RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 TPM2P07951 284 aa15.49■□□□□ 0.07
SYNM-203ENST00000560674 VSIG10Q8N0Z9 540 aa15.49■□□□□ 0.07
SYNM-203ENST00000560674 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
SYNM-203ENST00000560674 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
SYNM-203ENST00000560674 ZKSCAN1P17029 563 aaPredicted RBP15.48■□□□□ 0.07
SYNM-203ENST00000560674 VPS53Q5VIR6 699 aa15.48■□□□□ 0.07
SYNM-203ENST00000560674 CCDC70Q6NSX1 233 aa15.47■□□□□ 0.07
SYNM-203ENST00000560674 ZNF592Q92610 1267 aa15.47■□□□□ 0.07
SYNM-203ENST00000560674 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
SYNM-203ENST00000560674 SYNE3Q6ZMZ3 975 aa15.47■□□□□ 0.07
SYNM-203ENST00000560674 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
SYNM-203ENST00000560674 LRRFIP1Q32MZ4 808 aaKnown RBP15.47■□□□□ 0.07
SYNM-203ENST00000560674 CPLX2Q6PUV4 134 aaKnown RBP15.47■□□□□ 0.07
SYNM-203ENST00000560674 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.07
SYNM-203ENST00000560674 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.07
SYNM-203ENST00000560674 ANO2Q9NQ90 1003 aa15.45■□□□□ 0.06
SYNM-203ENST00000560674 ZNF771Q7L3S4 317 aaPredicted RBP15.45■□□□□ 0.06
SYNM-203ENST00000560674 ROCK1Q13464 1354 aa15.45■□□□□ 0.06
SYNM-203ENST00000560674 PRM3Q9NNZ6 103 aa15.44■□□□□ 0.06
SYNM-203ENST00000560674 VGFO15240 615 aaPredicted RBP15.44■□□□□ 0.06
SYNM-203ENST00000560674 NEXNQ0ZGT2 675 aa15.44■□□□□ 0.06
SYNM-203ENST00000560674 TEFQ10587 303 aa15.44■□□□□ 0.06
SYNM-203ENST00000560674 TRIM29Q14134 588 aa15.44■□□□□ 0.06
SYNM-203ENST00000560674 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
SYNM-203ENST00000560674 C9orf78Q9NZ63 289 aaPredicted RBP15.43■□□□□ 0.06
SYNM-203ENST00000560674 DIAPH1O60610 1272 aaKnown RBP15.43■□□□□ 0.06
SYNM-203ENST00000560674 NUCB2P80303 420 aa15.43■□□□□ 0.06
SYNM-203ENST00000560674 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
SYNM-203ENST00000560674 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
SYNM-203ENST00000560674 INTS3Q68E01 1043 aaKnown RBP15.42■□□□□ 0.06
SYNM-203ENST00000560674 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
SYNM-203ENST00000560674 RIPK4P57078 832 aa15.41■□□□□ 0.06
SYNM-203ENST00000560674 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
SYNM-203ENST00000560674 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
SYNM-203ENST00000560674 CPLX1O14810 134 aa15.41■□□□□ 0.06
SYNM-203ENST00000560674 ANKRD20A12PQ8NF67 263 aa15.41■□□□□ 0.06
SYNM-203ENST00000560674 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
SYNM-203ENST00000560674 HOMER1Q86YM7 354 aa15.4■□□□□ 0.06
SYNM-203ENST00000560674 FAM43AQ8N2R8 423 aa15.4■□□□□ 0.06
SYNM-203ENST00000560674 RUNDC1Q96C34 613 aa15.4■□□□□ 0.06
SYNM-203ENST00000560674 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
SYNM-203ENST00000560674 TEX35Q5T0J7 233 aa15.39■□□□□ 0.05
SYNM-203ENST00000560674 C22orf23Q9BZE7 217 aa15.39■□□□□ 0.05
SYNM-203ENST00000560674 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
SYNM-203ENST00000560674 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
SYNM-203ENST00000560674 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
SYNM-203ENST00000560674 MINK1Q8N4C8 1332 aaPredicted RBP15.39■□□□□ 0.05
SYNM-203ENST00000560674 VPS37CA5D8V6 355 aaPredicted RBP15.38■□□□□ 0.05
SYNM-203ENST00000560674 AAMPQ13685 434 aa15.38■□□□□ 0.05
SYNM-203ENST00000560674 TTC5Q8N0Z6 440 aa15.38■□□□□ 0.05
SYNM-203ENST00000560674 SASS6Q6UVJ0 657 aa15.38■□□□□ 0.05
SYNM-203ENST00000560674 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
SYNM-203ENST00000560674 CCDC7Q96M83 1385 aa15.37■□□□□ 0.05
SYNM-203ENST00000560674 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
SYNM-203ENST00000560674 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
SYNM-203ENST00000560674 AMOTL1Q8IY63 956 aa15.36■□□□□ 0.05
SYNM-203ENST00000560674 LNPKQ9C0E8 428 aa15.36■□□□□ 0.05
SYNM-203ENST00000560674 TRDNQ13061 729 aa15.36■□□□□ 0.05
SYNM-203ENST00000560674 G3BP1Q13283 466 aaKnown RBP eCLIP15.36■□□□□ 0.05
SYNM-203ENST00000560674 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
SYNM-203ENST00000560674 APPP05067 770 aa15.35■□□□□ 0.05
SYNM-203ENST00000560674 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
SYNM-203ENST00000560674 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
SYNM-203ENST00000560674 CNTLNQ9NXG0 1405 aa15.35■□□□□ 0.05
SYNM-203ENST00000560674 GNAI1P63096 354 aa15.35■□□□□ 0.05
SYNM-203ENST00000560674 HSP90AB4PQ58FF6 505 aa15.34■□□□□ 0.05
SYNM-203ENST00000560674 KIF7Q2M1P5 1343 aa15.34■□□□□ 0.05
SYNM-203ENST00000560674 CCDC73Q6ZRK6 1079 aa15.34■□□□□ 0.05
SYNM-203ENST00000560674 NOL10Q9BSC4 688 aaKnown RBP15.34■□□□□ 0.05
SYNM-203ENST00000560674 MRE11P49959 708 aa15.34■□□□□ 0.05
SYNM-203ENST00000560674 IFT57Q9NWB7 429 aa15.33■□□□□ 0.05
SYNM-203ENST00000560674 ERC2O15083 957 aa15.33■□□□□ 0.04
SYNM-203ENST00000560674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
SYNM-203ENST00000560674 CDC45O75419 566 aa15.33■□□□□ 0.04
SYNM-203ENST00000560674 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
SYNM-203ENST00000560674 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
SYNM-203ENST00000560674 PANK1Q8TE04 598 aa15.31■□□□□ 0.04
SYNM-203ENST00000560674 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
SYNM-203ENST00000560674 CCDC39Q9UFE4 941 aa15.31■□□□□ 0.04
SYNM-203ENST00000560674 MNS1Q8NEH6 495 aa15.31■□□□□ 0.04
SYNM-203ENST00000560674 NASPP49321 788 aaPredicted RBP15.31■□□□□ 0.04
SYNM-203ENST00000560674 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
SYNM-203ENST00000560674 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
SYNM-203ENST00000560674 FBXW7Q969H0 707 aa15.3■□□□□ 0.04
SYNM-203ENST00000560674 PATL2C9JE40 543 aaKnown RBP15.3■□□□□ 0.04
SYNM-203ENST00000560674 ERICH2A1L162 156 aa15.3■□□□□ 0.04
SYNM-203ENST00000560674 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
SYNM-203ENST00000560674 TCEAL9Q9UHQ7 104 aa15.29■□□□□ 0.04
SYNM-203ENST00000560674 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
SYNM-203ENST00000560674 SAFBQ15424 915 aaKnown RBP eCLIP15.29■□□□□ 0.04
SYNM-203ENST00000560674 ACBD3Q9H3P7 528 aa15.29■□□□□ 0.04
SYNM-203ENST00000560674 EVA1CP58658 441 aa15.28■□□□□ 0.04
SYNM-203ENST00000560674 BRD4O60885 1362 aaPredicted RBP15.28■□□□□ 0.04
SYNM-203ENST00000560674 RAD21O60216 631 aa15.28■□□□□ 0.04
SYNM-203ENST00000560674 DHX16O60231 1041 aaKnown RBP15.28■□□□□ 0.04
SYNM-203ENST00000560674 FOSBP53539 338 aa15.28■□□□□ 0.04
SYNM-203ENST00000560674 RUFY1Q96T51 708 aa15.28■□□□□ 0.04
SYNM-203ENST00000560674 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
SYNM-203ENST00000560674 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
SYNM-203ENST00000560674 NAT10Q9H0A0 1025 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms