RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LMTK2Q8IWU2 1503 aa18.57■□□□□ 0.56
RABGGTA-220ENST00000560998 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-220ENST00000560998 MYBBP1AQ9BQG0 1328 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-220ENST00000560998 MLH3Q9UHC1 1453 aa18.56■□□□□ 0.56
RABGGTA-220ENST00000560998 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
RABGGTA-220ENST00000560998 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-220ENST00000560998 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
RABGGTA-220ENST00000560998 HECW2Q9P2P5 1572 aa18.55■□□□□ 0.56
RABGGTA-220ENST00000560998 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
RABGGTA-220ENST00000560998 TMF1P82094 1093 aa18.54■□□□□ 0.56
RABGGTA-220ENST00000560998 TMC1Q8TDI8 760 aa18.54■□□□□ 0.56
RABGGTA-220ENST00000560998 FRMPD1Q5SYB0 1578 aa18.54■□□□□ 0.56
RABGGTA-220ENST00000560998 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
RABGGTA-220ENST00000560998 KIF1BO60333 1816 aa18.53■□□□□ 0.56
RABGGTA-220ENST00000560998 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
RABGGTA-220ENST00000560998 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
RABGGTA-220ENST00000560998 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.55
RABGGTA-220ENST00000560998 LRPPRCP42704 1394 aaKnown RBP18.51■□□□□ 0.55
RABGGTA-220ENST00000560998 MYOM2P54296 1465 aa18.5■□□□□ 0.55
RABGGTA-220ENST00000560998 NEO1Q92859 1461 aa18.5■□□□□ 0.55
RABGGTA-220ENST00000560998 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
RABGGTA-220ENST00000560998 IFT172Q9UG01 1749 aa18.5■□□□□ 0.55
RABGGTA-220ENST00000560998 ABCA6Q8N139 1617 aa18.5■□□□□ 0.55
RABGGTA-220ENST00000560998 NEFMP07197 916 aa18.5■□□□□ 0.55
RABGGTA-220ENST00000560998 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
RABGGTA-220ENST00000560998 RTN4Q9NQC3 1192 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-220ENST00000560998 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
RABGGTA-220ENST00000560998 PANK3Q9H999 370 aa18.48■□□□□ 0.55
RABGGTA-220ENST00000560998 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-220ENST00000560998 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
RABGGTA-220ENST00000560998 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
RABGGTA-220ENST00000560998 ADGRB3O60242 1522 aa18.45■□□□□ 0.54
RABGGTA-220ENST00000560998 NPATQ14207 1427 aa18.44■□□□□ 0.54
RABGGTA-220ENST00000560998 NRXN1Q9ULB1 1477 aa18.43■□□□□ 0.54
RABGGTA-220ENST00000560998 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
RABGGTA-220ENST00000560998 ABCC3O15438 1527 aa18.43■□□□□ 0.54
RABGGTA-220ENST00000560998 MS4A1P11836 297 aa18.42■□□□□ 0.54
RABGGTA-220ENST00000560998 ADGRF5Q8IZF2 1346 aa18.42■□□□□ 0.54
RABGGTA-220ENST00000560998 SYNMO15061 1565 aa18.42■□□□□ 0.54
RABGGTA-220ENST00000560998 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
RABGGTA-220ENST00000560998 RICTORQ6R327 1708 aa18.41■□□□□ 0.54
RABGGTA-220ENST00000560998 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
RABGGTA-220ENST00000560998 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
RABGGTA-220ENST00000560998 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-220ENST00000560998 GGT6Q6P531 493 aa18.41■□□□□ 0.54
RABGGTA-220ENST00000560998 CFAP65Q6ZU64 1925 aaKnown RBP18.4■□□□□ 0.54
RABGGTA-220ENST00000560998 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
RABGGTA-220ENST00000560998 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
RABGGTA-220ENST00000560998 CAMSAP1Q5T5Y3 1602 aa18.39■□□□□ 0.53
RABGGTA-220ENST00000560998 MYOM1P52179 1685 aa18.39■□□□□ 0.53
RABGGTA-220ENST00000560998 PPLO60437 1756 aa18.38■□□□□ 0.53
RABGGTA-220ENST00000560998 GSE1Q14687 1217 aa18.38■□□□□ 0.53
RABGGTA-220ENST00000560998 GLI2P10070 1586 aa18.37■□□□□ 0.53
RABGGTA-220ENST00000560998 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-220ENST00000560998 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
RABGGTA-220ENST00000560998 NOS1P29475 1434 aa18.37■□□□□ 0.53
RABGGTA-220ENST00000560998 MYO3AQ8NEV4 1616 aa18.36■□□□□ 0.53
RABGGTA-220ENST00000560998 SETBP1Q9Y6X0 1596 aa18.35■□□□□ 0.53
RABGGTA-220ENST00000560998 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-220ENST00000560998 SIGLEC1Q9BZZ2 1709 aa18.35■□□□□ 0.53
RABGGTA-220ENST00000560998 INSRP06213 1382 aa18.35■□□□□ 0.53
RABGGTA-220ENST00000560998 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
RABGGTA-220ENST00000560998 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
RABGGTA-220ENST00000560998 PDE4AP27815 886 aa18.33■□□□□ 0.53
RABGGTA-220ENST00000560998 BACH2Q9BYV9 841 aa18.33■□□□□ 0.53
RABGGTA-220ENST00000560998 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
RABGGTA-220ENST00000560998 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-220ENST00000560998 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.52
RABGGTA-220ENST00000560998 PIK3C2BO00750 1634 aa18.33■□□□□ 0.52
RABGGTA-220ENST00000560998 ERVK-7P63135 1459 aa18.33■□□□□ 0.52
RABGGTA-220ENST00000560998 ZC3H13Q5T200 1668 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-220ENST00000560998 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
RABGGTA-220ENST00000560998 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-220ENST00000560998 ASXL1Q8IXJ9 1541 aa18.32■□□□□ 0.52
RABGGTA-220ENST00000560998 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
RABGGTA-220ENST00000560998 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
RABGGTA-220ENST00000560998 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
RABGGTA-220ENST00000560998 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
RABGGTA-220ENST00000560998 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
RABGGTA-220ENST00000560998 BLMP54132 1417 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-220ENST00000560998 YEATS2Q9ULM3 1422 aa18.3■□□□□ 0.52
RABGGTA-220ENST00000560998 BRPF3Q9ULD4 1205 aa18.3■□□□□ 0.52
RABGGTA-220ENST00000560998 ARHGAP31Q2M1Z3 1444 aa18.3■□□□□ 0.52
RABGGTA-220ENST00000560998 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
RABGGTA-220ENST00000560998 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
RABGGTA-220ENST00000560998 FAM43AQ8N2R8 423 aa18.29■□□□□ 0.52
RABGGTA-220ENST00000560998 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
RABGGTA-220ENST00000560998 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-220ENST00000560998 ADGRB1O14514 1584 aa18.28■□□□□ 0.52
RABGGTA-220ENST00000560998 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
RABGGTA-220ENST00000560998 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
RABGGTA-220ENST00000560998 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-220ENST00000560998 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
RABGGTA-220ENST00000560998 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
RABGGTA-220ENST00000560998 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
RABGGTA-220ENST00000560998 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-220ENST00000560998 QRICH2Q9H0J4 1663 aa18.24■□□□□ 0.51
RABGGTA-220ENST00000560998 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
RABGGTA-220ENST00000560998 FAM69CQ0P6D2 419 aa18.21■□□□□ 0.51
RABGGTA-220ENST00000560998 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms