RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 NPHP4O75161 1426 aaPredicted RBP30.74■■■□□ 2.51
SEC23A-213ENST00000557280 SPATA31E1Q6ZUB1 1445 aa30.74■■■□□ 2.51
SEC23A-213ENST00000557280 NUTM2DQ5VT03 806 aaPredicted RBP30.73■■■□□ 2.51
SEC23A-213ENST00000557280 NEXMIFQ5QGS0 1516 aa30.73■■■□□ 2.51
SEC23A-213ENST00000557280 IQGAP1P46940 1657 aa30.72■■■□□ 2.51
SEC23A-213ENST00000557280 ZNF326Q5BKZ1 582 aaKnown RBP30.71■■■□□ 2.51
SEC23A-213ENST00000557280 EID1Q9Y6B2 187 aa30.71■■■□□ 2.51
SEC23A-213ENST00000557280 SENP3Q9H4L4 574 aaPredicted RBP30.68■■■□□ 2.5
SEC23A-213ENST00000557280 DMRT2Q9Y5R5 561 aa30.68■■■□□ 2.5
SEC23A-213ENST00000557280 PPP1R15AO75807 674 aaPredicted RBP30.63■■■□□ 2.49
SEC23A-213ENST00000557280 RGL3Q3MIN7 710 aa30.63■■■□□ 2.49
SEC23A-213ENST00000557280 PPLO60437 1756 aa30.62■■■□□ 2.49
SEC23A-213ENST00000557280 PLEKHG1Q9ULL1 1385 aa30.62■■■□□ 2.49
SEC23A-213ENST00000557280 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.61■■■□□ 2.49
SEC23A-213ENST00000557280 IFT172Q9UG01 1749 aa30.6■■■□□ 2.49
SEC23A-213ENST00000557280 NRXN3Q9Y4C0 1643 aa30.58■■■□□ 2.49
SEC23A-213ENST00000557280 HDGFP51858 240 aaKnown RBP30.57■■■□□ 2.48
SEC23A-213ENST00000557280 RPGRIP1LQ68CZ1 1315 aa30.56■■■□□ 2.48
SEC23A-213ENST00000557280 ZNF335Q9H4Z2 1342 aaPredicted RBP30.55■■■□□ 2.48
SEC23A-213ENST00000557280 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
SEC23A-213ENST00000557280 SIN3AQ96ST3 1273 aa30.55■■■□□ 2.48
SEC23A-213ENST00000557280 ADAMTS13Q76LX8 1427 aa30.55■■■□□ 2.48
SEC23A-213ENST00000557280 SETBP1Q9Y6X0 1596 aa30.53■■■□□ 2.48
SEC23A-213ENST00000557280 BCANQ96GW7 911 aa30.52■■■□□ 2.48
SEC23A-213ENST00000557280 LTBP4Q8N2S1 1624 aa30.5■■■□□ 2.47
SEC23A-213ENST00000557280 ADGRF5Q8IZF2 1346 aa30.49■■■□□ 2.47
SEC23A-213ENST00000557280 STRCP1A6NGW2 1772 aa30.48■■■□□ 2.47
SEC23A-213ENST00000557280 VGFO15240 615 aaPredicted RBP30.47■■■□□ 2.47
SEC23A-213ENST00000557280 DIP2AQ14689 1571 aa30.46■■■□□ 2.47
SEC23A-213ENST00000557280 MYOM2P54296 1465 aa30.45■■■□□ 2.47
SEC23A-213ENST00000557280 NEUROD1Q13562 356 aa30.44■■■□□ 2.46
SEC23A-213ENST00000557280 NRXN1Q9ULB1 1477 aa30.43■■■□□ 2.46
SEC23A-213ENST00000557280 SETD1AO15047 1707 aaKnown RBP30.42■■■□□ 2.46
SEC23A-213ENST00000557280 PIK3C2GO75747 1445 aa30.42■■■□□ 2.46
SEC23A-213ENST00000557280 TBX22Q9Y458 520 aa30.41■■■□□ 2.46
SEC23A-213ENST00000557280 ALKQ9UM73 1620 aa30.4■■■□□ 2.46
SEC23A-213ENST00000557280 DCAF11Q8TEB1 546 aa30.39■■■□□ 2.46
SEC23A-213ENST00000557280 METP08581 1390 aa30.39■■■□□ 2.45
SEC23A-213ENST00000557280 NWD1Q149M9 1564 aa30.38■■■□□ 2.45
SEC23A-213ENST00000557280 KDM2AQ9Y2K7 1162 aa30.38■■■□□ 2.45
SEC23A-213ENST00000557280 PTPRUQ92729 1446 aa30.37■■■□□ 2.45
SEC23A-213ENST00000557280 CHD2O14647 1828 aaKnown RBP30.34■■■□□ 2.45
SEC23A-213ENST00000557280 CPS1P31327 1500 aa30.34■■■□□ 2.45
SEC23A-213ENST00000557280 ASXL1Q8IXJ9 1541 aa30.33■■■□□ 2.45
SEC23A-213ENST00000557280 L3MBTL2Q969R5 705 aa30.33■■■□□ 2.45
SEC23A-213ENST00000557280 KCNA6P17658 529 aa30.32■■■□□ 2.44
SEC23A-213ENST00000557280 XRN1Q8IZH2 1706 aaKnown RBP30.3■■■□□ 2.44
SEC23A-213ENST00000557280 PIK3R4Q99570 1358 aa30.29■■■□□ 2.44
SEC23A-213ENST00000557280 LRRC7Q96NW7 1537 aa30.29■■■□□ 2.44
SEC23A-213ENST00000557280 CERKQ8TCT0 537 aa30.28■■■□□ 2.44
SEC23A-213ENST00000557280 NKTRP30414 1462 aaKnown RBP30.27■■■□□ 2.44
SEC23A-213ENST00000557280 CFAP70Q5T0N1 1121 aa30.27■■■□□ 2.44
SEC23A-213ENST00000557280 CCER1Q8TC90 406 aaPredicted RBP30.27■■■□□ 2.44
SEC23A-213ENST00000557280 LAMC1P11047 1609 aa30.25■■■□□ 2.43
SEC23A-213ENST00000557280 PRAG1Q86YV5 1406 aa30.24■■■□□ 2.43
SEC23A-213ENST00000557280 C14orf93Q9H972 538 aaKnown RBP30.24■■■□□ 2.43
SEC23A-213ENST00000557280 AMOTL2Q9Y2J4 779 aa30.24■■■□□ 2.43
SEC23A-213ENST00000557280 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
SEC23A-213ENST00000557280 XIRP1Q702N8 1843 aaKnown RBP30.22■■■□□ 2.43
SEC23A-213ENST00000557280 TMEM132EQ6IEE7 984 aa30.22■■■□□ 2.43
SEC23A-213ENST00000557280 RBM33Q96EV2 1170 aaKnown RBP30.22■■■□□ 2.43
SEC23A-213ENST00000557280 TONSLQ96HA7 1378 aa30.22■■■□□ 2.43
SEC23A-213ENST00000557280 STAC3Q96MF2 364 aa30.21■■■□□ 2.43
SEC23A-213ENST00000557280 ADGRB1O14514 1584 aa30.2■■■□□ 2.42
SEC23A-213ENST00000557280 TMEM94Q12767 1356 aa30.18■■■□□ 2.42
SEC23A-213ENST00000557280 PROSER2Q86WR7 435 aaPredicted RBP30.16■■■□□ 2.42
SEC23A-213ENST00000557280 IQSEC2Q5JU85 1478 aa30.16■■■□□ 2.42
SEC23A-213ENST00000557280 ROBO2Q9HCK4 1378 aa30.15■■■□□ 2.42
SEC23A-213ENST00000557280 YTHDC2Q9H6S0 1430 aaKnown RBP30.14■■■□□ 2.42
SEC23A-213ENST00000557280 LRPPRCP42704 1394 aaKnown RBP30.14■■■□□ 2.41
SEC23A-213ENST00000557280 PTCH1Q13635 1447 aa30.13■■■□□ 2.41
SEC23A-213ENST00000557280 STK26Q9P289 416 aa30.13■■■□□ 2.41
SEC23A-213ENST00000557280 KNDC1Q76NI1 1749 aa30.12■■■□□ 2.41
SEC23A-213ENST00000557280 KIAA1210Q9ULL0 1709 aa30.12■■■□□ 2.41
SEC23A-213ENST00000557280 NBPF8Q3BBV2 869 aa30.11■■■□□ 2.41
SEC23A-213ENST00000557280 TECPR2O15040 1411 aa30.11■■■□□ 2.41
SEC23A-213ENST00000557280 TRPM1Q7Z4N2 1603 aa30.09■■■□□ 2.41
SEC23A-213ENST00000557280 NBPF1Q3BBV0 1214 aa30.08■■■□□ 2.41
SEC23A-213ENST00000557280 ABCC11Q96J66 1382 aa30.07■■■□□ 2.4
SEC23A-213ENST00000557280 PLEKHH1Q9ULM0 1364 aa30.04■■■□□ 2.4
SEC23A-213ENST00000557280 NALCNQ8IZF0 1738 aa30.03■■■□□ 2.4
SEC23A-213ENST00000557280 NCOA3Q9Y6Q9 1424 aa30.02■■■□□ 2.4
SEC23A-213ENST00000557280 WAPLQ7Z5K2 1190 aa30.01■■■□□ 2.39
SEC23A-213ENST00000557280 DLC1Q96QB1 1528 aa30.01■■■□□ 2.39
SEC23A-213ENST00000557280 TRAK1Q9UPV9 953 aa29.99■■■□□ 2.39
SEC23A-213ENST00000557280 ADGRL3Q9HAR2 1447 aa29.98■■■□□ 2.39
SEC23A-213ENST00000557280 C14orf37Q86TY3 774 aa29.98■■■□□ 2.39
SEC23A-213ENST00000557280 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.98■■■□□ 2.39
SEC23A-213ENST00000557280 MSH6P52701 1360 aa29.98■■■□□ 2.39
SEC23A-213ENST00000557280 FAM135BQ49AJ0 1406 aa29.97■■■□□ 2.39
SEC23A-213ENST00000557280 ARHGEF28Q8N1W1 1705 aaKnown RBP29.97■■■□□ 2.39
SEC23A-213ENST00000557280 UBAP1LF5GYI3 381 aa29.97■■■□□ 2.39
SEC23A-213ENST00000557280 RALGAPBQ86X10 1494 aa29.97■■■□□ 2.39
SEC23A-213ENST00000557280 ROCK2O75116 1388 aaKnown RBP29.96■■■□□ 2.39
SEC23A-213ENST00000557280 PRAM1Q96QH2 718 aa29.94■■■□□ 2.38
SEC23A-213ENST00000557280 TIMELESSQ9UNS1 1208 aa29.94■■■□□ 2.38
SEC23A-213ENST00000557280 FBXO41Q8TF61 875 aa29.92■■■□□ 2.38
SEC23A-213ENST00000557280 C19orf44Q9H6X5 657 aa29.92■■■□□ 2.38
SEC23A-213ENST00000557280 GPRASP1Q5JY77 1395 aa29.91■■■□□ 2.38
SEC23A-213ENST00000557280 SAFB2Q14151 953 aaKnown RBP eCLIP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms