RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 CHGAP10645 457 aaKnown RBP33.56■■■□□ 2.96
PABPN1-206ENST00000556809 HDGFP51858 240 aaKnown RBP33.51■■■□□ 2.95
PABPN1-206ENST00000556809 PLEKHG1Q9ULL1 1385 aa33.5■■■□□ 2.95
PABPN1-206ENST00000556809 ACIN1Q9UKV3 1341 aaKnown RBP33.49■■■□□ 2.95
PABPN1-206ENST00000556809 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.48■■■□□ 2.95
PABPN1-206ENST00000556809 RAB3GAP2Q9H2M9 1393 aa33.47■■■□□ 2.95
PABPN1-206ENST00000556809 MPHOSPH9Q99550 1183 aa33.47■■■□□ 2.95
PABPN1-206ENST00000556809 KIF1BO60333 1816 aa33.46■■■□□ 2.95
PABPN1-206ENST00000556809 SLC26A8Q96RN1 970 aa33.46■■■□□ 2.95
PABPN1-206ENST00000556809 LRRC7Q96NW7 1537 aa33.45■■■□□ 2.95
PABPN1-206ENST00000556809 TRIM26Q12899 539 aaPredicted RBP33.45■■■□□ 2.95
PABPN1-206ENST00000556809 PPP1R15AO75807 674 aaPredicted RBP33.43■■■□□ 2.94
PABPN1-206ENST00000556809 FOXD1Q16676 465 aa33.43■■■□□ 2.94
PABPN1-206ENST00000556809 NUTM2DQ5VT03 806 aaPredicted RBP33.41■■■□□ 2.94
PABPN1-206ENST00000556809 ADAMTS13Q76LX8 1427 aa33.38■■■□□ 2.93
PABPN1-206ENST00000556809 KCNA6P17658 529 aa33.37■■■□□ 2.93
PABPN1-206ENST00000556809 BCANQ96GW7 911 aa33.37■■■□□ 2.93
PABPN1-206ENST00000556809 NWD1Q149M9 1564 aa33.37■■■□□ 2.93
PABPN1-206ENST00000556809 NEXMIFQ5QGS0 1516 aa33.37■■■□□ 2.93
PABPN1-206ENST00000556809 SENP3Q9H4L4 574 aaPredicted RBP33.36■■■□□ 2.93
PABPN1-206ENST00000556809 XIRP1Q702N8 1843 aaKnown RBP33.36■■■□□ 2.93
PABPN1-206ENST00000556809 ZNF326Q5BKZ1 582 aaKnown RBP33.35■■■□□ 2.93
PABPN1-206ENST00000556809 TBX22Q9Y458 520 aa33.35■■■□□ 2.93
PABPN1-206ENST00000556809 CHD2O14647 1828 aaKnown RBP33.35■■■□□ 2.93
PABPN1-206ENST00000556809 UBAP1LF5GYI3 381 aa33.34■■■□□ 2.93
PABPN1-206ENST00000556809 HRCP23327 699 aa33.33■■■□□ 2.93
PABPN1-206ENST00000556809 DIP2AQ14689 1571 aa33.33■■■□□ 2.93
PABPN1-206ENST00000556809 NRXN3Q9Y4C0 1643 aa33.32■■■□□ 2.92
PABPN1-206ENST00000556809 ALKQ9UM73 1620 aa33.3■■■□□ 2.92
PABPN1-206ENST00000556809 SETBP1Q9Y6X0 1596 aa33.3■■■□□ 2.92
PABPN1-206ENST00000556809 CCDC144AA2RUR9 1427 aa33.28■■■□□ 2.92
PABPN1-206ENST00000556809 NKTRP30414 1462 aaKnown RBP33.27■■■□□ 2.92
PABPN1-206ENST00000556809 PIK3R4Q99570 1358 aa33.24■■■□□ 2.91
PABPN1-206ENST00000556809 RPGRIP1LQ68CZ1 1315 aa33.24■■■□□ 2.91
PABPN1-206ENST00000556809 PPLO60437 1756 aa33.24■■■□□ 2.91
PABPN1-206ENST00000556809 TOM1O60784 492 aa33.23■■■□□ 2.91
PABPN1-206ENST00000556809 SPATA31E1Q6ZUB1 1445 aa33.22■■■□□ 2.91
PABPN1-206ENST00000556809 TMEM94Q12767 1356 aa33.21■■■□□ 2.91
PABPN1-206ENST00000556809 PROSER2Q86WR7 435 aaPredicted RBP33.19■■■□□ 2.9
PABPN1-206ENST00000556809 PTPRUQ92729 1446 aa33.17■■■□□ 2.9
PABPN1-206ENST00000556809 VGFO15240 615 aaPredicted RBP33.16■■■□□ 2.9
PABPN1-206ENST00000556809 RBM33Q96EV2 1170 aaKnown RBP33.14■■■□□ 2.9
PABPN1-206ENST00000556809 IFT172Q9UG01 1749 aa33.14■■■□□ 2.89
PABPN1-206ENST00000556809 METP08581 1390 aa33.12■■■□□ 2.89
PABPN1-206ENST00000556809 ANKRD30BQ9BXX2 1392 aa33.12■■■□□ 2.89
PABPN1-206ENST00000556809 SETD1AO15047 1707 aaKnown RBP33.12■■■□□ 2.89
PABPN1-206ENST00000556809 PIP4K2BP78356 416 aa33.12■■■□□ 2.89
PABPN1-206ENST00000556809 XRN1Q8IZH2 1706 aaKnown RBP33.11■■■□□ 2.89
PABPN1-206ENST00000556809 AMOTL2Q9Y2J4 779 aa33.1■■■□□ 2.89
PABPN1-206ENST00000556809 RGL3Q3MIN7 710 aa33.09■■■□□ 2.89
PABPN1-206ENST00000556809 NCOA3Q9Y6Q9 1424 aa33.07■■■□□ 2.88
PABPN1-206ENST00000556809 SCAF1Q9H7N4 1312 aaKnown RBP33.05■■■□□ 2.88
PABPN1-206ENST00000556809 ADGRF5Q8IZF2 1346 aa33.02■■■□□ 2.88
PABPN1-206ENST00000556809 PCGF6Q9BYE7 350 aa33.01■■■□□ 2.87
PABPN1-206ENST00000556809 MSH6P52701 1360 aa33■■■□□ 2.87
PABPN1-206ENST00000556809 HSPA1LP34931 641 aa32.98■■■□□ 2.87
PABPN1-206ENST00000556809 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.95■■■□□ 2.87
PABPN1-206ENST00000556809 PIK3C2GO75747 1445 aa32.94■■■□□ 2.86
PABPN1-206ENST00000556809 FAM135BQ49AJ0 1406 aa32.94■■■□□ 2.86
PABPN1-206ENST00000556809 PRAG1Q86YV5 1406 aa32.94■■■□□ 2.86
PABPN1-206ENST00000556809 NRXN1Q9ULB1 1477 aa32.93■■■□□ 2.86
PABPN1-206ENST00000556809 C19orf44Q9H6X5 657 aa32.92■■■□□ 2.86
PABPN1-206ENST00000556809 MYOM2P54296 1465 aa32.92■■■□□ 2.86
PABPN1-206ENST00000556809 PTCH1Q13635 1447 aa32.89■■■□□ 2.86
PABPN1-206ENST00000556809 ROBO1Q9Y6N7 1651 aa32.88■■■□□ 2.85
PABPN1-206ENST00000556809 C14orf37Q86TY3 774 aa32.88■■■□□ 2.85
PABPN1-206ENST00000556809 SLAIN2Q9P270 581 aa32.87■■■□□ 2.85
PABPN1-206ENST00000556809 ASXL1Q8IXJ9 1541 aa32.87■■■□□ 2.85
PABPN1-206ENST00000556809 DHX57Q6P158 1386 aaKnown RBP32.85■■■□□ 2.85
PABPN1-206ENST00000556809 ROBO2Q9HCK4 1378 aa32.85■■■□□ 2.85
PABPN1-206ENST00000556809 DCCP43146 1447 aa32.84■■■□□ 2.85
PABPN1-206ENST00000556809 CADPS2Q86UW7 1296 aa32.83■■■□□ 2.85
PABPN1-206ENST00000556809 NALCNQ8IZF0 1738 aa32.82■■■□□ 2.85
PABPN1-206ENST00000556809 C14orf93Q9H972 538 aaKnown RBP32.82■■■□□ 2.84
PABPN1-206ENST00000556809 ADGRL3Q9HAR2 1447 aa32.82■■■□□ 2.84
PABPN1-206ENST00000556809 ATF3P18847 181 aa32.8■■■□□ 2.84
PABPN1-206ENST00000556809 TECPR2O15040 1411 aa32.79■■■□□ 2.84
PABPN1-206ENST00000556809 LAMC1P11047 1609 aa32.79■■■□□ 2.84
PABPN1-206ENST00000556809 LRPPRCP42704 1394 aaKnown RBP32.78■■■□□ 2.84
PABPN1-206ENST00000556809 TMEM132EQ6IEE7 984 aa32.77■■■□□ 2.84
PABPN1-206ENST00000556809 KNDC1Q76NI1 1749 aa32.77■■■□□ 2.84
PABPN1-206ENST00000556809 ABCC11Q96J66 1382 aa32.75■■■□□ 2.83
PABPN1-206ENST00000556809 CFAP70Q5T0N1 1121 aa32.75■■■□□ 2.83
PABPN1-206ENST00000556809 DCAF11Q8TEB1 546 aa32.74■■■□□ 2.83
PABPN1-206ENST00000556809 STAC3Q96MF2 364 aa32.74■■■□□ 2.83
PABPN1-206ENST00000556809 YTHDC2Q9H6S0 1430 aaKnown RBP32.73■■■□□ 2.83
PABPN1-206ENST00000556809 MST1RQ04912 1400 aa32.72■■■□□ 2.83
PABPN1-206ENST00000556809 STK26Q9P289 416 aa32.7■■■□□ 2.83
PABPN1-206ENST00000556809 KDM2AQ9Y2K7 1162 aa32.69■■■□□ 2.82
PABPN1-206ENST00000556809 ADGRB1O14514 1584 aa32.66■■■□□ 2.82
PABPN1-206ENST00000556809 PHLPP1O60346 1717 aa32.66■■■□□ 2.82
PABPN1-206ENST00000556809 SIRT1Q96EB6 747 aa32.65■■■□□ 2.82
PABPN1-206ENST00000556809 BRINP3Q76B58 766 aa32.64■■■□□ 2.82
PABPN1-206ENST00000556809 WAPLQ7Z5K2 1190 aa32.64■■■□□ 2.82
PABPN1-206ENST00000556809 AHDC1Q5TGY3 1603 aaPredicted RBP32.63■■■□□ 2.81
PABPN1-206ENST00000556809 PLEKHH1Q9ULM0 1364 aa32.63■■■□□ 2.81
PABPN1-206ENST00000556809 DISP3Q9P2K9 1392 aa32.62■■■□□ 2.81
PABPN1-206ENST00000556809 COL16A1Q07092 1604 aaPredicted RBP32.62■■■□□ 2.81
PABPN1-206ENST00000556809 MED1Q15648 1581 aaPredicted RBP32.62■■■□□ 2.81
PABPN1-206ENST00000556809 CDC42BPGQ6DT37 1551 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms