RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SLC52A1Q9NWF4 448 aa14.44□□□□□ -0.1
VPS9D1-205ENST00000565452 TET3O43151 1660 aa14.43□□□□□ -0.1
VPS9D1-205ENST00000565452 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-205ENST00000565452 LRRC59Q96AG4 307 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-205ENST00000565452 TBX22Q9Y458 520 aa14.43□□□□□ -0.1
VPS9D1-205ENST00000565452 KANK1Q14678 1352 aa14.43□□□□□ -0.1
VPS9D1-205ENST00000565452 EHBP1L1Q8N3D4 1523 aa14.42□□□□□ -0.1
VPS9D1-205ENST00000565452 CCDC125Q86Z20 511 aa14.42□□□□□ -0.1
VPS9D1-205ENST00000565452 ATAD2Q6PL18 1390 aa14.42□□□□□ -0.1
VPS9D1-205ENST00000565452 CFAP65Q6ZU64 1925 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-205ENST00000565452 BRINP3Q76B58 766 aa14.41□□□□□ -0.1
VPS9D1-205ENST00000565452 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
VPS9D1-205ENST00000565452 EFCAB6Q5THR3 1501 aa14.41□□□□□ -0.1
VPS9D1-205ENST00000565452 RRP7BPQ9NSQ0 103 aa14.4□□□□□ -0.1
VPS9D1-205ENST00000565452 COL16A1Q07092 1604 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-205ENST00000565452 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS9D1-205ENST00000565452 RGS12O14924 1447 aa14.38□□□□□ -0.11
VPS9D1-205ENST00000565452 PLEKHG1Q9ULL1 1385 aa14.36□□□□□ -0.11
VPS9D1-205ENST00000565452 EIF2AK4Q9P2K8 1649 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-205ENST00000565452 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
VPS9D1-205ENST00000565452 TRPC5Q9UL62 973 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-205ENST00000565452 DUOX2Q9NRD8 1548 aa14.35□□□□□ -0.11
VPS9D1-205ENST00000565452 NWD1Q149M9 1564 aa14.34□□□□□ -0.11
VPS9D1-205ENST00000565452 ADAMTS2O95450 1211 aa14.34□□□□□ -0.11
VPS9D1-205ENST00000565452 USP21Q9UK80 565 aa14.34□□□□□ -0.11
VPS9D1-205ENST00000565452 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
VPS9D1-205ENST00000565452 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.11
VPS9D1-205ENST00000565452 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.11
VPS9D1-205ENST00000565452 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.11
VPS9D1-205ENST00000565452 AMOTL2Q9Y2J4 779 aa14.33□□□□□ -0.12
VPS9D1-205ENST00000565452 MAST1Q9Y2H9 1570 aa14.32□□□□□ -0.12
VPS9D1-205ENST00000565452 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
VPS9D1-205ENST00000565452 CEP152O94986 1710 aa14.31□□□□□ -0.12
VPS9D1-205ENST00000565452 MYOM3Q5VTT5 1437 aa14.31□□□□□ -0.12
VPS9D1-205ENST00000565452 ERBINQ96RT1 1412 aa14.31□□□□□ -0.12
VPS9D1-205ENST00000565452 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
VPS9D1-205ENST00000565452 KDM5AP29375 1690 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-205ENST00000565452 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-205ENST00000565452 NOS1P29475 1434 aa14.29□□□□□ -0.12
VPS9D1-205ENST00000565452 RIMS2Q9UQ26 1411 aa14.29□□□□□ -0.12
VPS9D1-205ENST00000565452 FNBP4Q8N3X1 1017 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-205ENST00000565452 SETBP1Q9Y6X0 1596 aa14.27□□□□□ -0.12
VPS9D1-205ENST00000565452 ZFYVE9O95405 1425 aa14.26□□□□□ -0.13
VPS9D1-205ENST00000565452 PNPLA6Q8IY17 1366 aa14.26□□□□□ -0.13
VPS9D1-205ENST00000565452 DDX17Q92841 729 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-205ENST00000565452 DIP2AQ14689 1571 aa14.26□□□□□ -0.13
VPS9D1-205ENST00000565452 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-205ENST00000565452 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
VPS9D1-205ENST00000565452 SF3B2Q13435 895 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-205ENST00000565452 LMTK2Q8IWU2 1503 aa14.24□□□□□ -0.13
VPS9D1-205ENST00000565452 DCCP43146 1447 aa14.24□□□□□ -0.13
VPS9D1-205ENST00000565452 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
VPS9D1-205ENST00000565452 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-205ENST00000565452 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
VPS9D1-205ENST00000565452 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
VPS9D1-205ENST00000565452 ASXL1Q8IXJ9 1541 aa14.21□□□□□ -0.13
VPS9D1-205ENST00000565452 GJD4Q96KN9 370 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-205ENST00000565452 ABCC5O15440 1437 aa14.21□□□□□ -0.13
VPS9D1-205ENST00000565452 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-205ENST00000565452 MST1RQ04912 1400 aa14.2□□□□□ -0.14
VPS9D1-205ENST00000565452 ATRNO75882 1429 aa14.18□□□□□ -0.14
VPS9D1-205ENST00000565452 DEFB132Q7Z7B7 95 aa14.18□□□□□ -0.14
VPS9D1-205ENST00000565452 BLMP54132 1417 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-205ENST00000565452 PTCH1Q13635 1447 aa14.17□□□□□ -0.14
VPS9D1-205ENST00000565452 RPRD2Q5VT52 1461 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-205ENST00000565452 SOS2Q07890 1332 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-205ENST00000565452 PTPRUQ92729 1446 aa14.16□□□□□ -0.14
VPS9D1-205ENST00000565452 HRCP23327 699 aa14.13□□□□□ -0.15
VPS9D1-205ENST00000565452 ORAI2Q96SN7 254 aa14.13□□□□□ -0.15
VPS9D1-205ENST00000565452 TRPM2O94759 1503 aa14.12□□□□□ -0.15
VPS9D1-205ENST00000565452 DAPK1P53355 1430 aa14.12□□□□□ -0.15
VPS9D1-205ENST00000565452 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-205ENST00000565452 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
VPS9D1-205ENST00000565452 EP400Q96L91 3159 aa14.11□□□□□ -0.15
VPS9D1-205ENST00000565452 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
VPS9D1-205ENST00000565452 TMEM131LA2VDJ0 1609 aa14.1□□□□□ -0.15
VPS9D1-205ENST00000565452 C1orf167Q5SNV9 1468 aa14.1□□□□□ -0.15
VPS9D1-205ENST00000565452 NHSL1Q5SYE7 1610 aa14.09□□□□□ -0.15
VPS9D1-205ENST00000565452 YY1P25490 414 aa14.09□□□□□ -0.15
VPS9D1-205ENST00000565452 BAG6P46379 1132 aa14.09□□□□□ -0.15
VPS9D1-205ENST00000565452 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.15
VPS9D1-205ENST00000565452 ZNF326Q5BKZ1 582 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-205ENST00000565452 SEPT12Q8IYM1 358 aa14.08□□□□□ -0.16
VPS9D1-205ENST00000565452 METP08581 1390 aa14.08□□□□□ -0.16
VPS9D1-205ENST00000565452 APLP2Q06481 763 aa14.07□□□□□ -0.16
VPS9D1-205ENST00000565452 KRT27Q7Z3Y8 459 aa14.06□□□□□ -0.16
VPS9D1-205ENST00000565452 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
VPS9D1-205ENST00000565452 ANKRD50Q9ULJ7 1429 aa14.06□□□□□ -0.16
VPS9D1-205ENST00000565452 ESCO1Q5FWF5 840 aa14.05□□□□□ -0.16
VPS9D1-205ENST00000565452 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-205ENST00000565452 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
VPS9D1-205ENST00000565452 LRP5O75197 1615 aa14.03□□□□□ -0.16
VPS9D1-205ENST00000565452 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
VPS9D1-205ENST00000565452 FOXO3O43524 673 aa14.02□□□□□ -0.17
VPS9D1-205ENST00000565452 VPS72Q15906 364 aa14.02□□□□□ -0.17
VPS9D1-205ENST00000565452 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-205ENST00000565452 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
VPS9D1-205ENST00000565452 RALGAPBQ86X10 1494 aa14.01□□□□□ -0.17
VPS9D1-205ENST00000565452 LRPPRCP42704 1394 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-205ENST00000565452 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms