RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
RNF40-205ENST00000563909 KANK1Q14678 1352 aa25.28■■□□□ 1.64
RNF40-205ENST00000563909 KIF15Q9NS87 1388 aa25.28■■□□□ 1.64
RNF40-205ENST00000563909 SHPRHQ149N8 1683 aa25.27■■□□□ 1.64
RNF40-205ENST00000563909 RRP7BPQ9NSQ0 103 aa25.27■■□□□ 1.64
RNF40-205ENST00000563909 AFF2P51816 1311 aa25.26■■□□□ 1.63
RNF40-205ENST00000563909 AHDC1Q5TGY3 1603 aaPredicted RBP25.24■■□□□ 1.63
RNF40-205ENST00000563909 ERBINQ96RT1 1412 aa25.24■■□□□ 1.63
RNF40-205ENST00000563909 ATF3P18847 181 aa25.24■■□□□ 1.63
RNF40-205ENST00000563909 CADPS2Q86UW7 1296 aa25.24■■□□□ 1.63
RNF40-205ENST00000563909 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
RNF40-205ENST00000563909 MYOM3Q5VTT5 1437 aa25.22■■□□□ 1.63
RNF40-205ENST00000563909 NCOA3Q9Y6Q9 1424 aa25.22■■□□□ 1.63
RNF40-205ENST00000563909 CHD2O14647 1828 aaKnown RBP25.22■■□□□ 1.63
RNF40-205ENST00000563909 NUTM2DQ5VT03 806 aaPredicted RBP25.21■■□□□ 1.63
RNF40-205ENST00000563909 C19orf44Q9H6X5 657 aa25.21■■□□□ 1.63
RNF40-205ENST00000563909 PPP1R15AO75807 674 aaPredicted RBP25.2■■□□□ 1.62
RNF40-205ENST00000563909 SLC52A1Q9NWF4 448 aa25.2■■□□□ 1.62
RNF40-205ENST00000563909 PLEKHG1Q9ULL1 1385 aa25.19■■□□□ 1.62
RNF40-205ENST00000563909 QTRT2Q9H974 415 aaKnown RBP25.19■■□□□ 1.62
RNF40-205ENST00000563909 RGS12O14924 1447 aa25.19■■□□□ 1.62
RNF40-205ENST00000563909 RBM6P78332 1123 aaKnown RBP25.18■■□□□ 1.62
RNF40-205ENST00000563909 BRINP3Q76B58 766 aa25.17■■□□□ 1.62
RNF40-205ENST00000563909 TBX22Q9Y458 520 aa25.17■■□□□ 1.62
RNF40-205ENST00000563909 NOS1P29475 1434 aa25.17■■□□□ 1.62
RNF40-205ENST00000563909 HDGFP51858 240 aaKnown RBP25.16■■□□□ 1.62
RNF40-205ENST00000563909 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.15■■□□□ 1.62
RNF40-205ENST00000563909 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
RNF40-205ENST00000563909 C8orf37Q96NL8 207 aa25.15■■□□□ 1.62
RNF40-205ENST00000563909 LMTK2Q8IWU2 1503 aa25.15■■□□□ 1.62
RNF40-205ENST00000563909 ZFYVE9O95405 1425 aa25.14■■□□□ 1.62
RNF40-205ENST00000563909 ZRANB1Q9UGI0 708 aa25.13■■□□□ 1.61
RNF40-205ENST00000563909 RIMS2Q9UQ26 1411 aa25.12■■□□□ 1.61
RNF40-205ENST00000563909 FOXD1Q16676 465 aa25.11■■□□□ 1.61
RNF40-205ENST00000563909 ABCC5O15440 1437 aa25.11■■□□□ 1.61
RNF40-205ENST00000563909 KANK4Q5T7N3 995 aaPredicted RBP25.09■■□□□ 1.61
RNF40-205ENST00000563909 ATAD2Q6PL18 1390 aa25.08■■□□□ 1.61
RNF40-205ENST00000563909 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
RNF40-205ENST00000563909 LRRC59Q96AG4 307 aaKnown RBP25.07■■□□□ 1.6
RNF40-205ENST00000563909 NGLY1Q96IV0 654 aa25.07■■□□□ 1.6
RNF40-205ENST00000563909 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
RNF40-205ENST00000563909 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.04■■□□□ 1.6
RNF40-205ENST00000563909 MYO5BQ9ULV0 1848 aa25.03■■□□□ 1.6
RNF40-205ENST00000563909 ASXL1Q8IXJ9 1541 aa25.03■■□□□ 1.6
RNF40-205ENST00000563909 CHIC2Q9UKJ5 165 aa25.03■■□□□ 1.6
RNF40-205ENST00000563909 ADAMTS13Q76LX8 1427 aa25.03■■□□□ 1.6
RNF40-205ENST00000563909 AMOTL2Q9Y2J4 779 aa25.02■■□□□ 1.6
RNF40-205ENST00000563909 PIK3R4Q99570 1358 aa25.02■■□□□ 1.6
RNF40-205ENST00000563909 SETBP1Q9Y6X0 1596 aa25.01■■□□□ 1.59
RNF40-205ENST00000563909 CHGAP10645 457 aaKnown RBP25.01■■□□□ 1.59
RNF40-205ENST00000563909 ADAMTS2O95450 1211 aa25■■□□□ 1.59
RNF40-205ENST00000563909 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
RNF40-205ENST00000563909 DAPK1P53355 1430 aa25■■□□□ 1.59
RNF40-205ENST00000563909 TMEM131LA2VDJ0 1609 aa24.99■■□□□ 1.59
RNF40-205ENST00000563909 GCC2Q8IWJ2 1684 aa24.99■■□□□ 1.59
RNF40-205ENST00000563909 DDX17Q92841 729 aaKnown RBP24.99■■□□□ 1.59
RNF40-205ENST00000563909 EP400Q96L91 3159 aa24.99■■□□□ 1.59
RNF40-205ENST00000563909 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
RNF40-205ENST00000563909 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
RNF40-205ENST00000563909 DCCP43146 1447 aa24.96■■□□□ 1.59
RNF40-205ENST00000563909 NHSL1Q5SYE7 1610 aa24.95■■□□□ 1.58
RNF40-205ENST00000563909 USP21Q9UK80 565 aa24.95■■□□□ 1.58
RNF40-205ENST00000563909 MST1RQ04912 1400 aa24.95■■□□□ 1.58
RNF40-205ENST00000563909 PTPRUQ92729 1446 aa24.94■■□□□ 1.58
RNF40-205ENST00000563909 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
RNF40-205ENST00000563909 TRPC5Q9UL62 973 aaPredicted RBP24.92■■□□□ 1.58
RNF40-205ENST00000563909 VPS8Q8N3P4 1428 aa24.92■■□□□ 1.58
RNF40-205ENST00000563909 TRPM2O94759 1503 aa24.91■■□□□ 1.58
RNF40-205ENST00000563909 CCDC125Q86Z20 511 aa24.91■■□□□ 1.58
RNF40-205ENST00000563909 FNBP4Q8N3X1 1017 aaPredicted RBP24.84■■□□□ 1.57
RNF40-205ENST00000563909 ATRNO75882 1429 aa24.81■■□□□ 1.56
RNF40-205ENST00000563909 UNC13BO14795 1591 aa24.8■■□□□ 1.56
RNF40-205ENST00000563909 XRN1Q8IZH2 1706 aaKnown RBP24.79■■□□□ 1.56
RNF40-205ENST00000563909 ANKRD50Q9ULJ7 1429 aa24.78■■□□□ 1.56
RNF40-205ENST00000563909 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
RNF40-205ENST00000563909 ADGRL3Q9HAR2 1447 aa24.78■■□□□ 1.56
RNF40-205ENST00000563909 SOS2Q07890 1332 aaPredicted RBP24.75■■□□□ 1.55
RNF40-205ENST00000563909 METP08581 1390 aa24.75■■□□□ 1.55
RNF40-205ENST00000563909 ADGRL2O95490 1459 aa24.75■■□□□ 1.55
RNF40-205ENST00000563909 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
RNF40-205ENST00000563909 ORAI2Q96SN7 254 aa24.72■■□□□ 1.55
RNF40-205ENST00000563909 NRXN3Q9Y4C0 1643 aa24.72■■□□□ 1.55
RNF40-205ENST00000563909 GJD4Q96KN9 370 aaPredicted RBP24.71■■□□□ 1.55
RNF40-205ENST00000563909 DEFB132Q7Z7B7 95 aa24.7■■□□□ 1.54
RNF40-205ENST00000563909 BCL9LQ86UU0 1499 aa24.7■■□□□ 1.54
RNF40-205ENST00000563909 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
RNF40-205ENST00000563909 E9PCH4 1651 aa24.69■■□□□ 1.54
RNF40-205ENST00000563909 NALCNQ8IZF0 1738 aa24.69■■□□□ 1.54
RNF40-205ENST00000563909 LAMC1P11047 1609 aa24.68■■□□□ 1.54
RNF40-205ENST00000563909 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
RNF40-205ENST00000563909 APLP2Q06481 763 aa24.68■■□□□ 1.54
RNF40-205ENST00000563909 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
RNF40-205ENST00000563909 SF3B2Q13435 895 aaKnown RBP24.64■■□□□ 1.54
RNF40-205ENST00000563909 FAM50AQ14320 339 aaKnown RBP24.64■■□□□ 1.54
RNF40-205ENST00000563909 LRP5O75197 1615 aa24.64■■□□□ 1.53
RNF40-205ENST00000563909 COL22A1Q8NFW1 1626 aaPredicted RBP24.63■■□□□ 1.53
RNF40-205ENST00000563909 MYOM2P54296 1465 aa24.62■■□□□ 1.53
RNF40-205ENST00000563909 PSDA5PKW4 1024 aaPredicted RBP24.58■■□□□ 1.53
RNF40-205ENST00000563909 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
RNF40-205ENST00000563909 UNC5CLQ8IV45 518 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms