RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 MYO5BQ9ULV0 1848 aa22.73■■□□□ 1.23
SPG7-204ENST00000561911 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
SPG7-204ENST00000561911 TXNDC2Q86VQ3 553 aa22.73■■□□□ 1.23
SPG7-204ENST00000561911 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
SPG7-204ENST00000561911 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
SPG7-204ENST00000561911 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
SPG7-204ENST00000561911 LTKP29376 864 aa22.72■■□□□ 1.23
SPG7-204ENST00000561911 SCAF11Q99590 1463 aaKnown RBP22.72■■□□□ 1.23
SPG7-204ENST00000561911 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
SPG7-204ENST00000561911 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
SPG7-204ENST00000561911 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
SPG7-204ENST00000561911 L3MBTL2Q969R5 705 aa22.7■■□□□ 1.22
SPG7-204ENST00000561911 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
SPG7-204ENST00000561911 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
SPG7-204ENST00000561911 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
SPG7-204ENST00000561911 STAC3Q96MF2 364 aa22.66■■□□□ 1.22
SPG7-204ENST00000561911 MYOM2P54296 1465 aa22.66■■□□□ 1.22
SPG7-204ENST00000561911 TIMELESSQ9UNS1 1208 aa22.65■■□□□ 1.22
SPG7-204ENST00000561911 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
SPG7-204ENST00000561911 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
SPG7-204ENST00000561911 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.22
SPG7-204ENST00000561911 PPLO60437 1756 aa22.64■■□□□ 1.22
SPG7-204ENST00000561911 MED14O60244 1454 aa22.63■■□□□ 1.21
SPG7-204ENST00000561911 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
SPG7-204ENST00000561911 IFT172Q9UG01 1749 aa22.62■■□□□ 1.21
SPG7-204ENST00000561911 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
SPG7-204ENST00000561911 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
SPG7-204ENST00000561911 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
SPG7-204ENST00000561911 BCANQ96GW7 911 aa22.59■■□□□ 1.21
SPG7-204ENST00000561911 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
SPG7-204ENST00000561911 STRCQ7RTU9 1775 aa22.58■■□□□ 1.2
SPG7-204ENST00000561911 SETBP1Q9Y6X0 1596 aa22.57■■□□□ 1.2
SPG7-204ENST00000561911 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
SPG7-204ENST00000561911 DMRT2Q9Y5R5 561 aa22.56■■□□□ 1.2
SPG7-204ENST00000561911 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
SPG7-204ENST00000561911 SLC26A8Q96RN1 970 aa22.54■■□□□ 1.2
SPG7-204ENST00000561911 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
SPG7-204ENST00000561911 NRXN3Q9Y4C0 1643 aa22.53■■□□□ 1.2
SPG7-204ENST00000561911 TBX22Q9Y458 520 aa22.52■■□□□ 1.2
SPG7-204ENST00000561911 C14orf93Q9H972 538 aaKnown RBP22.51■■□□□ 1.19
SPG7-204ENST00000561911 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SPG7-204ENST00000561911 CFAP70Q5T0N1 1121 aa22.5■■□□□ 1.19
SPG7-204ENST00000561911 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
SPG7-204ENST00000561911 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
SPG7-204ENST00000561911 METP08581 1390 aa22.46■■□□□ 1.19
SPG7-204ENST00000561911 LAMC1P11047 1609 aa22.45■■□□□ 1.18
SPG7-204ENST00000561911 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
SPG7-204ENST00000561911 ASXL1Q8IXJ9 1541 aa22.43■■□□□ 1.18
SPG7-204ENST00000561911 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
SPG7-204ENST00000561911 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
SPG7-204ENST00000561911 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
SPG7-204ENST00000561911 NBPF1Q3BBV0 1214 aa22.41■■□□□ 1.18
SPG7-204ENST00000561911 ADGRB1O14514 1584 aa22.41■■□□□ 1.18
SPG7-204ENST00000561911 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
SPG7-204ENST00000561911 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
SPG7-204ENST00000561911 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.18
SPG7-204ENST00000561911 TRPM1Q7Z4N2 1603 aa22.39■■□□□ 1.18
SPG7-204ENST00000561911 KCNA6P17658 529 aa22.39■■□□□ 1.17
SPG7-204ENST00000561911 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.17
SPG7-204ENST00000561911 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
SPG7-204ENST00000561911 GPRASP1Q5JY77 1395 aa22.38■■□□□ 1.17
SPG7-204ENST00000561911 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
SPG7-204ENST00000561911 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
SPG7-204ENST00000561911 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
SPG7-204ENST00000561911 STK26Q9P289 416 aa22.35■■□□□ 1.17
SPG7-204ENST00000561911 NWD1Q149M9 1564 aa22.34■■□□□ 1.17
SPG7-204ENST00000561911 ABCC11Q96J66 1382 aa22.34■■□□□ 1.17
SPG7-204ENST00000561911 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.17
SPG7-204ENST00000561911 TECPR2O15040 1411 aa22.32■■□□□ 1.16
SPG7-204ENST00000561911 XRN1Q8IZH2 1706 aaKnown RBP22.32■■□□□ 1.16
SPG7-204ENST00000561911 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
SPG7-204ENST00000561911 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
SPG7-204ENST00000561911 PTCH1Q13635 1447 aa22.3■■□□□ 1.16
SPG7-204ENST00000561911 CHD2O14647 1828 aaKnown RBP22.29■■□□□ 1.16
SPG7-204ENST00000561911 ROBO2Q9HCK4 1378 aa22.29■■□□□ 1.16
SPG7-204ENST00000561911 DLC1Q96QB1 1528 aa22.28■■□□□ 1.16
SPG7-204ENST00000561911 CPS1P31327 1500 aa22.27■■□□□ 1.16
SPG7-204ENST00000561911 SIRT1Q96EB6 747 aa22.27■■□□□ 1.16
SPG7-204ENST00000561911 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
SPG7-204ENST00000561911 LTBP4Q8N2S1 1624 aa22.26■■□□□ 1.15
SPG7-204ENST00000561911 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
SPG7-204ENST00000561911 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
SPG7-204ENST00000561911 KNDC1Q76NI1 1749 aa22.25■■□□□ 1.15
SPG7-204ENST00000561911 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
SPG7-204ENST00000561911 TMEM94Q12767 1356 aa22.23■■□□□ 1.15
SPG7-204ENST00000561911 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
SPG7-204ENST00000561911 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
SPG7-204ENST00000561911 LRRC7Q96NW7 1537 aa22.22■■□□□ 1.15
SPG7-204ENST00000561911 WAPLQ7Z5K2 1190 aa22.22■■□□□ 1.15
SPG7-204ENST00000561911 POGKQ9P215 609 aa22.22■■□□□ 1.15
SPG7-204ENST00000561911 USP47Q96K76 1375 aa22.22■■□□□ 1.15
SPG7-204ENST00000561911 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
SPG7-204ENST00000561911 CENPJQ9HC77 1338 aaPredicted RBP22.19■■□□□ 1.14
SPG7-204ENST00000561911 ARHGEF28Q8N1W1 1705 aaKnown RBP22.18■■□□□ 1.14
SPG7-204ENST00000561911 NCOA3Q9Y6Q9 1424 aa22.18■■□□□ 1.14
SPG7-204ENST00000561911 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
SPG7-204ENST00000561911 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
SPG7-204ENST00000561911 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
SPG7-204ENST00000561911 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.14
SPG7-204ENST00000561911 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms