RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 CAMSAP1Q5T5Y3 1602 aa26.52■■□□□ 1.84
CDH5-204ENST00000563425 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
CDH5-204ENST00000563425 WASHC2CQ9Y4E1 1318 aa26.51■■□□□ 1.83
CDH5-204ENST00000563425 RAPGEF3O95398 923 aa26.51■■□□□ 1.83
CDH5-204ENST00000563425 BCANQ96GW7 911 aa26.51■■□□□ 1.83
CDH5-204ENST00000563425 NRXN1Q9ULB1 1477 aa26.5■■□□□ 1.83
CDH5-204ENST00000563425 PPLO60437 1756 aa26.5■■□□□ 1.83
CDH5-204ENST00000563425 GGT6Q6P531 493 aa26.48■■□□□ 1.83
CDH5-204ENST00000563425 LRPPRCP42704 1394 aaKnown RBP26.48■■□□□ 1.83
CDH5-204ENST00000563425 CYB5RLQ6IPT4 315 aa26.47■■□□□ 1.83
CDH5-204ENST00000563425 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
CDH5-204ENST00000563425 SIGLEC1Q9BZZ2 1709 aa26.46■■□□□ 1.83
CDH5-204ENST00000563425 ZC3H13Q5T200 1668 aaKnown RBP26.46■■□□□ 1.83
CDH5-204ENST00000563425 PANK3Q9H999 370 aa26.45■■□□□ 1.83
CDH5-204ENST00000563425 SYNMO15061 1565 aa26.44■■□□□ 1.82
CDH5-204ENST00000563425 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
CDH5-204ENST00000563425 MYOM1P52179 1685 aa26.43■■□□□ 1.82
CDH5-204ENST00000563425 NLRP13Q86W25 1043 aa26.43■■□□□ 1.82
CDH5-204ENST00000563425 KDM5AP29375 1690 aaKnown RBP26.42■■□□□ 1.82
CDH5-204ENST00000563425 PIK3C2BO00750 1634 aa26.42■■□□□ 1.82
CDH5-204ENST00000563425 CDCA8Q53HL2 280 aa26.41■■□□□ 1.82
CDH5-204ENST00000563425 CFAP70Q5T0N1 1121 aa26.41■■□□□ 1.82
CDH5-204ENST00000563425 DIP2BQ9P265 1576 aa26.41■■□□□ 1.82
CDH5-204ENST00000563425 SETBP1Q9Y6X0 1596 aa26.41■■□□□ 1.82
CDH5-204ENST00000563425 MYO3AQ8NEV4 1616 aa26.41■■□□□ 1.82
CDH5-204ENST00000563425 NOS1P29475 1434 aa26.4■■□□□ 1.82
CDH5-204ENST00000563425 SMG6Q86US8 1419 aaKnown RBP26.38■■□□□ 1.81
CDH5-204ENST00000563425 ZMYM4Q5VZL5 1548 aa26.38■■□□□ 1.81
CDH5-204ENST00000563425 YEATS2Q9ULM3 1422 aa26.37■■□□□ 1.81
CDH5-204ENST00000563425 ARHGAP31Q2M1Z3 1444 aa26.36■■□□□ 1.81
CDH5-204ENST00000563425 CC2D1BQ5T0F9 858 aaKnown RBP26.34■■□□□ 1.81
CDH5-204ENST00000563425 PIK3C2GO75747 1445 aa26.34■■□□□ 1.81
CDH5-204ENST00000563425 SLC24A1O60721 1099 aa26.33■■□□□ 1.81
CDH5-204ENST00000563425 ERICH6BQ5W0A0 696 aa26.33■■□□□ 1.81
CDH5-204ENST00000563425 TSPOAP1O95153 1857 aa26.33■■□□□ 1.81
CDH5-204ENST00000563425 RPGRIP1LQ68CZ1 1315 aa26.33■■□□□ 1.81
CDH5-204ENST00000563425 CHGAP10645 457 aaKnown RBP26.33■■□□□ 1.81
CDH5-204ENST00000563425 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
CDH5-204ENST00000563425 IRX6P78412 446 aaPredicted RBP26.29■■□□□ 1.8
CDH5-204ENST00000563425 FAM69CQ0P6D2 419 aa26.29■■□□□ 1.8
CDH5-204ENST00000563425 NUDCQ9Y266 331 aa26.29■■□□□ 1.8
CDH5-204ENST00000563425 SBNO2Q9Y2G9 1366 aa26.28■■□□□ 1.8
CDH5-204ENST00000563425 ADGRB1O14514 1584 aa26.27■■□□□ 1.8
CDH5-204ENST00000563425 ASXL1Q8IXJ9 1541 aa26.27■■□□□ 1.8
CDH5-204ENST00000563425 KNSTRNQ9Y448 316 aa26.27■■□□□ 1.8
CDH5-204ENST00000563425 INSRP06213 1382 aa26.27■■□□□ 1.8
CDH5-204ENST00000563425 PREX1Q8TCU6 1659 aa26.27■■□□□ 1.8
CDH5-204ENST00000563425 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
CDH5-204ENST00000563425 NEXMIFQ5QGS0 1516 aa26.25■■□□□ 1.79
CDH5-204ENST00000563425 QRICH2Q9H0J4 1663 aa26.25■■□□□ 1.79
CDH5-204ENST00000563425 MYO5BQ9ULV0 1848 aa26.25■■□□□ 1.79
CDH5-204ENST00000563425 AMER1Q5JTC6 1135 aaPredicted RBP26.24■■□□□ 1.79
CDH5-204ENST00000563425 TSHZ2Q9NRE2 1034 aa26.24■■□□□ 1.79
CDH5-204ENST00000563425 NPC1L1Q9UHC9 1359 aa26.23■■□□□ 1.79
CDH5-204ENST00000563425 REREQ9P2R6 1566 aa26.22■■□□□ 1.79
CDH5-204ENST00000563425 BLMP54132 1417 aaPredicted RBP26.2■■□□□ 1.78
CDH5-204ENST00000563425 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
CDH5-204ENST00000563425 TMEM131LA2VDJ0 1609 aa26.17■■□□□ 1.78
CDH5-204ENST00000563425 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
CDH5-204ENST00000563425 SENP3-EIF4A1A0A087X0R7 540 aa26.17■■□□□ 1.78
CDH5-204ENST00000563425 SLC52A1Q9NWF4 448 aa26.17■■□□□ 1.78
CDH5-204ENST00000563425 PPP4R2Q9NY27 417 aa26.17■■□□□ 1.78
CDH5-204ENST00000563425 ARHGEF28Q8N1W1 1705 aaKnown RBP26.16■■□□□ 1.78
CDH5-204ENST00000563425 VGFO15240 615 aaPredicted RBP26.16■■□□□ 1.78
CDH5-204ENST00000563425 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
CDH5-204ENST00000563425 IDI1Q13907 227 aa26.16■■□□□ 1.78
CDH5-204ENST00000563425 AGLP35573 1532 aa26.15■■□□□ 1.78
CDH5-204ENST00000563425 KIF13AQ9H1H9 1805 aa26.15■■□□□ 1.78
CDH5-204ENST00000563425 ZFYVE9O95405 1425 aa26.15■■□□□ 1.78
CDH5-204ENST00000563425 TRAK1Q9UPV9 953 aa26.13■■□□□ 1.77
CDH5-204ENST00000563425 TMEM132EQ6IEE7 984 aa26.11■■□□□ 1.77
CDH5-204ENST00000563425 PDE3BQ13370 1112 aa26.1■■□□□ 1.77
CDH5-204ENST00000563425 CLTCQ00610 1675 aaKnown RBP26.08■■□□□ 1.77
CDH5-204ENST00000563425 NUTM2DQ5VT03 806 aaPredicted RBP26.06■■□□□ 1.76
CDH5-204ENST00000563425 CARD14Q9BXL6 1004 aa26.06■■□□□ 1.76
CDH5-204ENST00000563425 PPP6R1Q9UPN7 881 aa26.06■■□□□ 1.76
CDH5-204ENST00000563425 ADAMTS8Q9UP79 889 aa26.03■■□□□ 1.76
CDH5-204ENST00000563425 SALL2Q9Y467 1007 aaPredicted RBP26.02■■□□□ 1.76
CDH5-204ENST00000563425 ARHGEF40Q8TER5 1519 aa26.02■■□□□ 1.76
CDH5-204ENST00000563425 USP32Q8NFA0 1604 aa26.02■■□□□ 1.76
CDH5-204ENST00000563425 FBXO31Q5XUX0 539 aaPredicted RBP26■■□□□ 1.75
CDH5-204ENST00000563425 TULP4Q9NRJ4 1543 aa26■■□□□ 1.75
CDH5-204ENST00000563425 WDR43Q15061 677 aaKnown RBP eCLIP26■■□□□ 1.75
CDH5-204ENST00000563425 PUS7Q96PZ0 661 aaKnown RBP26■■□□□ 1.75
CDH5-204ENST00000563425 SPATA31D1Q6ZQQ2 1576 aa25.98■■□□□ 1.75
CDH5-204ENST00000563425 NSD3Q9BZ95 1437 aa25.96■■□□□ 1.75
CDH5-204ENST00000563425 EVC2Q86UK5 1308 aa25.95■■□□□ 1.75
CDH5-204ENST00000563425 B4GALNT3Q6L9W6 998 aa25.94■■□□□ 1.74
CDH5-204ENST00000563425 SLC12A5Q9H2X9 1139 aa25.94■■□□□ 1.74
CDH5-204ENST00000563425 CDCA7LQ96GN5 454 aa25.94■■□□□ 1.74
CDH5-204ENST00000563425 RCAN3Q9UKA8 241 aa25.94■■□□□ 1.74
CDH5-204ENST00000563425 ALKQ9UM73 1620 aa25.92■■□□□ 1.74
CDH5-204ENST00000563425 PTPRMP28827 1452 aa25.91■■□□□ 1.74
CDH5-204ENST00000563425 RRP1P56182 461 aaKnown RBP25.9■■□□□ 1.74
CDH5-204ENST00000563425 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
CDH5-204ENST00000563425 A2ML1A8K2U0 1454 aa25.88■■□□□ 1.73
CDH5-204ENST00000563425 PLEKHH1Q9ULM0 1364 aa25.87■■□□□ 1.73
CDH5-204ENST00000563425 POLR3AO14802 1390 aaPredicted RBP25.86■■□□□ 1.73
CDH5-204ENST00000563425 ANKRD36BQ8N2N9 1353 aa25.86■■□□□ 1.73
CDH5-204ENST00000563425 SHPRHQ149N8 1683 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms