RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 ABCC3O15438 1527 aa12.86□□□□□ -0.35
KLHDC4-220ENST00000568338 UBR1Q8IWV7 1749 aa12.85□□□□□ -0.35
KLHDC4-220ENST00000568338 TMEM94Q12767 1356 aa12.85□□□□□ -0.35
KLHDC4-220ENST00000568338 ABCC5O15440 1437 aa12.85□□□□□ -0.35
KLHDC4-220ENST00000568338 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
KLHDC4-220ENST00000568338 JCADQ9P266 1359 aa12.84□□□□□ -0.35
KLHDC4-220ENST00000568338 SLIT1O75093 1534 aa12.84□□□□□ -0.35
KLHDC4-220ENST00000568338 ARHGAP23Q9P227 1491 aa12.84□□□□□ -0.35
KLHDC4-220ENST00000568338 LTKP29376 864 aa12.83□□□□□ -0.36
KLHDC4-220ENST00000568338 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
KLHDC4-220ENST00000568338 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
KLHDC4-220ENST00000568338 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
KLHDC4-220ENST00000568338 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.36
KLHDC4-220ENST00000568338 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
KLHDC4-220ENST00000568338 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 TSPY4P0CV99 314 aa12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 TSPY10P0CW01 314 aa12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 MSH6P52701 1360 aa12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
KLHDC4-220ENST00000568338 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
KLHDC4-220ENST00000568338 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
KLHDC4-220ENST00000568338 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
KLHDC4-220ENST00000568338 EIF2AK4Q9P2K8 1649 aaKnown RBP12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 KCNA6P17658 529 aa12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 RBM33Q96EV2 1170 aaKnown RBP12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 SETD5Q9C0A6 1442 aa12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
KLHDC4-220ENST00000568338 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
KLHDC4-220ENST00000568338 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
KLHDC4-220ENST00000568338 LRP6O75581 1613 aa12.77□□□□□ -0.37
KLHDC4-220ENST00000568338 RXRBP28702 533 aa12.76□□□□□ -0.37
KLHDC4-220ENST00000568338 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
KLHDC4-220ENST00000568338 NAIPQ13075 1403 aa12.76□□□□□ -0.37
KLHDC4-220ENST00000568338 CEP152O94986 1710 aa12.75□□□□□ -0.37
KLHDC4-220ENST00000568338 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
KLHDC4-220ENST00000568338 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
KLHDC4-220ENST00000568338 SLC26A8Q96RN1 970 aa12.75□□□□□ -0.37
KLHDC4-220ENST00000568338 RAB3GAP2Q9H2M9 1393 aa12.75□□□□□ -0.37
KLHDC4-220ENST00000568338 PIK3C2BO00750 1634 aa12.74□□□□□ -0.37
KLHDC4-220ENST00000568338 MROH1Q8NDA8 1641 aa12.74□□□□□ -0.37
KLHDC4-220ENST00000568338 NWD1Q149M9 1564 aa12.73□□□□□ -0.37
KLHDC4-220ENST00000568338 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
KLHDC4-220ENST00000568338 CDK12Q9NYV4 1490 aaPredicted RBP12.73□□□□□ -0.37
KLHDC4-220ENST00000568338 BCANQ96GW7 911 aa12.73□□□□□ -0.37
KLHDC4-220ENST00000568338 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
KLHDC4-220ENST00000568338 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
KLHDC4-220ENST00000568338 KIF15Q9NS87 1388 aa12.71□□□□□ -0.37
KLHDC4-220ENST00000568338 HRCP23327 699 aa12.71□□□□□ -0.37
KLHDC4-220ENST00000568338 TET3O43151 1660 aa12.7□□□□□ -0.38
KLHDC4-220ENST00000568338 KDM5AP29375 1690 aaKnown RBP12.7□□□□□ -0.38
KLHDC4-220ENST00000568338 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
KLHDC4-220ENST00000568338 DUOX2Q9NRD8 1548 aa12.69□□□□□ -0.38
KLHDC4-220ENST00000568338 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
KLHDC4-220ENST00000568338 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
KLHDC4-220ENST00000568338 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
KLHDC4-220ENST00000568338 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
KLHDC4-220ENST00000568338 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
KLHDC4-220ENST00000568338 ANKRD50Q9ULJ7 1429 aa12.68□□□□□ -0.38
KLHDC4-220ENST00000568338 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
KLHDC4-220ENST00000568338 ERBINQ96RT1 1412 aa12.67□□□□□ -0.38
KLHDC4-220ENST00000568338 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
KLHDC4-220ENST00000568338 KANK1Q14678 1352 aa12.66□□□□□ -0.38
KLHDC4-220ENST00000568338 AFF2P51816 1311 aa12.65□□□□□ -0.38
KLHDC4-220ENST00000568338 RGS12O14924 1447 aa12.65□□□□□ -0.38
KLHDC4-220ENST00000568338 IDI1Q13907 227 aa12.65□□□□□ -0.38
KLHDC4-220ENST00000568338 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
KLHDC4-220ENST00000568338 ADGRB3O60242 1522 aa12.65□□□□□ -0.38
KLHDC4-220ENST00000568338 NCOA3Q9Y6Q9 1424 aa12.64□□□□□ -0.39
KLHDC4-220ENST00000568338 ATF3P18847 181 aa12.64□□□□□ -0.39
KLHDC4-220ENST00000568338 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
KLHDC4-220ENST00000568338 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
KLHDC4-220ENST00000568338 DHX57Q6P158 1386 aaKnown RBP12.64□□□□□ -0.39
KLHDC4-220ENST00000568338 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
KLHDC4-220ENST00000568338 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
KLHDC4-220ENST00000568338 UNC13BO14795 1591 aa12.63□□□□□ -0.39
KLHDC4-220ENST00000568338 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
KLHDC4-220ENST00000568338 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
KLHDC4-220ENST00000568338 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
KLHDC4-220ENST00000568338 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
KLHDC4-220ENST00000568338 ATAD2Q6PL18 1390 aa12.61□□□□□ -0.39
KLHDC4-220ENST00000568338 PLEKHG1Q9ULL1 1385 aa12.61□□□□□ -0.39
KLHDC4-220ENST00000568338 RBM6P78332 1123 aaKnown RBP12.61□□□□□ -0.39
KLHDC4-220ENST00000568338 DIP2AQ14689 1571 aa12.6□□□□□ -0.39
KLHDC4-220ENST00000568338 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
KLHDC4-220ENST00000568338 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
KLHDC4-220ENST00000568338 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
KLHDC4-220ENST00000568338 HDGFP51858 240 aaKnown RBP12.59□□□□□ -0.39
KLHDC4-220ENST00000568338 NGLY1Q96IV0 654 aa12.59□□□□□ -0.39
KLHDC4-220ENST00000568338 CLSPNQ9HAW4 1339 aa12.59□□□□□ -0.39
KLHDC4-220ENST00000568338 LMTK2Q8IWU2 1503 aa12.58□□□□□ -0.4
KLHDC4-220ENST00000568338 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
KLHDC4-220ENST00000568338 SLC52A1Q9NWF4 448 aa12.58□□□□□ -0.4
KLHDC4-220ENST00000568338 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
KLHDC4-220ENST00000568338 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms