RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 SLC26A8Q96RN1 970 aa34.1■■■■□ 3.05
SPG7-217ENST00000568151 PLEKHG1Q9ULL1 1385 aa34.1■■■■□ 3.05
SPG7-217ENST00000568151 HDGFP51858 240 aaKnown RBP34.09■■■■□ 3.05
SPG7-217ENST00000568151 LRRC7Q96NW7 1537 aa34.09■■■■□ 3.05
SPG7-217ENST00000568151 UBAP1LF5GYI3 381 aa34.08■■■■□ 3.05
SPG7-217ENST00000568151 PPP1R15AO75807 674 aaPredicted RBP34.07■■■■□ 3.04
SPG7-217ENST00000568151 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.06■■■■□ 3.04
SPG7-217ENST00000568151 NUTM2DQ5VT03 806 aaPredicted RBP34.05■■■■□ 3.04
SPG7-217ENST00000568151 SENP3Q9H4L4 574 aaPredicted RBP34.05■■■■□ 3.04
SPG7-217ENST00000568151 SETD5Q9C0A6 1442 aa34.04■■■■□ 3.04
SPG7-217ENST00000568151 BCANQ96GW7 911 aa34.04■■■■□ 3.04
SPG7-217ENST00000568151 KCNA6P17658 529 aa33.99■■■■□ 3.03
SPG7-217ENST00000568151 KIF1BO60333 1816 aa33.99■■■■□ 3.03
SPG7-217ENST00000568151 FOXD1Q16676 465 aa33.98■■■■□ 3.03
SPG7-217ENST00000568151 MPHOSPH9Q99550 1183 aa33.97■■■■□ 3.03
SPG7-217ENST00000568151 XIRP1Q702N8 1843 aaKnown RBP33.97■■■■□ 3.03
SPG7-217ENST00000568151 ADAMTS13Q76LX8 1427 aa33.96■■■■□ 3.03
SPG7-217ENST00000568151 NWD1Q149M9 1564 aa33.96■■■■□ 3.03
SPG7-217ENST00000568151 ALKQ9UM73 1620 aa33.94■■■■□ 3.02
SPG7-217ENST00000568151 ZNF326Q5BKZ1 582 aaKnown RBP33.94■■■■□ 3.02
SPG7-217ENST00000568151 TBX22Q9Y458 520 aa33.94■■■■□ 3.02
SPG7-217ENST00000568151 RAB3GAP2Q9H2M9 1393 aa33.94■■■■□ 3.02
SPG7-217ENST00000568151 TOM1O60784 492 aa33.93■■■■□ 3.02
SPG7-217ENST00000568151 CHD2O14647 1828 aaKnown RBP33.92■■■■□ 3.02
SPG7-217ENST00000568151 NEXMIFQ5QGS0 1516 aa33.91■■■■□ 3.02
SPG7-217ENST00000568151 ACIN1Q9UKV3 1341 aaKnown RBP33.91■■■■□ 3.02
SPG7-217ENST00000568151 DIP2AQ14689 1571 aa33.9■■■■□ 3.02
SPG7-217ENST00000568151 NKTRP30414 1462 aaKnown RBP33.88■■■■□ 3.01
SPG7-217ENST00000568151 NRXN3Q9Y4C0 1643 aa33.88■■■■□ 3.01
SPG7-217ENST00000568151 TMEM94Q12767 1356 aa33.86■■■■□ 3.01
SPG7-217ENST00000568151 SETBP1Q9Y6X0 1596 aa33.85■■■■□ 3.01
SPG7-217ENST00000568151 PIP4K2BP78356 416 aa33.85■■■■□ 3.01
SPG7-217ENST00000568151 PROSER2Q86WR7 435 aaPredicted RBP33.84■■■■□ 3.01
SPG7-217ENST00000568151 RBM33Q96EV2 1170 aaKnown RBP33.82■■■■□ 3
SPG7-217ENST00000568151 SCAF1Q9H7N4 1312 aaKnown RBP33.81■■■■□ 3
SPG7-217ENST00000568151 PIK3R4Q99570 1358 aa33.81■■■■□ 3
SPG7-217ENST00000568151 CCDC144AA2RUR9 1427 aa33.8■■■■□ 3
SPG7-217ENST00000568151 PTPRUQ92729 1446 aa33.76■■■□□ 2.99
SPG7-217ENST00000568151 RPGRIP1LQ68CZ1 1315 aa33.76■■■□□ 2.99
SPG7-217ENST00000568151 PPLO60437 1756 aa33.75■■■□□ 2.99
SPG7-217ENST00000568151 SPATA31E1Q6ZUB1 1445 aa33.74■■■□□ 2.99
SPG7-217ENST00000568151 HRCP23327 699 aa33.72■■■□□ 2.99
SPG7-217ENST00000568151 VGFO15240 615 aaPredicted RBP33.71■■■□□ 2.99
SPG7-217ENST00000568151 HSPA1LP34931 641 aa33.71■■■□□ 2.99
SPG7-217ENST00000568151 METP08581 1390 aa33.71■■■□□ 2.99
SPG7-217ENST00000568151 AMOTL2Q9Y2J4 779 aa33.7■■■□□ 2.99
SPG7-217ENST00000568151 XRN1Q8IZH2 1706 aaKnown RBP33.69■■■□□ 2.98
SPG7-217ENST00000568151 SETD1AO15047 1707 aaKnown RBP33.65■■■□□ 2.98
SPG7-217ENST00000568151 RGL3Q3MIN7 710 aa33.65■■■□□ 2.98
SPG7-217ENST00000568151 NCOA3Q9Y6Q9 1424 aa33.64■■■□□ 2.98
SPG7-217ENST00000568151 MSH6P52701 1360 aa33.64■■■□□ 2.98
SPG7-217ENST00000568151 IFT172Q9UG01 1749 aa33.64■■■□□ 2.98
SPG7-217ENST00000568151 ANKRD30BQ9BXX2 1392 aa33.6■■■□□ 2.97
SPG7-217ENST00000568151 ADGRF5Q8IZF2 1346 aa33.58■■■□□ 2.97
SPG7-217ENST00000568151 FAM135BQ49AJ0 1406 aa33.57■■■□□ 2.96
SPG7-217ENST00000568151 C14orf37Q86TY3 774 aa33.56■■■□□ 2.96
SPG7-217ENST00000568151 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.55■■■□□ 2.96
SPG7-217ENST00000568151 ROBO1Q9Y6N7 1651 aa33.52■■■□□ 2.96
SPG7-217ENST00000568151 C19orf44Q9H6X5 657 aa33.52■■■□□ 2.96
SPG7-217ENST00000568151 SLAIN2Q9P270 581 aa33.51■■■□□ 2.95
SPG7-217ENST00000568151 PIK3C2GO75747 1445 aa33.47■■■□□ 2.95
SPG7-217ENST00000568151 PRAG1Q86YV5 1406 aa33.46■■■□□ 2.95
SPG7-217ENST00000568151 PTCH1Q13635 1447 aa33.45■■■□□ 2.95
SPG7-217ENST00000568151 CADPS2Q86UW7 1296 aa33.45■■■□□ 2.95
SPG7-217ENST00000568151 ATF3P18847 181 aa33.44■■■□□ 2.94
SPG7-217ENST00000568151 ROBO2Q9HCK4 1378 aa33.44■■■□□ 2.94
SPG7-217ENST00000568151 DISP3Q9P2K9 1392 aa33.43■■■□□ 2.94
SPG7-217ENST00000568151 DCCP43146 1447 aa33.42■■■□□ 2.94
SPG7-217ENST00000568151 MYOM2P54296 1465 aa33.42■■■□□ 2.94
SPG7-217ENST00000568151 NRXN1Q9ULB1 1477 aa33.42■■■□□ 2.94
SPG7-217ENST00000568151 ADGRL3Q9HAR2 1447 aa33.41■■■□□ 2.94
SPG7-217ENST00000568151 NALCNQ8IZF0 1738 aa33.41■■■□□ 2.94
SPG7-217ENST00000568151 ASXL1Q8IXJ9 1541 aa33.4■■■□□ 2.94
SPG7-217ENST00000568151 MED1Q15648 1581 aaPredicted RBP33.34■■■□□ 2.93
SPG7-217ENST00000568151 TMEM132EQ6IEE7 984 aa33.34■■■□□ 2.93
SPG7-217ENST00000568151 C14orf93Q9H972 538 aaKnown RBP33.34■■■□□ 2.93
SPG7-217ENST00000568151 MST1RQ04912 1400 aa33.33■■■□□ 2.93
SPG7-217ENST00000568151 LRPPRCP42704 1394 aaKnown RBP33.33■■■□□ 2.93
SPG7-217ENST00000568151 TECPR2O15040 1411 aa33.32■■■□□ 2.92
SPG7-217ENST00000568151 PHLPP1O60346 1717 aa33.31■■■□□ 2.92
SPG7-217ENST00000568151 STK26Q9P289 416 aa33.3■■■□□ 2.92
SPG7-217ENST00000568151 LAMC1P11047 1609 aa33.3■■■□□ 2.92
SPG7-217ENST00000568151 KNDC1Q76NI1 1749 aa33.29■■■□□ 2.92
SPG7-217ENST00000568151 CFAP70Q5T0N1 1121 aa33.29■■■□□ 2.92
SPG7-217ENST00000568151 ABCC11Q96J66 1382 aa33.28■■■□□ 2.92
SPG7-217ENST00000568151 YTHDC2Q9H6S0 1430 aaKnown RBP33.28■■■□□ 2.92
SPG7-217ENST00000568151 DHX57Q6P158 1386 aaKnown RBP33.27■■■□□ 2.92
SPG7-217ENST00000568151 BRINP3Q76B58 766 aa33.27■■■□□ 2.92
SPG7-217ENST00000568151 DCAF11Q8TEB1 546 aa33.26■■■□□ 2.91
SPG7-217ENST00000568151 COL16A1Q07092 1604 aaPredicted RBP33.24■■■□□ 2.91
SPG7-217ENST00000568151 AHDC1Q5TGY3 1603 aaPredicted RBP33.24■■■□□ 2.91
SPG7-217ENST00000568151 KDM2AQ9Y2K7 1162 aa33.24■■■□□ 2.91
SPG7-217ENST00000568151 WAPLQ7Z5K2 1190 aa33.22■■■□□ 2.91
SPG7-217ENST00000568151 PLEKHH1Q9ULM0 1364 aa33.21■■■□□ 2.91
SPG7-217ENST00000568151 STAC3Q96MF2 364 aa33.19■■■□□ 2.9
SPG7-217ENST00000568151 C1orf167Q5SNV9 1468 aa33.18■■■□□ 2.9
SPG7-217ENST00000568151 ADGRB1O14514 1584 aa33.17■■■□□ 2.9
SPG7-217ENST00000568151 ILDR2Q71H61 639 aa33.17■■■□□ 2.9
SPG7-217ENST00000568151 CDC42BPGQ6DT37 1551 aa33.17■■■□□ 2.9
SPG7-217ENST00000568151 NHSL1Q5SYE7 1610 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms