RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 RIMS2Q9UQ26 1411 aa25.17■■□□□ 1.62
USB1-211ENST00000565662 LRRC7Q96NW7 1537 aa25.17■■□□□ 1.62
USB1-211ENST00000565662 NKTRP30414 1462 aaKnown RBP25.16■■□□□ 1.62
USB1-211ENST00000565662 STRCP1A6NGW2 1772 aa25.16■■□□□ 1.62
USB1-211ENST00000565662 PPP1R15AO75807 674 aaPredicted RBP25.15■■□□□ 1.62
USB1-211ENST00000565662 TRPM2O94759 1503 aa25.15■■□□□ 1.62
USB1-211ENST00000565662 NWD1Q149M9 1564 aa25.14■■□□□ 1.62
USB1-211ENST00000565662 CHGAP10645 457 aaKnown RBP25.09■■□□□ 1.61
USB1-211ENST00000565662 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
USB1-211ENST00000565662 KIF1BO60333 1816 aa25.08■■□□□ 1.61
USB1-211ENST00000565662 KCNA6P17658 529 aa25.08■■□□□ 1.61
USB1-211ENST00000565662 BCANQ96GW7 911 aa25.08■■□□□ 1.61
USB1-211ENST00000565662 TRIM52Q96A61 297 aa25.04■■□□□ 1.6
USB1-211ENST00000565662 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
USB1-211ENST00000565662 CHD2O14647 1828 aaKnown RBP25.04■■□□□ 1.6
USB1-211ENST00000565662 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
USB1-211ENST00000565662 NCOA3Q9Y6Q9 1424 aa25.02■■□□□ 1.6
USB1-211ENST00000565662 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
USB1-211ENST00000565662 SLC4A1APQ9BWU0 796 aaKnown RBP25.01■■□□□ 1.59
USB1-211ENST00000565662 XIRP1Q702N8 1843 aaKnown RBP25■■□□□ 1.59
USB1-211ENST00000565662 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
USB1-211ENST00000565662 SETBP1Q9Y6X0 1596 aa25■■□□□ 1.59
USB1-211ENST00000565662 TMEM94Q12767 1356 aa24.97■■□□□ 1.59
USB1-211ENST00000565662 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
USB1-211ENST00000565662 ZNF326Q5BKZ1 582 aaKnown RBP24.96■■□□□ 1.59
USB1-211ENST00000565662 ALKQ9UM73 1620 aa24.96■■□□□ 1.59
USB1-211ENST00000565662 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
USB1-211ENST00000565662 MSH6P52701 1360 aa24.95■■□□□ 1.59
USB1-211ENST00000565662 PROSER2Q86WR7 435 aaPredicted RBP24.95■■□□□ 1.58
USB1-211ENST00000565662 RPGRIP1LQ68CZ1 1315 aa24.93■■□□□ 1.58
USB1-211ENST00000565662 NEXMIFQ5QGS0 1516 aa24.93■■□□□ 1.58
USB1-211ENST00000565662 SETD5Q9C0A6 1442 aa24.92■■□□□ 1.58
USB1-211ENST00000565662 CCDC144AA2RUR9 1427 aa24.9■■□□□ 1.58
USB1-211ENST00000565662 FAM135BQ49AJ0 1406 aa24.89■■□□□ 1.58
USB1-211ENST00000565662 NRXN3Q9Y4C0 1643 aa24.88■■□□□ 1.57
USB1-211ENST00000565662 VGFO15240 615 aaPredicted RBP24.88■■□□□ 1.57
USB1-211ENST00000565662 DISP3Q9P2K9 1392 aa24.86■■□□□ 1.57
USB1-211ENST00000565662 HSPA1LP34931 641 aa24.85■■□□□ 1.57
USB1-211ENST00000565662 XRN1Q8IZH2 1706 aaKnown RBP24.85■■□□□ 1.57
USB1-211ENST00000565662 DCCP43146 1447 aa24.84■■□□□ 1.57
USB1-211ENST00000565662 PPLO60437 1756 aa24.83■■□□□ 1.57
USB1-211ENST00000565662 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
USB1-211ENST00000565662 MPHOSPH9Q99550 1183 aa24.82■■□□□ 1.56
USB1-211ENST00000565662 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
USB1-211ENST00000565662 ROBO1Q9Y6N7 1651 aa24.79■■□□□ 1.56
USB1-211ENST00000565662 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
USB1-211ENST00000565662 HRCP23327 699 aa24.78■■□□□ 1.56
USB1-211ENST00000565662 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
USB1-211ENST00000565662 AMOTL2Q9Y2J4 779 aa24.78■■□□□ 1.56
USB1-211ENST00000565662 PRAG1Q86YV5 1406 aa24.78■■□□□ 1.56
USB1-211ENST00000565662 C19orf44Q9H6X5 657 aa24.77■■□□□ 1.56
USB1-211ENST00000565662 RAB3GAP2Q9H2M9 1393 aa24.76■■□□□ 1.55
USB1-211ENST00000565662 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
USB1-211ENST00000565662 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
USB1-211ENST00000565662 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.75■■□□□ 1.55
USB1-211ENST00000565662 ATF3P18847 181 aa24.74■■□□□ 1.55
USB1-211ENST00000565662 SETD1AO15047 1707 aaKnown RBP24.74■■□□□ 1.55
USB1-211ENST00000565662 IFT172Q9UG01 1749 aa24.74■■□□□ 1.55
USB1-211ENST00000565662 PTPRUQ92729 1446 aa24.73■■□□□ 1.55
USB1-211ENST00000565662 SPATA31E1Q6ZUB1 1445 aa24.72■■□□□ 1.55
USB1-211ENST00000565662 SLAIN2Q9P270 581 aa24.72■■□□□ 1.55
USB1-211ENST00000565662 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
USB1-211ENST00000565662 METP08581 1390 aa24.7■■□□□ 1.55
USB1-211ENST00000565662 ADGRL3Q9HAR2 1447 aa24.69■■□□□ 1.54
USB1-211ENST00000565662 LAMC1P11047 1609 aa24.67■■□□□ 1.54
USB1-211ENST00000565662 PHLPP1O60346 1717 aa24.66■■□□□ 1.54
USB1-211ENST00000565662 FOXD1Q16676 465 aa24.66■■□□□ 1.54
USB1-211ENST00000565662 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
USB1-211ENST00000565662 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
USB1-211ENST00000565662 MYOM2P54296 1465 aa24.64■■□□□ 1.53
USB1-211ENST00000565662 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
USB1-211ENST00000565662 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
USB1-211ENST00000565662 STAC3Q96MF2 364 aa24.61■■□□□ 1.53
USB1-211ENST00000565662 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
USB1-211ENST00000565662 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
USB1-211ENST00000565662 JCADQ9P266 1359 aa24.59■■□□□ 1.53
USB1-211ENST00000565662 TECPR2O15040 1411 aa24.59■■□□□ 1.53
USB1-211ENST00000565662 RGL3Q3MIN7 710 aa24.58■■□□□ 1.53
USB1-211ENST00000565662 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
USB1-211ENST00000565662 MST1RQ04912 1400 aa24.56■■□□□ 1.52
USB1-211ENST00000565662 NRXN1Q9ULB1 1477 aa24.56■■□□□ 1.52
USB1-211ENST00000565662 ASXL1Q8IXJ9 1541 aa24.55■■□□□ 1.52
USB1-211ENST00000565662 ADGRF5Q8IZF2 1346 aa24.54■■□□□ 1.52
USB1-211ENST00000565662 CDC42BPGQ6DT37 1551 aa24.54■■□□□ 1.52
USB1-211ENST00000565662 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
USB1-211ENST00000565662 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
USB1-211ENST00000565662 ROBO2Q9HCK4 1378 aa24.53■■□□□ 1.52
USB1-211ENST00000565662 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
USB1-211ENST00000565662 SPATA31A6Q5VVP1 1343 aa24.52■■□□□ 1.52
USB1-211ENST00000565662 ABCC11Q96J66 1382 aa24.52■■□□□ 1.52
USB1-211ENST00000565662 BRINP3Q76B58 766 aa24.5■■□□□ 1.51
USB1-211ENST00000565662 DHX57Q6P158 1386 aaKnown RBP24.47■■□□□ 1.51
USB1-211ENST00000565662 SOCS7O14512 581 aa24.47■■□□□ 1.51
USB1-211ENST00000565662 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
USB1-211ENST00000565662 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
USB1-211ENST00000565662 YTHDC2Q9H6S0 1430 aaKnown RBP24.46■■□□□ 1.51
USB1-211ENST00000565662 C14orf93Q9H972 538 aaKnown RBP24.46■■□□□ 1.51
USB1-211ENST00000565662 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
USB1-211ENST00000565662 DLC1Q96QB1 1528 aa24.42■■□□□ 1.5
USB1-211ENST00000565662 LRRC59Q96AG4 307 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms