Q96RN1 970 aa16.18■□□□□ 0.18
TMEM170A-205ENST00000568559 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
TMEM170A-205ENST00000568559 FKBP8Q14318 412 aa16.16■□□□□ 0.18
TMEM170A-205ENST00000568559 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
TMEM170A-205ENST00000568559 ZMYM3Q14202 1370 aa16.14■□□□□ 0.18
TMEM170A-205ENST00000568559 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
TMEM170A-205ENST00000568559 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
TMEM170A-205ENST00000568559 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
TMEM170A-205ENST00000568559 TNRQ92752 1358 aa16.13■□□□□ 0.17
TMEM170A-205ENST00000568559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
TMEM170A-205ENST00000568559 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
TMEM170A-205ENST00000568559 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
TMEM170A-205ENST00000568559 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
TMEM170A-205ENST00000568559 C14orf93Q9H972 538 aaKnown RBP16.11■□□□□ 0.17
TMEM170A-205ENST00000568559 NPATQ14207 1427 aa16.11■□□□□ 0.17
TMEM170A-205ENST00000568559 CFAP65Q6ZU64 1925 aaKnown RBP16.11■□□□□ 0.17
TMEM170A-205ENST00000568559 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
TMEM170A-205ENST00000568559 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
TMEM170A-205ENST00000568559 NEUROD2Q15784 382 aa16.11■□□□□ 0.17
TMEM170A-205ENST00000568559 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
TMEM170A-205ENST00000568559 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
TMEM170A-205ENST00000568559 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
TMEM170A-205ENST00000568559 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
TMEM170A-205ENST00000568559 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
TMEM170A-205ENST00000568559 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
TMEM170A-205ENST00000568559 SLC12A5Q9H2X9 1139 aa16.08■□□□□ 0.16
TMEM170A-205ENST00000568559 RALGAPBQ86X10 1494 aa16.07■□□□□ 0.16
TMEM170A-205ENST00000568559 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
TMEM170A-205ENST00000568559 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
TMEM170A-205ENST00000568559 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
TMEM170A-205ENST00000568559 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
TMEM170A-205ENST00000568559 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
TMEM170A-205ENST00000568559 CDK19Q9BWU1 502 aa16.04■□□□□ 0.16
TMEM170A-205ENST00000568559 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
TMEM170A-205ENST00000568559 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
TMEM170A-205ENST00000568559 MAPK8IP3Q9UPT6 1336 aa16.02■□□□□ 0.15
TMEM170A-205ENST00000568559 UHRF1BP1Q6BDS2 1440 aa16.01■□□□□ 0.15
TMEM170A-205ENST00000568559 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
TMEM170A-205ENST00000568559 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
TMEM170A-205ENST00000568559 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM170A-205ENST00000568559 DIP2BQ9P265 1576 aa16■□□□□ 0.15
TMEM170A-205ENST00000568559 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
TMEM170A-205ENST00000568559 CABP1Q9NZU7 370 aa16■□□□□ 0.15
TMEM170A-205ENST00000568559 GGNBP2Q9H3C7 697 aa15.99■□□□□ 0.15
TMEM170A-205ENST00000568559 DISP3Q9P2K9 1392 aa15.99■□□□□ 0.15
TMEM170A-205ENST00000568559 GLI2P10070 1586 aa15.98■□□□□ 0.15
TMEM170A-205ENST00000568559 PTPRTO14522 1441 aa15.98■□□□□ 0.15
TMEM170A-205ENST00000568559 IQGAP3Q86VI3 1631 aa15.98■□□□□ 0.15
TMEM170A-205ENST00000568559 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
TMEM170A-205ENST00000568559 PRDM15P57071 1507 aaPredicted RBP15.98■□□□□ 0.15
TMEM170A-205ENST00000568559 UNC13BO14795 1591 aa15.97■□□□□ 0.15
TMEM170A-205ENST00000568559 AMOTL2Q9Y2J4 779 aa15.97■□□□□ 0.15
TMEM170A-205ENST00000568559 INO80Q9ULG1 1556 aaPredicted RBP15.97■□□□□ 0.15
TMEM170A-205ENST00000568559 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
TMEM170A-205ENST00000568559 COG3Q96JB2 828 aa15.96■□□□□ 0.15
TMEM170A-205ENST00000568559 ABCC3O15438 1527 aa15.96■□□□□ 0.15
TMEM170A-205ENST00000568559 TESK2Q96S53 571 aa15.96■□□□□ 0.15
TMEM170A-205ENST00000568559 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
TMEM170A-205ENST00000568559 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.14
TMEM170A-205ENST00000568559 TRPM2O94759 1503 aa15.95■□□□□ 0.14
TMEM170A-205ENST00000568559 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
TMEM170A-205ENST00000568559 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
TMEM170A-205ENST00000568559 KIDINS220Q9ULH0 1771 aa15.93■□□□□ 0.14
TMEM170A-205ENST00000568559 TET3O43151 1660 aa15.93■□□□□ 0.14
TMEM170A-205ENST00000568559 EIF2AK4Q9P2K8 1649 aaKnown RBP15.93■□□□□ 0.14
TMEM170A-205ENST00000568559 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
TMEM170A-205ENST00000568559 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
TMEM170A-205ENST00000568559 EFCAB6Q5THR3 1501 aa15.92■□□□□ 0.14
TMEM170A-205ENST00000568559 DIP2CQ9Y2E4 1556 aa15.92■□□□□ 0.14
TMEM170A-205ENST00000568559 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
TMEM170A-205ENST00000568559 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
TMEM170A-205ENST00000568559 PSME1Q06323 249 aa15.91■□□□□ 0.14
TMEM170A-205ENST00000568559 KDM5CP41229 1560 aa15.91■□□□□ 0.14
TMEM170A-205ENST00000568559 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
TMEM170A-205ENST00000568559 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
TMEM170A-205ENST00000568559 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
TMEM170A-205ENST00000568559 ATF3P18847 181 aa15.9■□□□□ 0.14
TMEM170A-205ENST00000568559 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
TMEM170A-205ENST00000568559 AMPHP49418 695 aa15.9■□□□□ 0.14
TMEM170A-205ENST00000568559 ABCA6Q8N139 1617 aa15.89■□□□□ 0.13
TMEM170A-205ENST00000568559 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.89■□□□□ 0.13
TMEM170A-205ENST00000568559 WASLO00401 505 aaPredicted RBP15.89■□□□□ 0.13
TMEM170A-205ENST00000568559 ESCO1Q5FWF5 840 aa15.89■□□□□ 0.13
TMEM170A-205ENST00000568559 MTHFSP49914 203 aa15.88■□□□□ 0.13
TMEM170A-205ENST00000568559 GPRASP1Q5JY77 1395 aa15.88■□□□□ 0.13
TMEM170A-205ENST00000568559 ARHGAP31Q2M1Z3 1444 aa15.88■□□□□ 0.13
TMEM170A-205ENST00000568559 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
TMEM170A-205ENST00000568559 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
TMEM170A-205ENST00000568559 ERVK-7P63135 1459 aa15.88■□□□□ 0.13
TMEM170A-205ENST00000568559 ARXQ96QS3 562 aa15.87■□□□□ 0.13
TMEM170A-205ENST00000568559 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
TMEM170A-205ENST00000568559 NSD3Q9BZ95 1437 aa15.87■□□□□ 0.13
TMEM170A-205ENST00000568559 LTV1Q96GA3 475 aaPredicted RBP15.86■□□□□ 0.13
TMEM170A-205ENST00000568559 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
TMEM170A-205ENST00000568559 LTKP29376 864 aa15.86■□□□□ 0.13
TMEM170A-205ENST00000568559 TMEM2Q9UHN6 1383 aa15.85■□□□□ 0.13
TMEM170A-205ENST00000568559 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
TMEM170A-205ENST00000568559 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
TMEM170A-205ENST00000568559 HSPA2P54652 639 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms