RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
HDGFL3-205ENST00000568129 CLTCL1P53675 1640 aa12.3□□□□□ -0.44
HDGFL3-205ENST00000568129 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
HDGFL3-205ENST00000568129 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
HDGFL3-205ENST00000568129 HRCP23327 699 aa12.29□□□□□ -0.44
HDGFL3-205ENST00000568129 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDGFL3-205ENST00000568129 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
HDGFL3-205ENST00000568129 NWD1Q149M9 1564 aa12.27□□□□□ -0.44
HDGFL3-205ENST00000568129 TRIM52Q96A61 297 aa12.27□□□□□ -0.45
HDGFL3-205ENST00000568129 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
HDGFL3-205ENST00000568129 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
HDGFL3-205ENST00000568129 KCNA6P17658 529 aa12.26□□□□□ -0.45
HDGFL3-205ENST00000568129 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
HDGFL3-205ENST00000568129 ALKQ9UM73 1620 aa12.26□□□□□ -0.45
HDGFL3-205ENST00000568129 ADAMTS13Q76LX8 1427 aa12.25□□□□□ -0.45
HDGFL3-205ENST00000568129 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
HDGFL3-205ENST00000568129 DIP2AQ14689 1571 aa12.25□□□□□ -0.45
HDGFL3-205ENST00000568129 NRXN3Q9Y4C0 1643 aa12.25□□□□□ -0.45
HDGFL3-205ENST00000568129 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
HDGFL3-205ENST00000568129 SETBP1Q9Y6X0 1596 aa12.24□□□□□ -0.45
HDGFL3-205ENST00000568129 PPLO60437 1756 aa12.23□□□□□ -0.45
HDGFL3-205ENST00000568129 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
HDGFL3-205ENST00000568129 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
HDGFL3-205ENST00000568129 RPGRIP1LQ68CZ1 1315 aa12.22□□□□□ -0.45
HDGFL3-205ENST00000568129 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.45
HDGFL3-205ENST00000568129 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
HDGFL3-205ENST00000568129 NCOA3Q9Y6Q9 1424 aa12.2□□□□□ -0.46
HDGFL3-205ENST00000568129 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
HDGFL3-205ENST00000568129 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
HDGFL3-205ENST00000568129 TOM1O60784 492 aa12.2□□□□□ -0.46
HDGFL3-205ENST00000568129 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
HDGFL3-205ENST00000568129 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
HDGFL3-205ENST00000568129 PPP1R15AO75807 674 aaPredicted RBP12.19□□□□□ -0.46
HDGFL3-205ENST00000568129 FOXD1Q16676 465 aa12.18□□□□□ -0.46
HDGFL3-205ENST00000568129 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-205ENST00000568129 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
HDGFL3-205ENST00000568129 PTPRUQ92729 1446 aa12.17□□□□□ -0.46
HDGFL3-205ENST00000568129 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
HDGFL3-205ENST00000568129 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
HDGFL3-205ENST00000568129 CCDC144AA2RUR9 1427 aa12.16□□□□□ -0.46
HDGFL3-205ENST00000568129 TMEM94Q12767 1356 aa12.16□□□□□ -0.46
HDGFL3-205ENST00000568129 ANKRD30BQ9BXX2 1392 aa12.16□□□□□ -0.46
HDGFL3-205ENST00000568129 PRAG1Q86YV5 1406 aa12.15□□□□□ -0.46
HDGFL3-205ENST00000568129 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-205ENST00000568129 BCANQ96GW7 911 aa12.14□□□□□ -0.47
HDGFL3-205ENST00000568129 METP08581 1390 aa12.13□□□□□ -0.47
HDGFL3-205ENST00000568129 FAM135BQ49AJ0 1406 aa12.12□□□□□ -0.47
HDGFL3-205ENST00000568129 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
HDGFL3-205ENST00000568129 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
HDGFL3-205ENST00000568129 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
HDGFL3-205ENST00000568129 C19orf44Q9H6X5 657 aa12.09□□□□□ -0.47
HDGFL3-205ENST00000568129 PIK3C2GO75747 1445 aa12.09□□□□□ -0.47
HDGFL3-205ENST00000568129 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
HDGFL3-205ENST00000568129 MYOM2P54296 1465 aa12.08□□□□□ -0.47
HDGFL3-205ENST00000568129 MSH6P52701 1360 aa12.08□□□□□ -0.48
HDGFL3-205ENST00000568129 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
HDGFL3-205ENST00000568129 DCCP43146 1447 aa12.08□□□□□ -0.48
HDGFL3-205ENST00000568129 HSPA1LP34931 641 aa12.07□□□□□ -0.48
HDGFL3-205ENST00000568129 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
HDGFL3-205ENST00000568129 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
HDGFL3-205ENST00000568129 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
HDGFL3-205ENST00000568129 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
HDGFL3-205ENST00000568129 SENP3Q9H4L4 574 aaPredicted RBP12.07□□□□□ -0.48
HDGFL3-205ENST00000568129 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
HDGFL3-205ENST00000568129 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
HDGFL3-205ENST00000568129 TECPR2O15040 1411 aa12.06□□□□□ -0.48
HDGFL3-205ENST00000568129 SLAIN2Q9P270 581 aa12.06□□□□□ -0.48
HDGFL3-205ENST00000568129 LAMC1P11047 1609 aa12.05□□□□□ -0.48
HDGFL3-205ENST00000568129 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
HDGFL3-205ENST00000568129 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
HDGFL3-205ENST00000568129 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
HDGFL3-205ENST00000568129 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
HDGFL3-205ENST00000568129 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
HDGFL3-205ENST00000568129 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
HDGFL3-205ENST00000568129 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
HDGFL3-205ENST00000568129 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
HDGFL3-205ENST00000568129 LRPPRCP42704 1394 aaKnown RBP12.02□□□□□ -0.49
HDGFL3-205ENST00000568129 DHX57Q6P158 1386 aaKnown RBP12.02□□□□□ -0.49
HDGFL3-205ENST00000568129 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-205ENST00000568129 ATF3P18847 181 aa12□□□□□ -0.49
HDGFL3-205ENST00000568129 MST1RQ04912 1400 aa12□□□□□ -0.49
HDGFL3-205ENST00000568129 ADGRB1O14514 1584 aa12□□□□□ -0.49
HDGFL3-205ENST00000568129 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
HDGFL3-205ENST00000568129 PHLPP1O60346 1717 aa12□□□□□ -0.49
HDGFL3-205ENST00000568129 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
HDGFL3-205ENST00000568129 KIAA1210Q9ULL0 1709 aa11.99□□□□□ -0.49
HDGFL3-205ENST00000568129 COL16A1Q07092 1604 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-205ENST00000568129 NHSL1Q5SYE7 1610 aa11.98□□□□□ -0.49
HDGFL3-205ENST00000568129 DLC1Q96QB1 1528 aa11.98□□□□□ -0.49
HDGFL3-205ENST00000568129 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-205ENST00000568129 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
HDGFL3-205ENST00000568129 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
HDGFL3-205ENST00000568129 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
HDGFL3-205ENST00000568129 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
HDGFL3-205ENST00000568129 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
HDGFL3-205ENST00000568129 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.49
HDGFL3-205ENST00000568129 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
HDGFL3-205ENST00000568129 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
HDGFL3-205ENST00000568129 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
HDGFL3-205ENST00000568129 SHPRHQ149N8 1683 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms