RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 BCANQ96GW7 911 aa22.14■■□□□ 1.13
SMG1-213ENST00000567737 NPM3O75607 178 aaKnown RBP22.13■■□□□ 1.13
SMG1-213ENST00000567737 KDM5AP29375 1690 aaKnown RBP22.11■■□□□ 1.13
SMG1-213ENST00000567737 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
SMG1-213ENST00000567737 IDI1Q13907 227 aa22.09■■□□□ 1.13
SMG1-213ENST00000567737 SHPRHQ149N8 1683 aa22.08■■□□□ 1.13
SMG1-213ENST00000567737 SRCAPQ6ZRS2 3230 aa22.08■■□□□ 1.13
SMG1-213ENST00000567737 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
SMG1-213ENST00000567737 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
SMG1-213ENST00000567737 C14orf37Q86TY3 774 aa22.06■■□□□ 1.12
SMG1-213ENST00000567737 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
SMG1-213ENST00000567737 AHDC1Q5TGY3 1603 aaPredicted RBP22.06■■□□□ 1.12
SMG1-213ENST00000567737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMG1-213ENST00000567737 AFF2P51816 1311 aa22.05■■□□□ 1.12
SMG1-213ENST00000567737 NCOA3Q9Y6Q9 1424 aa22.04■■□□□ 1.12
SMG1-213ENST00000567737 KANK1Q14678 1352 aa22.03■■□□□ 1.12
SMG1-213ENST00000567737 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
SMG1-213ENST00000567737 RGS12O14924 1447 aa22.01■■□□□ 1.11
SMG1-213ENST00000567737 ERBINQ96RT1 1412 aa22.01■■□□□ 1.11
SMG1-213ENST00000567737 NUTM2DQ5VT03 806 aaPredicted RBP22.01■■□□□ 1.11
SMG1-213ENST00000567737 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
SMG1-213ENST00000567737 ATF3P18847 181 aa22■■□□□ 1.11
SMG1-213ENST00000567737 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
SMG1-213ENST00000567737 RBM6P78332 1123 aaKnown RBP21.99■■□□□ 1.11
SMG1-213ENST00000567737 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
SMG1-213ENST00000567737 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
SMG1-213ENST00000567737 ZRANB1Q9UGI0 708 aa21.97■■□□□ 1.11
SMG1-213ENST00000567737 PLEKHG1Q9ULL1 1385 aa21.97■■□□□ 1.11
SMG1-213ENST00000567737 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
SMG1-213ENST00000567737 QTRT2Q9H974 415 aaKnown RBP21.96■■□□□ 1.11
SMG1-213ENST00000567737 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
SMG1-213ENST00000567737 RRP7BPQ9NSQ0 103 aa21.95■■□□□ 1.1
SMG1-213ENST00000567737 SLC52A1Q9NWF4 448 aa21.95■■□□□ 1.1
SMG1-213ENST00000567737 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
SMG1-213ENST00000567737 HDGFP51858 240 aaKnown RBP21.94■■□□□ 1.1
SMG1-213ENST00000567737 NOS1P29475 1434 aa21.93■■□□□ 1.1
SMG1-213ENST00000567737 ATAD2Q6PL18 1390 aa21.93■■□□□ 1.1
SMG1-213ENST00000567737 BRINP3Q76B58 766 aa21.93■■□□□ 1.1
SMG1-213ENST00000567737 LMTK2Q8IWU2 1503 aa21.93■■□□□ 1.1
SMG1-213ENST00000567737 C8orf37Q96NL8 207 aa21.93■■□□□ 1.1
SMG1-213ENST00000567737 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.93■■□□□ 1.1
SMG1-213ENST00000567737 TBX22Q9Y458 520 aa21.92■■□□□ 1.1
SMG1-213ENST00000567737 NGLY1Q96IV0 654 aa21.9■■□□□ 1.1
SMG1-213ENST00000567737 ZFYVE9O95405 1425 aa21.89■■□□□ 1.1
SMG1-213ENST00000567737 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.1
SMG1-213ENST00000567737 RNF216Q9NWF9 866 aaPredicted RBP21.89■■□□□ 1.09
SMG1-213ENST00000567737 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.09
SMG1-213ENST00000567737 LRRC59Q96AG4 307 aaKnown RBP21.87■■□□□ 1.09
SMG1-213ENST00000567737 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
SMG1-213ENST00000567737 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
SMG1-213ENST00000567737 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
SMG1-213ENST00000567737 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
SMG1-213ENST00000567737 ABCC5O15440 1437 aa21.82■■□□□ 1.08
SMG1-213ENST00000567737 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
SMG1-213ENST00000567737 DCCP43146 1447 aa21.81■■□□□ 1.08
SMG1-213ENST00000567737 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
SMG1-213ENST00000567737 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
SMG1-213ENST00000567737 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
SMG1-213ENST00000567737 ADAMTS2O95450 1211 aa21.78■■□□□ 1.08
SMG1-213ENST00000567737 AMOTL2Q9Y2J4 779 aa21.78■■□□□ 1.08
SMG1-213ENST00000567737 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
SMG1-213ENST00000567737 RPRD2Q5VT52 1461 aaKnown RBP21.77■■□□□ 1.08
SMG1-213ENST00000567737 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
SMG1-213ENST00000567737 CCDC125Q86Z20 511 aa21.77■■□□□ 1.08
SMG1-213ENST00000567737 MYO5BQ9ULV0 1848 aa21.77■■□□□ 1.08
SMG1-213ENST00000567737 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
SMG1-213ENST00000567737 HOXD11P31277 338 aaPredicted RBP21.76■■□□□ 1.07
SMG1-213ENST00000567737 MST1RQ04912 1400 aa21.76■■□□□ 1.07
SMG1-213ENST00000567737 USP21Q9UK80 565 aa21.76■■□□□ 1.07
SMG1-213ENST00000567737 TRPC5Q9UL62 973 aaPredicted RBP21.76■■□□□ 1.07
SMG1-213ENST00000567737 TMEM131LA2VDJ0 1609 aa21.76■■□□□ 1.07
SMG1-213ENST00000567737 TRPM2O94759 1503 aa21.75■■□□□ 1.07
SMG1-213ENST00000567737 DAPK1P53355 1430 aa21.75■■□□□ 1.07
SMG1-213ENST00000567737 KANK4Q5T7N3 995 aaPredicted RBP21.74■■□□□ 1.07
SMG1-213ENST00000567737 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
SMG1-213ENST00000567737 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
SMG1-213ENST00000567737 PTPRUQ92729 1446 aa21.71■■□□□ 1.07
SMG1-213ENST00000567737 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
SMG1-213ENST00000567737 ATRNO75882 1429 aa21.66■■□□□ 1.06
SMG1-213ENST00000567737 VPS8Q8N3P4 1428 aa21.66■■□□□ 1.06
SMG1-213ENST00000567737 FNBP4Q8N3X1 1017 aaPredicted RBP21.66■■□□□ 1.06
SMG1-213ENST00000567737 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
SMG1-213ENST00000567737 EP400Q96L91 3159 aa21.64■■□□□ 1.05
SMG1-213ENST00000567737 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
SMG1-213ENST00000567737 XRN1Q8IZH2 1706 aaKnown RBP21.62■■□□□ 1.05
SMG1-213ENST00000567737 UNC13BO14795 1591 aa21.61■■□□□ 1.05
SMG1-213ENST00000567737 ADGRL3Q9HAR2 1447 aa21.61■■□□□ 1.05
SMG1-213ENST00000567737 BLMP54132 1417 aaPredicted RBP21.59■■□□□ 1.05
SMG1-213ENST00000567737 LRP5O75197 1615 aa21.58■■□□□ 1.04
SMG1-213ENST00000567737 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
SMG1-213ENST00000567737 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
SMG1-213ENST00000567737 C1orf167Q5SNV9 1468 aa21.57■■□□□ 1.04
SMG1-213ENST00000567737 ADGRL2O95490 1459 aa21.56■■□□□ 1.04
SMG1-213ENST00000567737 SF3B2Q13435 895 aaKnown RBP21.55■■□□□ 1.04
SMG1-213ENST00000567737 GJD4Q96KN9 370 aaPredicted RBP21.55■■□□□ 1.04
SMG1-213ENST00000567737 DEFB132Q7Z7B7 95 aa21.54■■□□□ 1.04
SMG1-213ENST00000567737 LAMC1P11047 1609 aa21.54■■□□□ 1.04
SMG1-213ENST00000567737 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
SMG1-213ENST00000567737 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.04
SMG1-213ENST00000567737 METP08581 1390 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms