RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 MED14O60244 1454 aa24.54■■□□□ 1.52
RPL28-211ENST00000560881 ANKRD30BQ9BXX2 1392 aa24.53■■□□□ 1.52
RPL28-211ENST00000560881 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
RPL28-211ENST00000560881 EID1Q9Y6B2 187 aa24.52■■□□□ 1.52
RPL28-211ENST00000560881 ZNF326Q5BKZ1 582 aaKnown RBP24.51■■□□□ 1.51
RPL28-211ENST00000560881 DMRT2Q9Y5R5 561 aa24.51■■□□□ 1.51
RPL28-211ENST00000560881 NEXMIFQ5QGS0 1516 aa24.5■■□□□ 1.51
RPL28-211ENST00000560881 DHX57Q6P158 1386 aaKnown RBP24.48■■□□□ 1.51
RPL28-211ENST00000560881 SPATA31E1Q6ZUB1 1445 aa24.47■■□□□ 1.51
RPL28-211ENST00000560881 PPP1R15AO75807 674 aaPredicted RBP24.46■■□□□ 1.51
RPL28-211ENST00000560881 PPLO60437 1756 aa24.45■■□□□ 1.5
RPL28-211ENST00000560881 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
RPL28-211ENST00000560881 IFT172Q9UG01 1749 aa24.42■■□□□ 1.5
RPL28-211ENST00000560881 ZNF335Q9H4Z2 1342 aaPredicted RBP24.42■■□□□ 1.5
RPL28-211ENST00000560881 PLEKHG1Q9ULL1 1385 aa24.41■■□□□ 1.5
RPL28-211ENST00000560881 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.41■■□□□ 1.5
RPL28-211ENST00000560881 SLC26A8Q96RN1 970 aa24.4■■□□□ 1.5
RPL28-211ENST00000560881 NRXN3Q9Y4C0 1643 aa24.4■■□□□ 1.5
RPL28-211ENST00000560881 BCANQ96GW7 911 aa24.4■■□□□ 1.5
RPL28-211ENST00000560881 HDGFP51858 240 aaKnown RBP24.39■■□□□ 1.49
RPL28-211ENST00000560881 STRCP1A6NGW2 1772 aa24.38■■□□□ 1.49
RPL28-211ENST00000560881 LTBP4Q8N2S1 1624 aa24.37■■□□□ 1.49
RPL28-211ENST00000560881 ADAMTS13Q76LX8 1427 aa24.36■■□□□ 1.49
RPL28-211ENST00000560881 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
RPL28-211ENST00000560881 RPGRIP1LQ68CZ1 1315 aa24.34■■□□□ 1.49
RPL28-211ENST00000560881 SIN3AQ96ST3 1273 aa24.32■■□□□ 1.48
RPL28-211ENST00000560881 ADGRF5Q8IZF2 1346 aa24.31■■□□□ 1.48
RPL28-211ENST00000560881 DIP2AQ14689 1571 aa24.3■■□□□ 1.48
RPL28-211ENST00000560881 VGFO15240 615 aaPredicted RBP24.29■■□□□ 1.48
RPL28-211ENST00000560881 SETD1AO15047 1707 aaKnown RBP24.29■■□□□ 1.48
RPL28-211ENST00000560881 CHD2O14647 1828 aaKnown RBP24.27■■□□□ 1.48
RPL28-211ENST00000560881 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
RPL28-211ENST00000560881 ALKQ9UM73 1620 aa24.25■■□□□ 1.47
RPL28-211ENST00000560881 TBX22Q9Y458 520 aa24.25■■□□□ 1.47
RPL28-211ENST00000560881 MYOM2P54296 1465 aa24.25■■□□□ 1.47
RPL28-211ENST00000560881 NWD1Q149M9 1564 aa24.24■■□□□ 1.47
RPL28-211ENST00000560881 PIK3C2GO75747 1445 aa24.23■■□□□ 1.47
RPL28-211ENST00000560881 METP08581 1390 aa24.23■■□□□ 1.47
RPL28-211ENST00000560881 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
RPL28-211ENST00000560881 KDM2AQ9Y2K7 1162 aa24.23■■□□□ 1.47
RPL28-211ENST00000560881 CPS1P31327 1500 aa24.23■■□□□ 1.47
RPL28-211ENST00000560881 PTPRUQ92729 1446 aa24.22■■□□□ 1.47
RPL28-211ENST00000560881 NRXN1Q9ULB1 1477 aa24.21■■□□□ 1.47
RPL28-211ENST00000560881 CERKQ8TCT0 537 aa24.21■■□□□ 1.47
RPL28-211ENST00000560881 XIRP1Q702N8 1843 aaKnown RBP24.19■■□□□ 1.46
RPL28-211ENST00000560881 KCNA6P17658 529 aa24.19■■□□□ 1.46
RPL28-211ENST00000560881 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
RPL28-211ENST00000560881 XRN1Q8IZH2 1706 aaKnown RBP24.18■■□□□ 1.46
RPL28-211ENST00000560881 ASXL1Q8IXJ9 1541 aa24.17■■□□□ 1.46
RPL28-211ENST00000560881 RBM33Q96EV2 1170 aaKnown RBP24.17■■□□□ 1.46
RPL28-211ENST00000560881 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
RPL28-211ENST00000560881 NKTRP30414 1462 aaKnown RBP24.15■■□□□ 1.46
RPL28-211ENST00000560881 L3MBTL2Q969R5 705 aa24.15■■□□□ 1.46
RPL28-211ENST00000560881 AMOTL2Q9Y2J4 779 aa24.14■■□□□ 1.45
RPL28-211ENST00000560881 CFAP70Q5T0N1 1121 aa24.13■■□□□ 1.45
RPL28-211ENST00000560881 LAMC1P11047 1609 aa24.13■■□□□ 1.45
RPL28-211ENST00000560881 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
RPL28-211ENST00000560881 TMEM94Q12767 1356 aa24.1■■□□□ 1.45
RPL28-211ENST00000560881 PROSER2Q86WR7 435 aaPredicted RBP24.09■■□□□ 1.45
RPL28-211ENST00000560881 C14orf93Q9H972 538 aaKnown RBP24.09■■□□□ 1.45
RPL28-211ENST00000560881 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
RPL28-211ENST00000560881 CCER1Q8TC90 406 aaPredicted RBP24.08■■□□□ 1.45
RPL28-211ENST00000560881 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.44
RPL28-211ENST00000560881 TONSLQ96HA7 1378 aa24.05■■□□□ 1.44
RPL28-211ENST00000560881 ADGRB1O14514 1584 aa24.05■■□□□ 1.44
RPL28-211ENST00000560881 STAC3Q96MF2 364 aa24.05■■□□□ 1.44
RPL28-211ENST00000560881 STK26Q9P289 416 aa24.05■■□□□ 1.44
RPL28-211ENST00000560881 KNDC1Q76NI1 1749 aa24.04■■□□□ 1.44
RPL28-211ENST00000560881 ROBO2Q9HCK4 1378 aa24.03■■□□□ 1.44
RPL28-211ENST00000560881 YTHDC2Q9H6S0 1430 aaKnown RBP24.03■■□□□ 1.44
RPL28-211ENST00000560881 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
RPL28-211ENST00000560881 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
RPL28-211ENST00000560881 LRPPRCP42704 1394 aaKnown RBP24.01■■□□□ 1.43
RPL28-211ENST00000560881 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
RPL28-211ENST00000560881 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
RPL28-211ENST00000560881 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
RPL28-211ENST00000560881 TECPR2O15040 1411 aa23.98■■□□□ 1.43
RPL28-211ENST00000560881 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.97■■□□□ 1.43
RPL28-211ENST00000560881 UBAP1LF5GYI3 381 aa23.97■■□□□ 1.43
RPL28-211ENST00000560881 NBPF1Q3BBV0 1214 aa23.97■■□□□ 1.43
RPL28-211ENST00000560881 C14orf37Q86TY3 774 aa23.97■■□□□ 1.43
RPL28-211ENST00000560881 ABCC11Q96J66 1382 aa23.96■■□□□ 1.43
RPL28-211ENST00000560881 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
RPL28-211ENST00000560881 PLEKHH1Q9ULM0 1364 aa23.96■■□□□ 1.43
RPL28-211ENST00000560881 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.42
RPL28-211ENST00000560881 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
RPL28-211ENST00000560881 MSH6P52701 1360 aa23.94■■□□□ 1.42
RPL28-211ENST00000560881 TRAK1Q9UPV9 953 aa23.93■■□□□ 1.42
RPL28-211ENST00000560881 ARHGEF28Q8N1W1 1705 aaKnown RBP23.93■■□□□ 1.42
RPL28-211ENST00000560881 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
RPL28-211ENST00000560881 ADGRL3Q9HAR2 1447 aa23.91■■□□□ 1.42
RPL28-211ENST00000560881 PIP4K2BP78356 416 aa23.9■■□□□ 1.42
RPL28-211ENST00000560881 DLC1Q96QB1 1528 aa23.9■■□□□ 1.42
RPL28-211ENST00000560881 TOM1O60784 492 aa23.89■■□□□ 1.42
RPL28-211ENST00000560881 ILDR1Q86SU0 546 aaPredicted RBP23.89■■□□□ 1.42
RPL28-211ENST00000560881 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.41
RPL28-211ENST00000560881 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.41
RPL28-211ENST00000560881 PRAM1Q96QH2 718 aa23.88■■□□□ 1.41
RPL28-211ENST00000560881 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
RPL28-211ENST00000560881 FAM135BQ49AJ0 1406 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms