RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 RIMS2Q9UQ26 1411 aa18.01■□□□□ 0.47
ABCD4-225ENST00000556517 SLIT1O75093 1534 aa18■□□□□ 0.47
ABCD4-225ENST00000556517 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
ABCD4-225ENST00000556517 STAC3Q96MF2 364 aa18■□□□□ 0.47
ABCD4-225ENST00000556517 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
ABCD4-225ENST00000556517 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
ABCD4-225ENST00000556517 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
ABCD4-225ENST00000556517 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
ABCD4-225ENST00000556517 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
ABCD4-225ENST00000556517 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
ABCD4-225ENST00000556517 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
ABCD4-225ENST00000556517 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
ABCD4-225ENST00000556517 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
ABCD4-225ENST00000556517 MYOM2P54296 1465 aa17.96■□□□□ 0.47
ABCD4-225ENST00000556517 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
ABCD4-225ENST00000556517 PPLO60437 1756 aa17.95■□□□□ 0.46
ABCD4-225ENST00000556517 HSPA2P54652 639 aa17.95■□□□□ 0.46
ABCD4-225ENST00000556517 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-225ENST00000556517 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-225ENST00000556517 BCANQ96GW7 911 aa17.94■□□□□ 0.46
ABCD4-225ENST00000556517 IFT172Q9UG01 1749 aa17.94■□□□□ 0.46
ABCD4-225ENST00000556517 LTKP29376 864 aa17.91■□□□□ 0.46
ABCD4-225ENST00000556517 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
ABCD4-225ENST00000556517 POLR1AO95602 1720 aaPredicted RBP17.9■□□□□ 0.46
ABCD4-225ENST00000556517 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
ABCD4-225ENST00000556517 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
ABCD4-225ENST00000556517 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.45
ABCD4-225ENST00000556517 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
ABCD4-225ENST00000556517 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
ABCD4-225ENST00000556517 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
ABCD4-225ENST00000556517 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
ABCD4-225ENST00000556517 MED14O60244 1454 aa17.86■□□□□ 0.45
ABCD4-225ENST00000556517 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
ABCD4-225ENST00000556517 LAMC1P11047 1609 aa17.85■□□□□ 0.45
ABCD4-225ENST00000556517 IQGAP1P46940 1657 aa17.85■□□□□ 0.45
ABCD4-225ENST00000556517 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
ABCD4-225ENST00000556517 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
ABCD4-225ENST00000556517 SLC26A8Q96RN1 970 aa17.81■□□□□ 0.44
ABCD4-225ENST00000556517 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
ABCD4-225ENST00000556517 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
ABCD4-225ENST00000556517 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
ABCD4-225ENST00000556517 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
ABCD4-225ENST00000556517 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 RALGAPBQ86X10 1494 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
ABCD4-225ENST00000556517 TRPM1Q7Z4N2 1603 aa17.78■□□□□ 0.44
ABCD4-225ENST00000556517 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
ABCD4-225ENST00000556517 CARD11Q9BXL7 1154 aa17.74■□□□□ 0.43
ABCD4-225ENST00000556517 METP08581 1390 aa17.74■□□□□ 0.43
ABCD4-225ENST00000556517 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
ABCD4-225ENST00000556517 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
ABCD4-225ENST00000556517 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
ABCD4-225ENST00000556517 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
ABCD4-225ENST00000556517 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
ABCD4-225ENST00000556517 GPRASP1Q5JY77 1395 aa17.71■□□□□ 0.43
ABCD4-225ENST00000556517 ASXL1Q8IXJ9 1541 aa17.71■□□□□ 0.43
ABCD4-225ENST00000556517 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
ABCD4-225ENST00000556517 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
ABCD4-225ENST00000556517 STK26Q9P289 416 aa17.7■□□□□ 0.42
ABCD4-225ENST00000556517 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
ABCD4-225ENST00000556517 KCNA6P17658 529 aa17.67■□□□□ 0.42
ABCD4-225ENST00000556517 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
ABCD4-225ENST00000556517 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
ABCD4-225ENST00000556517 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
ABCD4-225ENST00000556517 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
ABCD4-225ENST00000556517 TECPR2O15040 1411 aa17.65■□□□□ 0.42
ABCD4-225ENST00000556517 PTPRUQ92729 1446 aa17.65■□□□□ 0.42
ABCD4-225ENST00000556517 XRN1Q8IZH2 1706 aaKnown RBP17.65■□□□□ 0.42
ABCD4-225ENST00000556517 USP47Q96K76 1375 aa17.65■□□□□ 0.42
ABCD4-225ENST00000556517 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
ABCD4-225ENST00000556517 KNDC1Q76NI1 1749 aa17.64■□□□□ 0.41
ABCD4-225ENST00000556517 CPS1P31327 1500 aa17.64■□□□□ 0.41
ABCD4-225ENST00000556517 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
ABCD4-225ENST00000556517 POGKQ9P215 609 aa17.64■□□□□ 0.41
ABCD4-225ENST00000556517 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
ABCD4-225ENST00000556517 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
ABCD4-225ENST00000556517 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
ABCD4-225ENST00000556517 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
ABCD4-225ENST00000556517 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
ABCD4-225ENST00000556517 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
ABCD4-225ENST00000556517 SIRT1Q96EB6 747 aa17.6■□□□□ 0.41
ABCD4-225ENST00000556517 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
ABCD4-225ENST00000556517 ARHGEF28Q8N1W1 1705 aaKnown RBP17.59■□□□□ 0.41
ABCD4-225ENST00000556517 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
ABCD4-225ENST00000556517 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
ABCD4-225ENST00000556517 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
ABCD4-225ENST00000556517 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
ABCD4-225ENST00000556517 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
ABCD4-225ENST00000556517 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
ABCD4-225ENST00000556517 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
ABCD4-225ENST00000556517 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
ABCD4-225ENST00000556517 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
ABCD4-225ENST00000556517 STRCP1A6NGW2 1772 aa17.54■□□□□ 0.4
ABCD4-225ENST00000556517 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
ABCD4-225ENST00000556517 NCOA3Q9Y6Q9 1424 aa17.54■□□□□ 0.4
ABCD4-225ENST00000556517 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms