RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	NEURL4	Q96JN8	1562 aa		13.47	□□□□□ -0.25
FANCA-223	ENST00000567284	NEXMIF	Q5QGS0	1516 aa		13.46	□□□□□ -0.25
FANCA-223	ENST00000567284	RIMS2	Q9UQ26	1411 aa		13.46	□□□□□ -0.26
FANCA-223	ENST00000567284	PPP1R15A	O75807	674 aa	Predicted RBP	13.44	□□□□□ -0.26
FANCA-223	ENST00000567284	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.44	□□□□□ -0.26
FANCA-223	ENST00000567284	POLR1A	O95602	1720 aa	Predicted RBP	13.44	□□□□□ -0.26
FANCA-223	ENST00000567284	RPGRIP1L	Q68CZ1	1315 aa		13.43	□□□□□ -0.26
FANCA-223	ENST00000567284	BCAN	Q96GW7	911 aa		13.43	□□□□□ -0.26
FANCA-223	ENST00000567284	TIMELESS	Q9UNS1	1208 aa		13.43	□□□□□ -0.26
FANCA-223	ENST00000567284	ADGRF5	Q8IZF2	1346 aa		13.42	□□□□□ -0.26
FANCA-223	ENST00000567284	HSPA2	P54652	639 aa		13.42	□□□□□ -0.26
FANCA-223	ENST00000567284	TXNDC2	Q86VQ3	553 aa		13.42	□□□□□ -0.26
FANCA-223	ENST00000567284	TMEM2	Q9UHN6	1383 aa		13.42	□□□□□ -0.26
FANCA-223	ENST00000567284	NBPF8	Q3BBV2	869 aa		13.41	□□□□□ -0.26
FANCA-223	ENST00000567284	EID1	Q9Y6B2	187 aa		13.41	□□□□□ -0.26
FANCA-223	ENST00000567284	IQGAP1	P46940	1657 aa		13.4	□□□□□ -0.26
FANCA-223	ENST00000567284	VGF	O15240	615 aa	Predicted RBP	13.4	□□□□□ -0.26
FANCA-223	ENST00000567284	HDGF	P51858	240 aa	Known RBP	13.4	□□□□□ -0.26
FANCA-223	ENST00000567284	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
FANCA-223	ENST00000567284	MYOM2	P54296	1465 aa		13.4	□□□□□ -0.26
FANCA-223	ENST00000567284	ZFYVE9	O95405	1425 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	SLIT1	O75093	1534 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	TRPM1	Q7Z4N2	1603 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	LTK	P29376	864 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	LMTK3	Q96Q04	1460 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	PRAG1	Q86YV5	1406 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	NCKAP5L	Q9HCH0	1330 aa		13.39	□□□□□ -0.27
FANCA-223	ENST00000567284	ARHGAP23	Q9P227	1491 aa		13.38	□□□□□ -0.27
FANCA-223	ENST00000567284	SCAF11	Q99590	1463 aa	Known RBP	13.37	□□□□□ -0.27
FANCA-223	ENST00000567284	ANKLE2	Q86XL3	938 aa		13.37	□□□□□ -0.27
FANCA-223	ENST00000567284	KIAA1210	Q9ULL0	1709 aa		13.36	□□□□□ -0.27
FANCA-223	ENST00000567284	NRXN3	Q9Y4C0	1643 aa		13.35	□□□□□ -0.27
FANCA-223	ENST00000567284	STRC	Q7RTU9	1775 aa		13.35	□□□□□ -0.27
FANCA-223	ENST00000567284	CFAP70	Q5T0N1	1121 aa		13.35	□□□□□ -0.27
FANCA-223	ENST00000567284	STAC3	Q96MF2	364 aa		13.35	□□□□□ -0.27
FANCA-223	ENST00000567284	LAMC1	P11047	1609 aa		13.35	□□□□□ -0.27
FANCA-223	ENST00000567284	ALK	Q9UM73	1620 aa		13.35	□□□□□ -0.27
FANCA-223	ENST00000567284	PIK3C2G	O75747	1445 aa		13.34	□□□□□ -0.27
FANCA-223	ENST00000567284	NRXN1	Q9ULB1	1477 aa		13.34	□□□□□ -0.27
FANCA-223	ENST00000567284	SETD1A	O15047	1707 aa	Known RBP	13.33	□□□□□ -0.27
FANCA-223	ENST00000567284	NBPF1	Q3BBV0	1214 aa		13.33	□□□□□ -0.28
FANCA-223	ENST00000567284	ROCK2	O75116	1388 aa	Known RBP	13.32	□□□□□ -0.28
FANCA-223	ENST00000567284	PLEKHG1	Q9ULL1	1385 aa		13.32	□□□□□ -0.28
FANCA-223	ENST00000567284	RALGAPB	Q86X10	1494 aa		13.32	□□□□□ -0.28
FANCA-223	ENST00000567284	TMEM132E	Q6IEE7	984 aa		13.32	□□□□□ -0.28
FANCA-223	ENST00000567284	SLC26A8	Q96RN1	970 aa		13.32	□□□□□ -0.28
FANCA-223	ENST00000567284	SETBP1	Q9Y6X0	1596 aa		13.32	□□□□□ -0.28
FANCA-223	ENST00000567284	NPHP4	O75161	1426 aa	Predicted RBP	13.31	□□□□□ -0.28
FANCA-223	ENST00000567284	C14orf93	Q9H972	538 aa	Known RBP	13.31	□□□□□ -0.28
FANCA-223	ENST00000567284	CARD11	Q9BXL7	1154 aa		13.3	□□□□□ -0.28
FANCA-223	ENST00000567284	STK26	Q9P289	416 aa		13.29	□□□□□ -0.28
FANCA-223	ENST00000567284	ADAMTS13	Q76LX8	1427 aa		13.28	□□□□□ -0.28
FANCA-223	ENST00000567284	ASXL1	Q8IXJ9	1541 aa		13.28	□□□□□ -0.28
FANCA-223	ENST00000567284	MED14	O60244	1454 aa		13.27	□□□□□ -0.29
FANCA-223	ENST00000567284	DIP2A	Q14689	1571 aa		13.27	□□□□□ -0.29
FANCA-223	ENST00000567284	CHD2	O14647	1828 aa	Known RBP	13.27	□□□□□ -0.29
FANCA-223	ENST00000567284	MET	P08581	1390 aa		13.26	□□□□□ -0.29
FANCA-223	ENST00000567284	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.26	□□□□□ -0.29
FANCA-223	ENST00000567284	TRAK1	Q9UPV9	953 aa		13.26	□□□□□ -0.29
FANCA-223	ENST00000567284	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.25	□□□□□ -0.29
FANCA-223	ENST00000567284	ADGRB1	O14514	1584 aa		13.25	□□□□□ -0.29
FANCA-223	ENST00000567284	TBX22	Q9Y458	520 aa		13.24	□□□□□ -0.29
FANCA-223	ENST00000567284	KNDC1	Q76NI1	1749 aa		13.24	□□□□□ -0.29
FANCA-223	ENST00000567284	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.23	□□□□□ -0.29
FANCA-223	ENST00000567284	HSPA5	P11021	654 aa	Known RBP	13.23	□□□□□ -0.29
FANCA-223	ENST00000567284	QRICH2	Q9H0J4	1663 aa		13.23	□□□□□ -0.29
FANCA-223	ENST00000567284	STRCP1	A6NGW2	1772 aa		13.22	□□□□□ -0.29
FANCA-223	ENST00000567284	GPRASP1	Q5JY77	1395 aa		13.22	□□□□□ -0.29
FANCA-223	ENST00000567284	USP47	Q96K76	1375 aa		13.22	□□□□□ -0.29
FANCA-223	ENST00000567284	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
FANCA-223	ENST00000567284	PTPRU	Q92729	1446 aa		13.22	□□□□□ -0.29
FANCA-223	ENST00000567284	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
FANCA-223	ENST00000567284	AMOTL2	Q9Y2J4	779 aa		13.21	□□□□□ -0.29
FANCA-223	ENST00000567284	LRPPRC	P42704	1394 aa	Known RBP	13.2	□□□□□ -0.3
FANCA-223	ENST00000567284	XRN1	Q8IZH2	1706 aa	Known RBP	13.2	□□□□□ -0.3
FANCA-223	ENST00000567284	POGK	Q9P215	609 aa		13.19	□□□□□ -0.3
FANCA-223	ENST00000567284	EIF3A	Q14152	1382 aa	Known RBP	13.19	□□□□□ -0.3
FANCA-223	ENST00000567284	ST20-MTHFS	A0A0A6YYL1	179 aa		13.18	□□□□□ -0.3
FANCA-223	ENST00000567284	WAPL	Q7Z5K2	1190 aa		13.18	□□□□□ -0.3
FANCA-223	ENST00000567284	PRAM1	Q96QH2	718 aa		13.18	□□□□□ -0.3
FANCA-223	ENST00000567284	DMRT2	Q9Y5R5	561 aa		13.18	□□□□□ -0.3
FANCA-223	ENST00000567284	KCNA6	P17658	529 aa		13.17	□□□□□ -0.3
FANCA-223	ENST00000567284	CPS1	P31327	1500 aa		13.17	□□□□□ -0.3
FANCA-223	ENST00000567284	PIK3R4	Q99570	1358 aa		13.17	□□□□□ -0.3
FANCA-223	ENST00000567284	NWD1	Q149M9	1564 aa		13.16	□□□□□ -0.3
FANCA-223	ENST00000567284	RBM33	Q96EV2	1170 aa	Known RBP	13.16	□□□□□ -0.3
FANCA-223	ENST00000567284	DLC1	Q96QB1	1528 aa		13.16	□□□□□ -0.3
FANCA-223	ENST00000567284	ABCC11	Q96J66	1382 aa		13.16	□□□□□ -0.3
FANCA-223	ENST00000567284	PLEKHH1	Q9ULM0	1364 aa		13.16	□□□□□ -0.3
FANCA-223	ENST00000567284	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.15	□□□□□ -0.3
FANCA-223	ENST00000567284	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.15	□□□□□ -0.3
FANCA-223	ENST00000567284	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.15	□□□□□ -0.3
FANCA-223	ENST00000567284	POLR3GL	Q9BT43	218 aa		13.15	□□□□□ -0.3
FANCA-223	ENST00000567284	ROBO2	Q9HCK4	1378 aa		13.15	□□□□□ -0.3
FANCA-223	ENST00000567284	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.14	□□□□□ -0.31
FANCA-223	ENST00000567284	XIRP1	Q702N8	1843 aa	Known RBP	13.13	□□□□□ -0.31
FANCA-223	ENST00000567284	PROSER2	Q86WR7	435 aa	Predicted RBP	13.13	□□□□□ -0.31
FANCA-223	ENST00000567284	NALCN	Q8IZF0	1738 aa		13.13	□□□□□ -0.31
FANCA-223	ENST00000567284	TECPR2	O15040	1411 aa		13.13	□□□□□ -0.31
FANCA-223	ENST00000567284	C14orf37	Q86TY3	774 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms