RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 WASHC2AQ641Q2 1341 aa27.03■■□□□ 1.92
PKD1-230ENST00000565639 POLR1AO95602 1720 aaPredicted RBP27.02■■□□□ 1.92
PKD1-230ENST00000565639 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.91
PKD1-230ENST00000565639 ADGRF5Q8IZF2 1346 aa27■■□□□ 1.91
PKD1-230ENST00000565639 CCDC7Q96M83 1385 aa26.99■■□□□ 1.91
PKD1-230ENST00000565639 NEXMIFQ5QGS0 1516 aa26.98■■□□□ 1.91
PKD1-230ENST00000565639 MIER1Q8N108 512 aa26.98■■□□□ 1.91
PKD1-230ENST00000565639 C11orf95C9JLR9 678 aaPredicted RBP26.97■■□□□ 1.91
PKD1-230ENST00000565639 ST20-MTHFSA0A0A6YYL1 179 aa26.96■■□□□ 1.91
PKD1-230ENST00000565639 ZFYVE9O95405 1425 aa26.96■■□□□ 1.91
PKD1-230ENST00000565639 PIK3C2GO75747 1445 aa26.95■■□□□ 1.91
PKD1-230ENST00000565639 VGFO15240 615 aaPredicted RBP26.95■■□□□ 1.9
PKD1-230ENST00000565639 MYO5BQ9ULV0 1848 aa26.93■■□□□ 1.9
PKD1-230ENST00000565639 KIF7Q2M1P5 1343 aa26.93■■□□□ 1.9
PKD1-230ENST00000565639 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
PKD1-230ENST00000565639 SCAF11Q99590 1463 aaKnown RBP26.91■■□□□ 1.9
PKD1-230ENST00000565639 FER1L4A9Z1Z3 1794 aa26.91■■□□□ 1.9
PKD1-230ENST00000565639 TNRQ92752 1358 aa26.9■■□□□ 1.9
PKD1-230ENST00000565639 CFAP70Q5T0N1 1121 aa26.9■■□□□ 1.9
PKD1-230ENST00000565639 SETBP1Q9Y6X0 1596 aa26.9■■□□□ 1.9
PKD1-230ENST00000565639 C14orf93Q9H972 538 aaKnown RBP26.88■■□□□ 1.89
PKD1-230ENST00000565639 STAG3Q9UJ98 1225 aa26.88■■□□□ 1.89
PKD1-230ENST00000565639 A2ML1A8K2U0 1454 aa26.88■■□□□ 1.89
PKD1-230ENST00000565639 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
PKD1-230ENST00000565639 C3P01024 1663 aa26.84■■□□□ 1.89
PKD1-230ENST00000565639 EIF3AQ14152 1382 aaKnown RBP26.84■■□□□ 1.89
PKD1-230ENST00000565639 TESK2Q96S53 571 aa26.82■■□□□ 1.88
PKD1-230ENST00000565639 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
PKD1-230ENST00000565639 ADGRB1O14514 1584 aa26.8■■□□□ 1.88
PKD1-230ENST00000565639 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
PKD1-230ENST00000565639 RIMS2Q9UQ26 1411 aa26.77■■□□□ 1.88
PKD1-230ENST00000565639 CEBPAP49715 358 aaPredicted RBP26.76■■□□□ 1.87
PKD1-230ENST00000565639 ANP32CO43423 234 aa26.75■■□□□ 1.87
PKD1-230ENST00000565639 TMF1P82094 1093 aa26.75■■□□□ 1.87
PKD1-230ENST00000565639 UBR1Q8IWV7 1749 aa26.74■■□□□ 1.87
PKD1-230ENST00000565639 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
PKD1-230ENST00000565639 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.73■■□□□ 1.87
PKD1-230ENST00000565639 MYO3AQ8NEV4 1616 aa26.73■■□□□ 1.87
PKD1-230ENST00000565639 ADAMTSL3P82987 1691 aa26.73■■□□□ 1.87
PKD1-230ENST00000565639 HDGFP51858 240 aaKnown RBP26.71■■□□□ 1.87
PKD1-230ENST00000565639 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
PKD1-230ENST00000565639 POLR3GLQ9BT43 218 aa26.7■■□□□ 1.86
PKD1-230ENST00000565639 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
PKD1-230ENST00000565639 SBNO2Q9Y2G9 1366 aa26.69■■□□□ 1.86
PKD1-230ENST00000565639 TMEM132EQ6IEE7 984 aa26.67■■□□□ 1.86
PKD1-230ENST00000565639 TMEM2Q9UHN6 1383 aa26.67■■□□□ 1.86
PKD1-230ENST00000565639 ALKQ9UM73 1620 aa26.67■■□□□ 1.86
PKD1-230ENST00000565639 CDCA8Q53HL2 280 aa26.66■■□□□ 1.86
PKD1-230ENST00000565639 ASXL1Q8IXJ9 1541 aa26.66■■□□□ 1.86
PKD1-230ENST00000565639 CENPJQ9HC77 1338 aaPredicted RBP26.64■■□□□ 1.86
PKD1-230ENST00000565639 TRAK1Q9UPV9 953 aa26.64■■□□□ 1.85
PKD1-230ENST00000565639 CCER2I3L3R5 266 aa26.62■■□□□ 1.85
PKD1-230ENST00000565639 ARHGEF28Q8N1W1 1705 aaKnown RBP26.61■■□□□ 1.85
PKD1-230ENST00000565639 SLIT1O75093 1534 aa26.59■■□□□ 1.85
PKD1-230ENST00000565639 NRXN3Q9Y4C0 1643 aa26.59■■□□□ 1.85
PKD1-230ENST00000565639 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
PKD1-230ENST00000565639 YTHDC2Q9H6S0 1430 aaKnown RBP26.58■■□□□ 1.85
PKD1-230ENST00000565639 ARHGAP23Q9P227 1491 aa26.58■■□□□ 1.85
PKD1-230ENST00000565639 PLPPR3Q6T4P5 718 aa26.58■■□□□ 1.85
PKD1-230ENST00000565639 QRICH2Q9H0J4 1663 aa26.58■■□□□ 1.84
PKD1-230ENST00000565639 PTPRMP28827 1452 aa26.57■■□□□ 1.84
PKD1-230ENST00000565639 THEMISQ8N1K5 641 aaPredicted RBP26.56■■□□□ 1.84
PKD1-230ENST00000565639 PRKRIP1Q9H875 184 aaPredicted RBP26.55■■□□□ 1.84
PKD1-230ENST00000565639 CEP170BQ9Y4F5 1589 aaPredicted RBP26.53■■□□□ 1.84
PKD1-230ENST00000565639 PLEKHG1Q9ULL1 1385 aa26.53■■□□□ 1.84
PKD1-230ENST00000565639 SENP3Q9H4L4 574 aaPredicted RBP26.52■■□□□ 1.84
PKD1-230ENST00000565639 EID1Q9Y6B2 187 aa26.52■■□□□ 1.84
PKD1-230ENST00000565639 LRPPRCP42704 1394 aaKnown RBP26.51■■□□□ 1.83
PKD1-230ENST00000565639 DLC1Q96QB1 1528 aa26.51■■□□□ 1.83
PKD1-230ENST00000565639 SETD1BQ9UPS6 1966 aaKnown RBP26.51■■□□□ 1.83
PKD1-230ENST00000565639 STK26Q9P289 416 aa26.5■■□□□ 1.83
PKD1-230ENST00000565639 LTKP29376 864 aa26.49■■□□□ 1.83
PKD1-230ENST00000565639 TXNDC2Q86VQ3 553 aa26.49■■□□□ 1.83
PKD1-230ENST00000565639 ZNF142P52746 1687 aaPredicted RBP26.49■■□□□ 1.83
PKD1-230ENST00000565639 ABCC11Q96J66 1382 aa26.48■■□□□ 1.83
PKD1-230ENST00000565639 PUS7Q96PZ0 661 aaKnown RBP26.47■■□□□ 1.83
PKD1-230ENST00000565639 MYOM1P52179 1685 aa26.46■■□□□ 1.83
PKD1-230ENST00000565639 PER1O15534 1290 aaPredicted RBP26.46■■□□□ 1.83
PKD1-230ENST00000565639 ADAMTS13Q76LX8 1427 aa26.46■■□□□ 1.83
PKD1-230ENST00000565639 PANK3Q9H999 370 aa26.45■■□□□ 1.82
PKD1-230ENST00000565639 METP08581 1390 aa26.45■■□□□ 1.82
PKD1-230ENST00000565639 KTN1Q86UP2 1357 aaKnown RBP26.45■■□□□ 1.82
PKD1-230ENST00000565639 MED14O60244 1454 aa26.43■■□□□ 1.82
PKD1-230ENST00000565639 EVC2Q86UK5 1308 aa26.43■■□□□ 1.82
PKD1-230ENST00000565639 BCANQ96GW7 911 aa26.43■■□□□ 1.82
PKD1-230ENST00000565639 PRAM1Q96QH2 718 aa26.42■■□□□ 1.82
PKD1-230ENST00000565639 TECPR2O15040 1411 aa26.42■■□□□ 1.82
PKD1-230ENST00000565639 POGKQ9P215 609 aa26.42■■□□□ 1.82
PKD1-230ENST00000565639 KNDC1Q76NI1 1749 aa26.42■■□□□ 1.82
PKD1-230ENST00000565639 TULP4Q9NRJ4 1543 aa26.41■■□□□ 1.82
PKD1-230ENST00000565639 SIRT1Q96EB6 747 aa26.4■■□□□ 1.82
PKD1-230ENST00000565639 YTHDC1Q96MU7 727 aaKnown RBP26.4■■□□□ 1.82
PKD1-230ENST00000565639 DIP2AQ14689 1571 aa26.38■■□□□ 1.81
PKD1-230ENST00000565639 FAM135BQ49AJ0 1406 aa26.37■■□□□ 1.81
PKD1-230ENST00000565639 RALBP1Q15311 655 aa26.37■■□□□ 1.81
PKD1-230ENST00000565639 CPS1P31327 1500 aa26.37■■□□□ 1.81
PKD1-230ENST00000565639 TBX22Q9Y458 520 aa26.37■■□□□ 1.81
PKD1-230ENST00000565639 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
PKD1-230ENST00000565639 CENPBP07199 599 aaPredicted RBP26.35■■□□□ 1.81
PKD1-230ENST00000565639 KNSTRNQ9Y448 316 aa26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms