RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ARHGAP31Q2M1Z3 1444 aa31.94■■■□□ 2.7
LINC00543-201ENST00000567234 CLTCQ00610 1675 aaKnown RBP31.93■■■□□ 2.7
LINC00543-201ENST00000567234 MROH2AA6NES4 1674 aa31.93■■■□□ 2.7
LINC00543-201ENST00000567234 POLR3GLQ9BT43 218 aa31.91■■■□□ 2.7
LINC00543-201ENST00000567234 TESK2Q96S53 571 aa31.91■■■□□ 2.7
LINC00543-201ENST00000567234 NOS1P29475 1434 aa31.9■■■□□ 2.7
LINC00543-201ENST00000567234 TSHZ2Q9NRE2 1034 aa31.88■■■□□ 2.69
LINC00543-201ENST00000567234 SCAF11Q99590 1463 aaKnown RBP31.87■■■□□ 2.69
LINC00543-201ENST00000567234 NRXN1Q9ULB1 1477 aa31.87■■■□□ 2.69
LINC00543-201ENST00000567234 PIK3C2BO00750 1634 aa31.85■■■□□ 2.69
LINC00543-201ENST00000567234 KTN1Q86UP2 1357 aaKnown RBP31.83■■■□□ 2.69
LINC00543-201ENST00000567234 PPLO60437 1756 aa31.83■■■□□ 2.69
LINC00543-201ENST00000567234 TMF1P82094 1093 aa31.82■■■□□ 2.68
LINC00543-201ENST00000567234 RPGRIP1LQ68CZ1 1315 aa31.8■■■□□ 2.68
LINC00543-201ENST00000567234 PPP6R1Q9UPN7 881 aa31.8■■■□□ 2.68
LINC00543-201ENST00000567234 PREX1Q8TCU6 1659 aa31.79■■■□□ 2.68
LINC00543-201ENST00000567234 SYNMO15061 1565 aa31.78■■■□□ 2.68
LINC00543-201ENST00000567234 EIF3AQ14152 1382 aaKnown RBP31.78■■■□□ 2.68
LINC00543-201ENST00000567234 DISP3Q9P2K9 1392 aa31.78■■■□□ 2.68
LINC00543-201ENST00000567234 MRS2Q9HD23 443 aa31.77■■■□□ 2.68
LINC00543-201ENST00000567234 ADGRF5Q8IZF2 1346 aa31.76■■■□□ 2.67
LINC00543-201ENST00000567234 CCDC184Q52MB2 194 aa31.75■■■□□ 2.67
LINC00543-201ENST00000567234 FBXO31Q5XUX0 539 aaPredicted RBP31.75■■■□□ 2.67
LINC00543-201ENST00000567234 SETBP1Q9Y6X0 1596 aa31.74■■■□□ 2.67
LINC00543-201ENST00000567234 SLC24A1O60721 1099 aa31.73■■■□□ 2.67
LINC00543-201ENST00000567234 ESF1Q9H501 851 aaKnown RBP31.71■■■□□ 2.67
LINC00543-201ENST00000567234 RALBP1Q15311 655 aa31.7■■■□□ 2.66
LINC00543-201ENST00000567234 CDCA8Q53HL2 280 aa31.7■■■□□ 2.66
LINC00543-201ENST00000567234 FER1L4A9Z1Z3 1794 aa31.7■■■□□ 2.66
LINC00543-201ENST00000567234 ERVK-7P63135 1459 aa31.69■■■□□ 2.66
LINC00543-201ENST00000567234 SLC52A1Q9NWF4 448 aa31.69■■■□□ 2.66
LINC00543-201ENST00000567234 PIK3C2GO75747 1445 aa31.69■■■□□ 2.66
LINC00543-201ENST00000567234 ZMYM3Q14202 1370 aa31.68■■■□□ 2.66
LINC00543-201ENST00000567234 CHGAP10645 457 aaKnown RBP31.68■■■□□ 2.66
LINC00543-201ENST00000567234 CFAP70Q5T0N1 1121 aa31.68■■■□□ 2.66
LINC00543-201ENST00000567234 HNRNPUQ00839 825 aaKnown RBP eCLIP31.67■■■□□ 2.66
LINC00543-201ENST00000567234 MYO3AQ8NEV4 1616 aa31.66■■■□□ 2.66
LINC00543-201ENST00000567234 PER1O15534 1290 aaPredicted RBP31.65■■■□□ 2.66
LINC00543-201ENST00000567234 SPATA31D1Q6ZQQ2 1576 aa31.63■■■□□ 2.65
LINC00543-201ENST00000567234 NEXMIFQ5QGS0 1516 aa31.62■■■□□ 2.65
LINC00543-201ENST00000567234 C14orf93Q9H972 538 aaKnown RBP31.61■■■□□ 2.65
LINC00543-201ENST00000567234 MYBBP1AQ9BQG0 1328 aaKnown RBP31.6■■■□□ 2.65
LINC00543-201ENST00000567234 ZFYVE9O95405 1425 aa31.59■■■□□ 2.65
LINC00543-201ENST00000567234 IDI1Q13907 227 aa31.59■■■□□ 2.65
LINC00543-201ENST00000567234 FAM9BQ8IZU0 186 aa31.59■■■□□ 2.65
LINC00543-201ENST00000567234 BRD4O60885 1362 aaPredicted RBP31.59■■■□□ 2.65
LINC00543-201ENST00000567234 PARD3Q8TEW0 1356 aa31.59■■■□□ 2.65
LINC00543-201ENST00000567234 SBNO2Q9Y2G9 1366 aa31.59■■■□□ 2.65
LINC00543-201ENST00000567234 C3P01024 1663 aa31.58■■■□□ 2.65
LINC00543-201ENST00000567234 VGFO15240 615 aaPredicted RBP31.58■■■□□ 2.65
LINC00543-201ENST00000567234 MYO5BQ9ULV0 1848 aa31.57■■■□□ 2.65
LINC00543-201ENST00000567234 KDM5AP29375 1690 aaKnown RBP31.57■■■□□ 2.64
LINC00543-201ENST00000567234 CEBPAP49715 358 aaPredicted RBP31.57■■■□□ 2.64
LINC00543-201ENST00000567234 TMEM131LA2VDJ0 1609 aa31.56■■■□□ 2.64
LINC00543-201ENST00000567234 ADGRB1O14514 1584 aa31.56■■■□□ 2.64
LINC00543-201ENST00000567234 PANK3Q9H999 370 aa31.56■■■□□ 2.64
LINC00543-201ENST00000567234 RIMS1Q86UR5 1692 aaKnown RBP31.54■■■□□ 2.64
LINC00543-201ENST00000567234 PLPPR3Q6T4P5 718 aa31.53■■■□□ 2.64
LINC00543-201ENST00000567234 ADAMTSL3P82987 1691 aa31.52■■■□□ 2.64
LINC00543-201ENST00000567234 MYOM1P52179 1685 aa31.51■■■□□ 2.63
LINC00543-201ENST00000567234 TMC1Q8TDI8 760 aa31.51■■■□□ 2.63
LINC00543-201ENST00000567234 ZBED9Q6R2W3 1325 aa31.5■■■□□ 2.63
LINC00543-201ENST00000567234 BCL11AQ9H165 835 aa31.5■■■□□ 2.63
LINC00543-201ENST00000567234 PNISRQ8TF01 805 aaKnown RBP31.49■■■□□ 2.63
LINC00543-201ENST00000567234 CNGB1Q14028 1251 aaPredicted RBP31.47■■■□□ 2.63
LINC00543-201ENST00000567234 NLRP13Q86W25 1043 aa31.47■■■□□ 2.63
LINC00543-201ENST00000567234 TNRQ92752 1358 aa31.45■■■□□ 2.63
LINC00543-201ENST00000567234 CENPJQ9HC77 1338 aaPredicted RBP31.45■■■□□ 2.62
LINC00543-201ENST00000567234 QRICH2Q9H0J4 1663 aa31.43■■■□□ 2.62
LINC00543-201ENST00000567234 LRPPRCP42704 1394 aaKnown RBP31.43■■■□□ 2.62
LINC00543-201ENST00000567234 NPC1L1Q9UHC9 1359 aa31.39■■■□□ 2.62
LINC00543-201ENST00000567234 NUTM2DQ5VT03 806 aaPredicted RBP31.39■■■□□ 2.62
LINC00543-201ENST00000567234 KNSTRNQ9Y448 316 aa31.39■■■□□ 2.62
LINC00543-201ENST00000567234 ARHGEF28Q8N1W1 1705 aaKnown RBP31.37■■■□□ 2.61
LINC00543-201ENST00000567234 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
LINC00543-201ENST00000567234 ASXL1Q8IXJ9 1541 aa31.37■■■□□ 2.61
LINC00543-201ENST00000567234 STAG3Q9UJ98 1225 aa31.36■■■□□ 2.61
LINC00543-201ENST00000567234 TRAK1Q9UPV9 953 aa31.36■■■□□ 2.61
LINC00543-201ENST00000567234 CC2D1BQ5T0F9 858 aaKnown RBP31.34■■■□□ 2.61
LINC00543-201ENST00000567234 TMEM132EQ6IEE7 984 aa31.34■■■□□ 2.61
LINC00543-201ENST00000567234 NEFLP07196 543 aa31.33■■■□□ 2.61
LINC00543-201ENST00000567234 AMER1Q5JTC6 1135 aaPredicted RBP31.33■■■□□ 2.61
LINC00543-201ENST00000567234 UBR1Q8IWV7 1749 aa31.32■■■□□ 2.6
LINC00543-201ENST00000567234 INSRP06213 1382 aa31.32■■■□□ 2.6
LINC00543-201ENST00000567234 PUS7Q96PZ0 661 aaKnown RBP31.31■■■□□ 2.6
LINC00543-201ENST00000567234 SENP3Q9H4L4 574 aaPredicted RBP31.28■■■□□ 2.6
LINC00543-201ENST00000567234 NLRP1Q9C000 1473 aa31.28■■■□□ 2.6
LINC00543-201ENST00000567234 FKBP8Q14318 412 aa31.24■■■□□ 2.59
LINC00543-201ENST00000567234 ALKQ9UM73 1620 aa31.23■■■□□ 2.59
LINC00543-201ENST00000567234 PTPRMP28827 1452 aa31.23■■■□□ 2.59
LINC00543-201ENST00000567234 RIMS2Q9UQ26 1411 aa31.22■■■□□ 2.59
LINC00543-201ENST00000567234 EVC2Q86UK5 1308 aa31.19■■■□□ 2.58
LINC00543-201ENST00000567234 SMG6Q86US8 1419 aaKnown RBP31.19■■■□□ 2.58
LINC00543-201ENST00000567234 PPP2R1AP30153 589 aa31.17■■■□□ 2.58
LINC00543-201ENST00000567234 RBM19Q9Y4C8 960 aaKnown RBP31.17■■■□□ 2.58
LINC00543-201ENST00000567234 TULP4Q9NRJ4 1543 aa31.17■■■□□ 2.58
LINC00543-201ENST00000567234 YTHDC2Q9H6S0 1430 aaKnown RBP31.17■■■□□ 2.58
LINC00543-201ENST00000567234 CEP170BQ9Y4F5 1589 aaPredicted RBP31.15■■■□□ 2.58
LINC00543-201ENST00000567234 CARD14Q9BXL6 1004 aa31.14■■■□□ 2.58
LINC00543-201ENST00000567234 TMEM2Q9UHN6 1383 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms